| Gene Symbol | SCAF4 |
| Entrez ID | 57466 |
| Uniprot ID | O95104 |
| Description | SR-related CTD-associated factor 4 |
| Chromosomal Location | chr21: 31,671,033-31,732,075 |
| Ontology | GO ID | GO Term | Definition | Evidence |
|---|---|---|---|---|
|
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
IDA |
|
MF |
GO:0000166 |
nucleotide binding |
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
IEA |
|
MF |
GO:0044822 |
poly(A) RNA binding |
Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases. |
IDA |
| Domain ID | Description |
|---|---|
|
IPR000504 |
RNA recognition motif domain |
|
IPR006569 |
CID domain |
|
IPR006903 |
RNA polymerase II-binding domain |
|
IPR008942 |
ENTH/VHS |
|
IPR034369 |
SCAF4, RNA recognition motif |
| UMLS CUI | UMLS Term |
|---|---|
|
C0013080 |
Down Syndrome |
|
C0151786 |
Muscle Weakness |
| Tissue | Cell Type |
|---|---|
|
appendix |
glandular cells |
|
bronchus |
respiratory epithelial cells |
|
cerebellum |
Purkinje cells |
|
cervix, uterine |
glandular cells |
|
cervix, uterine |
squamous epithelial cells |
|
colon |
glandular cells |
|
duodenum |
glandular cells |
|
epididymis |
glandular cells |
|
esophagus |
squamous epithelial cells |
|
gallbladder |
glandular cells |
|
lymph node |
germinal center cells |
|
nasopharynx |
respiratory epithelial cells |
|
pancreas |
exocrine glandular cells |
|
placenta |
decidual cells |
|
placenta |
trophoblastic cells |
|
rectum |
glandular cells |
|
skin |
keratinocytes |
|
skin |
Langerhans |
|
small intestine |
glandular cells |
|
stomach |
glandular cells |
|
testis |
cells in seminiferous ducts |
|
tonsil |
germinal center cells |
|
tonsil |
non-germinal center cells |
|
tonsil |
squamous epithelial cells |
|
urinary bladder |
urothelial cells |
|
vagina |
squamous epithelial cells |
| Pubmed ID | Author | Year | Title |
|---|---|---|---|
|
19141487 |
Kenigsberg et al. |
2009 |
Gene expression microarray profiles of cumulus cells in lean and overweightobese polycystic ovary syndrome patients |
|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
| Gene Symbol | Entrez ID | Uniprot ID | Score |
|---|---|---|---|
|
PLAUR |
5329 |
Q03405 |
0.49 |
|
SH3BGRL |
6451 |
O75368 |
0.49 |
|
SVIL |
6840 |
O95425 |
0.49 |
|
UQCRFS1 |
7386 |
P47985 |
0.49 |
|
VCL |
7414 |
P18206 |
0.49 |
|
SUCLG2 |
8801 |
Q96I99 |
0.49 |
|
VAPB |
9217 |
O95292 |
0.49 |
|
CDK12 |
51755 |
Q9NYV4 |
0.49 |
|
TXNDC17 |
84817 |
Q9BRA2 |
0.49 |
|
SPTY2D1 |
144108 |
Q68D10 |
0.49 |
|
VMA21 |
203547 |
Q3ZAQ7 |
0.49 |
|
UQCRFS1P1 |
100128525 |
P0C7P4 |
0.49 |
|
OXCT1 |
5019 |
P55809 |
0.49 |
|
SELENBP1 |
8991 |
Q13228 |
0.49 |
|
COA7 |
65260 |
Q96BR5 |
0.49 |
|
BARD1 |
580 |
Q99728 |
0.63 |
|
ELAVL1 |
1994 |
Q15717 |
0.63 |
|
RPA1 |
6117 |
P27694 |
0.63 |
|
RPA2 |
6118 |
P15927 |
0.63 |
|
RPA3 |
6119 |
P35244 |
0.63 |
|
TP63 |
8626 |
Q9H3D4 |
0.63 |
|
EED |
8726 |
O75530 |
0.63 |
|
OBSL1 |
23363 |
O75147 |
0.63 |
|
QPRT |
23475 |
Q15274 |
0.63 |
|
WWOX |
51741 |
Q9NZC7 |
0.63 |
|
LUC7L |
55692 |
Q9NQ29 |
0.63 |
|
MMS19 |
64210 |
Q96T76 |
0.63 |
|
WBP4 |
11193 |
O75554 |
0.68 |
|
CCNB2 |
9133 |
O95067 |
0.72 |
|
PPP4R3A |
55671 |
Q6IN85 |
0.72 |