Search Geneontologies

Geneontologies

GO ID Ontology GO Term Term Definition Proteins

GO:0097105

BP

presynaptic membrane assembly

The aggregation, arrangement and bonding together of a set of components to form a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.

PTPRD, PTEN, NLGN4X, NLGN1

GO:0097107

BP

postsynaptic density assembly

The aggregation, arrangement and bonding together of a set of components to form a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse.

PTEN

GO:0097111

BP

endoplasmic reticulum-Golgi intermediate compartment organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER)-Golgi intermediate compartment.

GBF1

GO:0097112

BP

gamma-aminobutyric acid receptor clustering

The receptor clustering process in which gamma-aminobutyric acid (GABA) receptors are localized to distinct domains in the cell membrane.

GLRB, GPHN

GO:0097113

BP

AMPA glutamate receptor clustering

The glutamate receptor clustering process in which alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate (AMPA) receptors are localized to distinct domains in the cell membrane.

APOE, DLG4, NLGN1

GO:0097114

BP

NMDA glutamate receptor clustering

The receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane.

APOE, NLGN1

GO:0097115

BP

neurexin clustering involved in presynaptic membrane assembly

The receptor clustering process involved in assembly of the presynaptic membrane in which neurexins are localized to distinct domains in the cell membrane. Neurexins are synaptic cell surface proteins which act as cell recognition molecules at nerve terminals.

NLGN1

GO:0097116

BP

gephyrin clustering involved in postsynaptic density assembly

The clustering process in which gephyrin molecules are localized to distinct domains in the postsynaptic density as part of postsynaptic density assembly. Gephyrin is a component of the postsynaptic protein network of inhibitory synapses.

NRXN1

GO:0097118

BP

neuroligin clustering involved in postsynaptic membrane assembly

The receptor clustering process involved in assembly of the postsynaptic membrane in which neuroligins are localized to distinct domains in the cell membrane. Neuroligins are neuronal cell surface proteins on the postsynaptic membrane that mediate synapse formation between neurons.

CDH2, MAGI2, NRXN1

GO:0097119

BP

postsynaptic density protein 95 clustering

The clustering process in which postsynaptic density protein 95 (PSD-95) molecules are localized to distinct domains in the cell membrane. PSD-95 is mostly located in the post synaptic density of neurons, and is involved in anchoring synaptic proteins.

NLGN1, NRXN1

GO:0097120

BP

receptor localization to synapse

Any process in which a receptor is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.

DLG4, DLG1, NLGN1

GO:0097150

BP

neuronal stem cell population maintenance

Any process in by an organism or tissue maintains a population of neuronal stem cells.

FOXO3, CDH2, NOTCH1, JAG1, FOXO1, HES1, PCM1, HOOK3, ASPM, PROX1, FANCD2, MMP24

GO:0097151

BP

positive regulation of inhibitory postsynaptic potential

Any process that activates or increases the frequency, rate or extent of inhibitory postsynaptic potential (IPSP). IPSP is a temporary decrease in postsynaptic membrane potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential.

ABAT, IGSF9B, RIMS2

GO:0097152

BP

mesenchymal cell apoptotic process

Any apoptotic process in a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.

TBX1

GO:0097154

BP

GABAergic neuron differentiation

The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic neuron.

INHBA

GO:0097155

BP

fasciculation of sensory neuron axon

The collection of sensory neuron axons into a bundle of rods, known as a fascicle.

EPHA3, EPHA4

GO:0097156

BP

fasciculation of motor neuron axon

The collection of motor neuron axons into a bundle of rods, known as a fascicle.

EPHA3, EPHA4

GO:0097167

BP

circadian regulation of translation

Any process that modulates the frequency, rate or extent of mRNA translation with a regularity of approximately 24 hours.

PER1, HNRNPD, RBM4

GO:0097178

BP

ruffle assembly

The aggregation, arrangement and bonding together of a set of components to form a ruffle, a projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork. The formation of ruffles (also called membrane ruffling) is thought to be controlled by a group of enzymes known as Rho GTPases, specifically RhoA, Rac1 and cdc42.

