Gene Symbol | DXO |
Entrez ID | 1797 |
Uniprot ID | O77932 |
Description | decapping exoribonuclease |
Chromosomal Location | chr6: 31,969,810-31,972,292 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006402 |
mRNA catabolic process |
The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes. |
ISS |
BP |
GO:0008152 |
metabolic process |
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. |
ISS |
BP |
GO:0050779 |
RNA destabilization |
Any process that decreases the stability of an RNA molecule, making it more vulnerable to degradative processes. |
ISS |
BP |
GO:0071028 |
nuclear mRNA surveillance |
The set of processes involved in identifying and degrading defective or aberrant mRNAs within the nucleus. |
ISS |
BP |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
The nucleic acid metabolic process in which the phosphodiester bonds between nucleotides are cleaved by hydrolysis. |
ISS |
CC |
GO:0005634 |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
IDA |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
CC |
GO:0005886 |
plasma membrane |
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
IDA |
MF |
GO:0000166 |
nucleotide binding |
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
IEA |
MF |
GO:0000287 |
magnesium ion binding |
Interacting selectively and non-covalently with magnesium (Mg) ions. |
ISS |
MF |
GO:0003729 |
mRNA binding |
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
ISS |
MF |
GO:0008409 |
5'-3' exonuclease activity |
Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end. |
ISS |
MF |
GO:0034353 |
RNA pyrophosphohydrolase activity |
Catalysis of the removal of a 5' terminal pyrophosphate from the 5'-triphosphate end of an RNA, leaving a 5'-monophosphate end. |
ISS |
Domain ID | Description |
---|---|
IPR013961 |
RAI1-like |
UMLS CUI | UMLS Term |
---|---|
C0086445 |
Idiopathic Membranous Glomerulonephritis |
Tissue | Cell Type |
---|---|
testis |
cells in seminiferous ducts |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
LOC389834 |
389834 |
N/A |
0.14 |
IGHA1 |
3493 |
P01876 |
0.63 |
IGHA2 |
3494 |
P01877 |
0.63 |
EXOSC10 |
5394 |
Q01780 |
0.63 |
UPF1 |
5976 |
Q92900 |
0.63 |
RECQL5 |
9400 |
O94762 |
0.63 |
XRN1 |
54464 |
Q8IZH2 |
0.63 |
ARMC5 |
79798 |
Q96C12 |
0.63 |
RPAP2 |
79871 |
Q8IXW5 |
0.63 |
FLOT2 |
2319 |
Q14254 |
0.73 |
XRN2 |
22803 |
Q9H0D6 |
0.73 |
EXOSC7 |
23016 |
Q15024 |
0.73 |
DXO |
1797 |
O77932 |
0.79 |
RPRD1A |
55197 |
Q96P16 |
0.49 |
DCP2 |
167227 |
Q8IU60 |
0.63 |
PRMT6 |
55170 |
Q96LA8 |
0.72 |
EXOSC4 |
54512 |
Q9NPD3 |
0.73 |