Gene Symbol | RAPGEF1 |
Entrez ID | 2889 |
Uniprot ID | Q13905 |
Description | Rap guanine nucleotide exchange factor 1 |
Chromosomal Location | chr9: 131,576,770-131,740,074 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0000186 |
activation of MAPKK activity |
The initiation of the activity of the inactive enzyme MAP kinase kinase (MAPKK). |
TAS |
BP |
GO:0001568 |
blood vessel development |
The process whose specific outcome is the progression of a blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood. |
IEA |
BP |
GO:0007165 |
signal transduction |
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
NAS |
BP |
GO:0007169 |
transmembrane receptor protein tyrosine kinase signaling pathway |
A series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell where the receptor possesses tyrosine kinase activity, and ending with regulation of a downstream cellular process, e.g. transcription. |
TAS |
BP |
GO:0010976 |
positive regulation of neuron projection development |
Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). |
IMP |
BP |
GO:0016337 |
single organismal cell-cell adhesion |
The attachment of one cell to another cell via adhesion molecules, where both cells are part of the same organism. |
IEA |
BP |
GO:0032486 |
Rap protein signal transduction |
A series of molecular signals within the cell that are mediated by a member of the Rap family of proteins switching to a GTP-bound active state. |
IMP |
BP |
GO:0038180 |
nerve growth factor signaling pathway |
A series of molecular signals initiated by the binding of nerve growth factor (NGF) to a receptor on the surface of the target cell, and ending with regulation of a downstream cellular process, e.g. transcription. |
IDA |
BP |
GO:0043547 |
positive regulation of GTPase activity |
Any process that activates or increases the activity of a GTPase. |
IDA|IMP |
BP |
GO:0046580 |
negative regulation of Ras protein signal transduction |
Any process that stops, prevents, or reduces the frequency, rate or extent of Ras protein signal transduction. |
IEA |
BP |
GO:0048008 |
platelet-derived growth factor receptor signaling pathway |
The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands. |
IEA |
BP |
GO:0051898 |
negative regulation of protein kinase B signaling |
Any process that stops, prevents, or reduces the frequency, rate or extent of protein kinase B signaling, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B. |
IEA |
BP |
GO:0061028 |
establishment of endothelial barrier |
The establishment of a barrier between endothelial cell layers, such as those in the brain, lung or intestine, to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition. |
IMP |
BP |
GO:0070373 |
negative regulation of ERK1 and ERK2 cascade |
Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade. |
IEA |
BP |
GO:0071320 |
cellular response to cAMP |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus. |
IDA |
BP |
GO:0090090 |
negative regulation of canonical Wnt signaling pathway |
Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. |
IEA |
BP |
GO:1901888 |
regulation of cell junction assembly |
Any process that modulates the frequency, rate or extent of cell junction assembly. |
IMP |
BP |
GO:1990090 |
cellular response to nerve growth factor stimulus |
A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus. |
IDA |
BP |
GO:2000178 |
negative regulation of neural precursor cell proliferation |
Any process that stops, prevents, or reduces the frequency, rate or extent of neural precursor cell proliferation. |
IEA |
CC |
GO:0005768 |
endosome |
A vacuole to which materials ingested by endocytosis are delivered. |
TAS |
CC |
GO:0005769 |
early endosome |
A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways. |
IDA |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
TAS |
MF |
GO:0005515 |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IPI |
MF |
GO:0017034 |
Rap guanyl-nucleotide exchange factor activity |
Stimulates the exchange of guanyl nucleotides associated with a GTPase of the Rap family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase. |
IDA|IMP |
MF |
GO:0017124 |
SH3 domain binding |
Interacting selectively and non-covalently with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins. |
IEA |
Domain ID | Description |
---|---|
IPR000651 |
Ras-like guanine nucleotide exchange factor, N-terminal |
IPR001895 |
Ras guanine-nucleotide exchange factors catalytic domain |
IPR019804 |
Ras guanine-nucleotide exchange factor, conserved site |
IPR023578 |
Ras guanine nucleotide exchange factor domain |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa04015 |
Rap1 signaling pathway |
KEGG |
hsa04510 |
Focal adhesion |
KEGG |
hsa04722 |
Neurotrophin signaling pathway |
KEGG |
hsa04910 |
Insulin signaling pathway |
KEGG |
hsa05211 |
Renal cell carcinoma |
KEGG |
WP23 |
B Cell Receptor Signaling Pathway |
WikiPathways |
WP3915 |
Angiopoietin Like Protein 8 Regulatory Pathway |
WikiPathways |
WP313 |
Signaling of Hepatocyte Growth Factor Receptor |
WikiPathways |
WP306 |
Focal Adhesion |
WikiPathways |
WP585 |
Interferon type I signaling pathways |
WikiPathways |
WP481 |
Insulin Signaling |
WikiPathways |
WP185 |
Integrin-mediated Cell Adhesion |
WikiPathways |
WP286 |
IL-3 Signaling Pathway |
WikiPathways |
WP3888 |
VEGFA-VEGFR2 Signaling Pathway |
WikiPathways |
h_integrinPathway |
Integrin Signaling Pathway |
BioCarta |
h_metPathway |
Signaling of Hepatocyte Growth Factor Receptor |
BioCarta |
Tissue | Cell Type |
---|---|
skeletal muscle |
myocytes |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
YES1 |
7525 |
P07947 |
0.00 |
HRAS |
3265 |
P01112 |
0.52 |
RRAS2 |
22800 |
P62070 |
0.52 |
RHOQ |
23433 |
P17081 |
0.52 |
FYN |
2534 |
P06241 |
0.63 |
NCK1 |
4690 |
P16333 |
0.63 |
PIK3R1 |
5295 |
P27986 |
0.63 |
RPS15 |
6209 |
P62841 |
0.63 |
SLC20A1 |
6574 |
Q8WUM9 |
0.63 |
NEDD9 |
4739 |
Q14511 |
0.84 |
ABL1 |
25 |
P00519 |
0.87 |
CRK |
1398 |
P46108 |
0.97 |
GRB2 |
2885 |
P62993 |
0.97 |
CBLB |
868 |
Q13191 |
0.00 |
GRAP2 |
9402 |
O75791 |
0.00 |
CBLC |
23624 |
Q9ULV8 |
0.00 |
RAP1B |
5908 |
P61224 |
0.55 |
CTLA4 |
1493 |
P16410 |
0.63 |
MOV10 |
4343 |
Q9HCE1 |
0.63 |
ATXN1 |
6310 |
P54253 |
0.63 |
SRC |
6714 |
P12931 |
0.63 |
NXF1 |
10482 |
Q9UBU9 |
0.63 |
MBIP |
51562 |
Q9NS73 |
0.63 |
SPATS2L |
26010 |
Q9NUQ6 |
0.72 |
CBL |
867 |
P22681 |
0.73 |
SHC1 |
6464 |
P29353 |
0.73 |
BCAR1 |
9564 |
P56945 |
0.79 |
EGFR |
1956 |
P00533 |
0.88 |
CRKL |
1399 |
P46109 |
0.90 |
HCK |
3055 |
P08631 |
0.96 |