RAC1, ARHGEF26, INPP5K

GO:0097186

BP

amelogenesis

The process whose specific outcome is the formation of tooth enamel, occurring in two stages: secretory stage and maturation stage.

ITGB4, ITGA6, PERP, CSF3R

GO:0097187

BP

dentinogenesis

The process whose specific outcome is the formation of dentin, the mineralized tissue that constitutes the major bulk of teeth. Dentin may be one of three types: primary dentin, secondary dentin, and tertiary dentin.

FAM20C, HTRA1

GO:0097190

BP

apoptotic signaling pathway

A series of molecular signals which triggers the apoptotic death of a cell. The pathway starts with reception of a signal, and ends when the execution phase of apoptosis is triggered.

DAPL1, TLR4, HIP1, TNFRSF11B, TLR3, DAPK3, PDCD6, TNFRSF21, ANXA6, NGFR, CD14, CD28, PRKCA, TNFRSF1B, FAS, TNFRSF8, ADORA1, IFI27, DAP, DAP3, DAPK1, CAV1, PPARD, BAX, FADD, RIPK1, FASTK, CASP8, PTGIS, TNFRSF25, MOAP1, PAWR, P2RX4, MAP3K5, DIDO1, TM2D1, UACA, NDUFA13, TNFRSF11A

GO:0097191

BP

extrinsic apoptotic signaling pathway

A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with either a ligand binding to a cell surface receptor, or a ligand being withdrawn from a cell surface receptor (e.g. in the case of signaling by dependence receptors), and ends when the execution phase of apoptosis is triggered.

SIVA1, TLR3, JAK2, IL33, TGFB1, TNF, KRT18, KRT8, INHBA, IL6R, TNFRSF1B, FAS, CD27, G0S2, IL12A, ACVR1B, TGFB2, SMAD3, BAX, MLLT11, FADD, RIPK1, CASP8, TRADD, BAD, CIB1, TNFRSF12A, NDUFA13, PARP2

GO:0097192

BP

extrinsic apoptotic signaling pathway in absence of ligand

A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with withdrawal of a ligand from a cell surface receptor, and ends when the execution phase of apoptosis is triggered.

EYA2, BCL2L11, FOXO3, IL1A, IL1B, ITGAV, BCL2, KITLG, ERBB3, FAS, GSK3B, CASP9, BAX, MCL1, FADD, BCL2L2, BAD, MOAP1, MKNK2, BOK

GO:0097193

BP

intrinsic apoptotic signaling pathway

A series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway starts with reception of an intracellular signal (e.g. DNA damage, endoplasmic reticulum stress, oxidative stress etc.), and ends when the execution phase of apoptosis is triggered. The intrinsic apoptotic signaling pathway is crucially regulated by permeabilization of the mitochondrial outer membrane (MOMP).

DDX3X, NBN, NOL3, TP53, CD24, CDKN1A, PPM1F, CASP4, MSH6, CYCS, BAX, MLLT11, CUL2, CUL3, CUL4A, PMAIP1, BAD, CUL5, LGALS12, APOPT1, BBC3, HIPK2

GO:0097194

BP

execution phase of apoptosis

A stage of the apoptotic process that starts with the controlled breakdown of the cell through the action of effector caspases or other effector molecules (e.g. cathepsins, calpains etc.). Key steps of the execution phase are rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.

CFLAR, AKT1, CASP8, STK24

GO:0097195

BP

pilomotor reflex

The reflex process in which the arrectores pilorum (hair follicle) muscles contract and cause the hair to stand erect.

ADRA1A

GO:0097201

BP

negative regulation of transcription from RNA polymerase II promoter in response to stress

Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).

IMPACT

GO:0097202

BP

activation of cysteine-type endopeptidase activity

Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase.

ASPH, FADD, CASP8, IFI16, BAD, CYFIP2, PERP, PYCARD

GO:0097205

BP

renal filtration

A renal system process in which fluid circulating through the body is filtered through a barrier system.

