Protein Description

Gene Symbol THOC3
Entrez ID 84321
Uniprot ID Q96J01
Description THO complex 3
Chromosomal Location chr5: 175,917,873-176,034,680
Ontology GO ID GO Term Definition Evidence

BP

GO:0006369

termination of RNA polymerase II transcription

The process in which the synthesis of an RNA molecule by RNA polymerase II using a DNA template is completed.

TAS

BP

GO:0006405

RNA export from nucleus

The directed movement of RNA from the nucleus to the cytoplasm.

TAS

BP

GO:0006406

mRNA export from nucleus

The directed movement of mRNA from the nucleus to the cytoplasm.

IDA|TAS

BP

GO:0008380

RNA splicing

The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.

IEA

BP

GO:0031124

mRNA 3'-end processing

Any process involved in forming the mature 3' end of an mRNA molecule.

TAS

BP

GO:0046784

viral mRNA export from host cell nucleus

The directed movement of intronless viral mRNA from the host nucleus to the cytoplasm for translation.

IDA

CC

GO:0000346

transcription export complex

The transcription export (TREX) complex couples transcription elongation by RNA polymerase II to mRNA export. The complex associates with the polymerase and travels with it along the length of the transcribed gene. TREX is composed of the THO transcription elongation complex as well as other proteins that couple THO to mRNA export proteins. The TREX complex is known to be found in a wide range of eukaryotes, including S. cerevisiae and metazoans.

IDA

CC

GO:0000445

THO complex part of transcription export complex

The THO complex when it is part of the TREX (TRanscription EXport) complex that is involved in coupling transcription to export of mRNAs to the cytoplasm. In S. cerevisiae, it is composed of four subunits: Hpr1, Tho2, Thp1, and Mft1, while the human complex is composed of 7 subunits.

IDA

CC

GO:0000784

nuclear chromosome, telomeric region

The terminal region of a linear nuclear chromosome that includes the telomeric DNA repeats and associated proteins.

IDA

CC

GO:0005654

nucleoplasm

That part of the nuclear content other than the chromosomes or the nucleolus.

TAS

CC

GO:0016607

nuclear speck

A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.

IEA

MF

GO:0003723

RNA binding

Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

IEA

Domain ID Description

IPR001680

WD40 repeat

IPR013979

Translation initiation factor, beta propellor-like domain

IPR015943

WD40/YVTN repeat-like-containing domain

IPR017986

WD40-repeat-containing domain

IPR020472

G-protein beta WD-40 repeat

IPR024977

Anaphase-promoting complex subunit 4, WD40 domain

Pathway ID Pathway Term Pathway Source

hsa03013

RNA transport

KEGG

hsa03040

Spliceosome

KEGG

No diseases found.

Tissue Cell Type

adrenal gland

glandular cells

appendix

glandular cells

bone marrow

hematopoietic cells

bronchus

respiratory epithelial cells

colon

glandular cells

duodenum

glandular cells

endometrium

glandular cells

epididymis

glandular cells

esophagus

squamous epithelial cells

gallbladder

glandular cells

kidney

cells in tubules

nasopharynx

respiratory epithelial cells

oral mucosa

squamous epithelial cells

parathyroid gland

glandular cells

placenta

decidual cells

placenta

trophoblastic cells

prostate

glandular cells

rectum

glandular cells

small intestine

glandular cells

stomach

glandular cells

thyroid gland

glandular cells

tonsil

squamous epithelial cells

urinary bladder

urothelial cells

vagina

squamous epithelial cells

No databases found.

Pubmed ID Author Year Title

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

Gene Symbol Entrez ID Uniprot ID Score

PAK2

5062

Q13177

0.49

TTC1

7265

Q99614

0.49

UTRN

7402

P46939

0.49

VIM

7431

P08670

0.49

ZKSCAN5

23660

Q9Y2L8

0.49

ZC3H15

55854

Q8WU90

0.49

ZCRB1

85437

Q8TBF4

0.49

NUDCD2

134492

Q8WVJ2

0.49

THOC6

79228

Q86W42

0.59

THOC7

80145

Q6I9Y2

0.83

ADRBK1

156

P25098

0.63

BRCA1

672

P38398

0.63

HDGF

3068

P51858

0.63

SUMO2

6613

P61956

0.63

TK1

7083

P04183

0.63

KIAA0101

9768

Q15004

0.63

MLKL

197259

Q8NB16

0.63

BCLAF1

9774

Q9NYF8

0.72

NCBP1

4686

Q09161

0.73

YOD1

55432

Q5VVQ6

0.76

DDX39B

7919

Q13838

0.79

ALYREF

10189

Q86V81

0.79

THOC5

8563

Q13769

0.83

THOC1

9984

Q96FV9

0.83

THOC2

57187

Q8NI27

0.83