ITGA3

GO:0097211

BP

cellular response to gonadotropin-releasing hormone

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gonadotropin-releasing hormone stimulus. Gonadotropin-releasing hormone (GnRH) is a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.

GNRHR, MGARP

GO:0097212

BP

lysosomal membrane organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lysosomal membrane. A lysosomal membrane is the lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.

ARF1

GO:0097214

BP

positive regulation of lysosomal membrane permeability

Any process that increases the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.

MT3

GO:0097222

BP

mitochondrial mRNA polyadenylation

The enzymatic addition of a sequence of 40-60 adenylyl residues at the 3' end of a eukaryotic mitochondrial mRNA primary transcript. Mitochondria contain both stabilizing and destabilizing poly(A) tails.

PNPT1

GO:0097237

BP

cellular response to toxic substance

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.

PARK2, ABTB2, PINK1

GO:0097238

BP

cellular response to methylglyoxal

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylglyoxal stimulus. Methylglyoxal is a 2-oxoaldehyde derived from propanal.

AKR1B1

GO:0097241

BP

hematopoietic stem cell migration to bone marrow

The orderly movement of a hematopoietic stem cell into the bone marrow, and its subsequent positioning within defined functional compartments in that microenvironment. A hematopoietic stem cell is a cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.

GPLD1, GAS6

GO:0097252

BP

oligodendrocyte apoptotic process

Any apoptotic process in an oligodendrocyte. Oligodendrocytes belong to a class of large neuroglial (macroglial) cells in the central nervous system, where they form the insulating myelin sheath of axons.

TNFRSF21, TP53

GO:0097264

BP

self proteolysis

The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.

CAPN3, TENM4, TMPRSS6, TENM3

GO:0097267

BP

omega-hydroxylase P450 pathway

The chemical reactions and pathways by which arachidonic acid is converted to other compounds initially by omega-hydroxylation.

CYP1A1, CYP2C9, CYP1B1, CYP2U1

GO:0097274

BP

urea homeostasis

Any biological process involved in the maintenance of an internal steady state of urea.

SLC25A23

GO:0097278

BP

complement-dependent cytotoxicity

Lysis of a cell resulting from triggering of the complement cascade. An example can be seen with complement activation and subsequent lysis of a bacterial cell as a result of the binding of IgM to the cell surface followed by the binding of complement proteins to that antibody.

RAB27A

GO:0097284

BP

hepatocyte apoptotic process

Any apoptotic process in a hepatocyte, the main structural component of the liver.

KRT18, KRT8, RB1, FAS, PIK3CG, BID, STK4

GO:0097286

BP

iron ion import

The directed movement of iron ions into a cell or organelle.

TFRC, MFI2

GO:0097296

BP

activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway

Any process that initiates the activity of an inactive cysteine-type endopeptidase involved in the apoptotic signaling pathway.

JAK2, FAS, TNFSF10, SMAD3, BAX, FADD, RIPK1, CASP8, TRADD

GO:0097300

BP

programmed necrotic cell death

A necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.

CASP1, MAP3K5

GO:0097310

BP

cap2 mRNA methylation

Methylation of the ribose of the first and second nucleotides of a 5'-capped mRNA.

CMTR2

GO:0097320

BP

membrane tubulation

A modification in a plasma membrane resulting in formation of a tubular invagination.

FNBP1L, SNX33, PACSIN1, BIN2, SNX9

GO:0097324

BP

melanocyte migration

The orderly movement of melanocytes from one site to another, often during the development of a multicellular organism. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.

ZEB2, KIT

GO:0097325

BP

melanocyte proliferation

The multiplication or reproduction of melanocytes, resulting in the expansion of a cell population. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.

WNT5A

GO:0097326

BP

melanocyte adhesion

The attachment of a melanocyte to another cell via adhesion molecules.

KIT

GO:0097327

BP

response to antineoplastic agent

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antineoplastic agent stimulus. An antineoplastic agent is a substance that inhibits or prevents the proliferation of neoplasms.

RAP1A

GO:0097332

BP

response to antipsychotic drug

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antipsychotic drug stimulus. Antipsychotic drugs are agents that control agitated psychotic behaviour, alleviate acute psychotic states, reduce psychotic symptoms, and exert a quieting effect.

PRKAR2B

GO:0097338

BP

response to clozapine

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a clozapine stimulus.

PRKAR2B

GO:0097343

BP

ripoptosome assembly

The aggregation, arrangement and bonding together of a set of components to form a ripoptosome, a protein complex whose formation can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.

RIPK1

GO:0097345

BP

mitochondrial outer membrane permeabilization

The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of the apoptotic signaling pathway.

EYA2, BNIP3L, BID, BNIP3

GO:0097350

BP

neutrophil clearance

The selective elimination of senescent neutrophils from the body by autoregulatory mechanisms.

ANXA1, HMGB1

GO:0097352

BP

autophagosome maturation

The process in which autophagosomes, double-membraned vacuoles containing cytoplasmic material fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. Fusion provides an acidic environment and digestive function to the interior of the autophagosome.

SNAPIN, SNAP29, VCP, CLN3, TECPR1, EPG5

GO:0097359

BP

UDP-glucosylation

The covalent attachment of a UDP-glucose residue to a substrate molecule.

UGGT1

GO:0097368

BP

establishment of Sertoli cell barrier

Establishment of a structure near the basement membrane in adjacent Sertoli cells of the seminiferous epithelium for maintaining spermatogenesis. The structure consists of tight junctions, basal ectoplasmic specializations, and desmosome-like junctions.

ICAM1, ARID4B

GO:0097374

BP

sensory neuron axon guidance

The process in which the migration of an axon growth cone of a sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A sensory neuron is an afferent neuron conveying sensory impulses.

NRP1

GO:0097403

BP

cellular response to raffinose

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a raffinose stimulus.

ZFP36L1

GO:0097411

BP

hypoxia-inducible factor-1alpha signaling pathway

A series of molecular signals mediated by hypoxia-inducible factor (HIF1) in response to lowered oxygen levels (hypoxia). Under hypoxic conditions, the oxygen-sensitive alpha-subunit of hypoxia-inducible factor (HIF)-1 dimerizes with a HIF1-beta subunit (also called ARNT or aryl-hydrocarbon-receptor nuclear translocator), translocates to the nucleus and activates transcription of genes whose products participate in responding to hypoxia.

CYBB, PDK1, HIF1A

GO:0097421

BP

liver regeneration

The regrowth of lost or destroyed liver.

EGFR, TGFB1, VTN, TYMS, HMOX1, PCNA, CEBPB, IL10, UCP2, RPS16, RAP1A, RPL32, HAMP, RPL19, SRSF1, SRSF5, RGN, EZH2, HFE, SULF2, CPB2

GO:0097428

BP

protein maturation by iron-sulfur cluster transfer

The transfer of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.

ISCA1

GO:0097435

BP

fibril organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of fibrils, insoluble fibrous aggregates consisting of polysaccharides and/or proteins.

HSP90AB1

GO:0097459

BP

iron ion import into cell

The directed movement of iron ions from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.

PICALM, HFE

GO:0097460

BP

ferrous iron import into cell

The directed movement of ferrous iron (Fe(II) or Fe2+) ions from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.

TF, TFR2

GO:0097461

BP

ferric iron import into cell

The directed movement of ferric iron (Fe(III) or Fe3+) ions from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.

STEAP4

GO:0097466

BP

glycoprotein ERAD pathway

An ERAD pathway whereby endoplasmic reticulum (ER)-resident glycoproteins are targeted for degradation. Includes differential processing of the glycoprotein sugar chains, retrotranslocation to the cytosol and degradation by the ubiquitin-proteasome pathway. A glycoprotein is a compound in which a carbohydrate component is covalently bound to a protein component.

EDEM1

GO:0097477

BP

lateral motor column neuron migration

The orderly movement of a lateral motor column neuron from one site to another. A lateral motor column neuron is a motor neuron that is generated only on limb levels and send axons into the limb mesenchyme.

DAB1

GO:0097484

BP

dendrite extension

Long distance growth of a single dendrite involved in cellular development.

STK11, SLC9A6, LLPH

GO:0097485

BP

neuron projection guidance

The process in which the migration of a neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues.

DPYSL4

GO:0097490

BP

sympathetic neuron projection extension

Long distance growth of a single sympathetic neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.

NRP1, NRP2, SEMA3A

GO:0097491

BP

sympathetic neuron projection guidance

The process in which the migration of a sympathetic neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues.

NRP1, NRP2, SEMA3A

GO:0097494

BP

regulation of vesicle size

Any process that modulates the size of a vesicle.

RAB3B, RAB22A

GO:0097497

BP

blood vessel endothelial cell delamination

The process of negative regulation of cell adhesion that results in blood vessel endothelial cells splitting off from an existing endothelial sheet.

TRPV4

GO:0097498

BP

endothelial tube lumen extension

Any endothelial tube morphogenesis process by which the tube is increased in length.

RHOA, STARD13

GO:0097500

BP

receptor localization to nonmotile primary cilium

A process in which a receptor is transported to, or maintained in, a location within a nonmotile primary cilium.

BBIP1, TULP3

GO:0097502

BP

mannosylation

The covalent attachment of a mannose residue to a substrate molecule.

ALG8, ALG9

GO:0097503

BP

sialylation

The covalent attachment of sialic acid to a substrate molecule.

ST6GAL1, ST8SIA6, ST3GAL1, ST3GAL3, ST3GAL4, ST3GAL2, ST8SIA4, ST6GAL2, ST6GALNAC5, ST6GALNAC4, ST6GALNAC2, ST3GAL6

GO:0097510

BP

base-excision repair, AP site formation via deaminated base removal

A base-excision repair, AP site formation process occurring via excision of a deaminated base.

UNG

GO:0097527

BP

necroptotic signaling pathway

A series of molecular signals which triggers the necroptotic death of a cell. The pathway starts with reception of a signal, is characterized by activation of receptor-interacting serine/threonine-protein kinase 1 and/or 3 (RIPK1/3, also called RIP1/3), and ends when the execution phase of necroptosis is triggered.

TLR3, TNF, FAS, FADD, RIPK1

GO:0097531

BP

mast cell migration

The movement of a mast cell within or between different tissues and organs of the body.

MITF, STAT5B

GO:0097553

BP

calcium ion transmembrane import into cytosol

A process in which a calcium ion is transported from one side of a membrane to the other into the cytosol by means of some agent such as a transporter or pore.

ATP2B4

GO:0097581

BP

lamellipodium organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lamellipodium. A lamellipodium is a thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments.

CTTN

GO:0097623

BP

potassium ion export across plasma membrane

The directed movement of potassium ions from inside of a cell, across the plasma membrane and into the extracellular region.

KCNH2

GO:0097638

BP

L-arginine import across plasma membrane

The directed movement of L-arginine from outside of a cell, across the plasma membrane and into the cytosol.

SLC7A2

GO:0097639

BP

L-lysine import across plasma membrane

The directed movement of L-lysine from outside of a cell, across the plasma membrane and into the cytosol.

SLC7A2

GO:0097640

BP

L-ornithine import across plasma membrane

The directed movement of L-ornithine from outside of a cell, across the plasma membrane and into the cytosol.

SLC7A2

GO:0097676

BP

histone H3-K36 dimethylation

The modification of histone H3 by addition of two methyl groups to lysine at position 36 of the histone.

ASH1L

GO:0097681

BP

double-strand break repair via alternative nonhomologous end joining

An instance of double-strand break repair via nonhomologous end joining that is independent of factors important for V(D)J recombination (as opposed to classical nonhomologous end joining). It often results in a deletion with microhomology (i.e. 5-25bp homology) at the repair junction. Among different subclasses of nonhomologous end joining (NHEJ), alternative NHEJ appears to play a significant role in the etiology of mutations that arise during cancer development and treatment.

POLQ, PRKDC

GO:0098507

BP

polynucleotide 5' dephosphorylation

The process of removing one or more phosphate groups from the 5' end of a polynucleotide.

DUSP11

GO:0098532

BP

histone H3-K27 trimethylation

The modification of histone H3 by addition of three methyl groups to lysine at position 27 of the histone.

HIST1H1E, HIST1H1C, EZH2

GO:0098535

BP

de novo centriole assembly

Centriole assembly in which a centriole arises de novo by a process involving an electron dense structure known as a deuterosome, rather than by duplication of an existing centriole.

PLK4, CEP152

GO:0098586

BP

cellular response to virus

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.

PENK, IL12A, FMR1, MAPK14, TRIM6

GO:0098609

BP

cell-cell adhesion

The attachment of one cell to another cell via adhesion molecules.

ESYT2, PDLIM1, SDCBP, NOP56, DDX3X, CCS, PPL, EXOC3, FLNB, IDH1, RSL1D1, CCNB2, VAPB, LYPLA2, LDHA, ALDOA, KRT18, ENO1, ANXA2, PFN1, SLC3A2, HSP90AB1, HSPA1A, HSPA1B, HSPA5, EEF2, PKM, RPS2, EPCAM, CAST, PCMT1, PAICS, DNAJB1, S100P, EEF1D, PRDX6, YWHAB, SFN, S100A11, RDX, BSG, TAGLN2, CAPG, EIF2S3, TMPO, TMPO, EPS15, RANBP1, RANGAP1, CRKL, IQGAP1, CAPZB, RPL29, CSNK1D, RPL34, FASN, NUMB, MRE11A, EMD, RPL14, CCT8, CAPZA1, ARFIP1, IST1, RARS, EIF5, RPL15, YWHAE, RPL7A, RPL23A, RAB1A, RPS26, YWHAZ, RACK1, HIST1H3D, RPL24, HDLBP, SPTBN1, CALD1, PRDX1, TJP1, GOLGA2, AHNAK, TWF1, PAK2, PICALM, SNX1, CKAP5, CTTN, TRIM25, SEPT2, STK38, PCBP1, CNN3, MAPRE1, RAB11B, SEPT7, PKN2, DBN1, FSCN1, LRRFIP1, COBLL1, FNBP1L, ARHGEF16, TWF2, LARP1, MPRIP, GIGYF2, BZW1, DHX29, PHLDB2, KTN1, ERC1, ABI1, ARHGAP18, SERBP1, GPRC5A, STXBP6, KIAA1524, ZC3H15, PPP1R13L, ATXN2L, H1FX, NDRG1, GCN1, EFHD2, PERP, PDLIM5, SCYL1, FMNL2, FAM129B, TMEM47, CORO1B, EHD4, CHMP4B, EPB41L1, ADGRL3, RTN4, ANLN, DIAPH3, ARGLU1, FLRT3, VAPA, TJP2, TES, LIMA1, BAIAP2L1, PUF60, ASAP1, MKL2, MYO6, MACF1, RUVBL1, SH3GLB1, PPME1, MMP24, SNX9, SNX5, F11R, STK24, BZW2, WASF2

GO:0098655

BP

cation transmembrane transport

A process in which a cation is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.

SLC22A5, CHRNB1, CHRNA5, CHRNA7, ATP13A5, FAM26F, SLC30A9, PIEZO1, SLC41A3, SLC41A2, P2RX4, ATP13A3, CALHM2, ATP13A2, GAR1

GO:0098656

BP

anion transmembrane transport

A process in which an anion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.

ABCC4, ABCC5, ABCA1, ABCC1, SLC4A8, ABCC10, LRRC8B, LRRC8A, LRRC8C, SLC5A5, SLC4A4

GO:0098700

BP

neurotransmitter loading into synaptic vesicle

The active transport of neurotransmitters into a synaptic vesicle. This import is fuelled by an electrochemical gradient across the vesicle membrane, established by the action proton pumps.

SLC18A2