Gene Symbol | POLR3B |
Entrez ID | 55703 |
Uniprot ID | Q9NW08 |
Description | polymerase (RNA) III (DNA directed) polypeptide B |
Chromosomal Location | chr12: 106,357,658-106,510,198 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006383 |
transcription from RNA polymerase III promoter |
The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter. |
IEA |
BP |
GO:0032481 |
positive regulation of type I interferon production |
Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families. |
TAS |
BP |
GO:0032728 |
positive regulation of interferon-beta production |
Any process that activates or increases the frequency, rate, or extent of interferon-beta production. |
IMP |
BP |
GO:0045087 |
innate immune response |
Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. |
IEA |
BP |
GO:0045089 |
positive regulation of innate immune response |
Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection. |
IMP |
BP |
GO:0051607 |
defense response to virus |
Reactions triggered in response to the presence of a virus that act to protect the cell or organism. |
IEA |
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
TAS |
CC |
GO:0005666 |
DNA-directed RNA polymerase III complex |
RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template. |
IDA |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
TAS |
MF |
GO:0001056 |
RNA polymerase III activity |
Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase III specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'. |
IBA |
MF |
GO:0003677 |
DNA binding |
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
IEA |
MF |
GO:0032549 |
ribonucleoside binding |
Interacting selectively and non-covalently with a ribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to ribose. |
IEA |
MF |
GO:0046872 |
metal ion binding |
Interacting selectively and non-covalently with any metal ion. |
IEA |
Domain ID | Description |
---|---|
IPR007120 |
DNA-directed RNA polymerase, subunit 2, domain 6 |
IPR007121 |
RNA polymerase, beta subunit, conserved site |
IPR007641 |
RNA polymerase Rpb2, domain 7 |
IPR007642 |
RNA polymerase Rpb2, domain 2 |
IPR007644 |
RNA polymerase, beta subunit, protrusion |
IPR007645 |
RNA polymerase Rpb2, domain 3 |
IPR007646 |
RNA polymerase Rpb2, domain 4 |
IPR007647 |
RNA polymerase Rpb2, domain 5 |
IPR015712 |
DNA-directed RNA polymerase, subunit 2 |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa00230 |
Purine metabolism |
KEGG |
hsa00240 |
Pyrimidine metabolism |
KEGG |
hsa01100 |
Metabolic pathways |
KEGG |
hsa03020 |
RNA polymerase |
KEGG |
hsa04623 |
Cytosolic DNA-sensing pathway |
KEGG |
hsa05169 |
Epstein-Barr virus infection |
KEGG |
WP405 |
Eukaryotic Transcription Initiation |
WikiPathways |
UMLS CUI | UMLS Term |
---|---|
C3714756 |
Intellectual Disability |
Tissue | Cell Type |
---|---|
adrenal gland |
glandular cells |
appendix |
glandular cells |
bone marrow |
hematopoietic cells |
breast |
glandular cells |
bronchus |
respiratory epithelial cells |
caudate |
neuronal cells |
cerebellum |
cells in molecular layer |
cerebellum |
Purkinje cells |
cerebral cortex |
neuronal cells |
cervix, uterine |
glandular cells |
cervix, uterine |
squamous epithelial cells |
colon |
glandular cells |
duodenum |
glandular cells |
endometrium |
glandular cells |
endometrium |
cells in endometrial stroma |
fallopian tube |
glandular cells |
gallbladder |
glandular cells |
heart muscle |
myocytes |
kidney |
cells in glomeruli |
kidney |
cells in tubules |
lung |
macrophages |
nasopharynx |
respiratory epithelial cells |
oral mucosa |
squamous epithelial cells |
ovary |
follicle cells |
pancreas |
exocrine glandular cells |
parathyroid gland |
glandular cells |
placenta |
decidual cells |
placenta |
trophoblastic cells |
rectum |
glandular cells |
salivary gland |
glandular cells |
seminal vesicle |
glandular cells |
skeletal muscle |
myocytes |
skin |
keratinocytes |
skin |
epidermal cells |
small intestine |
glandular cells |
smooth muscle |
smooth muscle cells |
testis |
Leydig cells |
thyroid gland |
glandular cells |
tonsil |
squamous epithelial cells |
vagina |
squamous epithelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
POLR2A |
5430 |
P24928 |
0.49 |
POLR3G |
10622 |
O15318 |
0.49 |
RRS1 |
23212 |
Q15050 |
0.49 |
NOB1 |
28987 |
Q9ULX3 |
0.49 |
POLR3K |
51728 |
Q9Y2Y1 |
0.49 |
EEF1A1 |
1915 |
P68104 |
0.56 |
RPL30 |
6156 |
P62888 |
0.56 |
SMARCA5 |
8467 |
O60264 |
0.56 |
POLR3F |
10621 |
Q9H1D9 |
0.56 |
POLR1A |
25885 |
O95602 |
0.56 |
IPO9 |
55705 |
Q96P70 |
0.56 |
MRPL17 |
63875 |
Q9NRX2 |
0.56 |
POLR1B |
84172 |
Q9H9Y6 |
0.56 |
TSR1 |
55720 |
Q2NL82 |
0.59 |
CRCP |
27297 |
O75575 |
0.65 |
POLR3E |
55718 |
Q9NVU0 |
0.82 |
POLR2E |
5434 |
P19388 |
0.49 |
POLR3C |
10623 |
Q9BUI4 |
0.49 |
CHM |
1121 |
P24386 |
0.63 |
MOV10 |
4343 |
Q9HCE1 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
PPP1CA |
5499 |
P62136 |
0.63 |
PPP1CC |
5501 |
P36873 |
0.63 |
SUMO2 |
6613 |
P61956 |
0.63 |
SKAP1 |
8631 |
Q86WV1 |
0.63 |
NXF1 |
10482 |
Q9UBU9 |
0.63 |
GPN3 |
51184 |
Q9UHW5 |
0.63 |
PIH1D1 |
55011 |
Q9NWS0 |
0.63 |
MAF1 |
84232 |
Q9H063 |
0.63 |
POLR2H |
5437 |
P52434 |
0.65 |
POLR1C |
9533 |
O15160 |
0.65 |
POLR3A |
11128 |
O14802 |
0.65 |
POLR1D |
51082 |
Q9Y2S0 |
0.65 |
GSK3A |
2931 |
P49840 |
0.72 |
RAE1 |
8480 |
P78406 |
0.72 |
MATR3 |
9782 |
P43243 |
0.72 |
RPAP1 |
26015 |
Q9BWH6 |
0.72 |
RPAP2 |
79871 |
Q8IXW5 |
0.72 |
DSN1 |
79980 |
Q9H410 |
0.72 |
POLR2F |
5435 |
P61218 |
0.79 |
GPN1 |
11321 |
Q9HCN4 |
0.79 |
POLR3D |
661 |
P05423 |
0.83 |
POLR3H |
171568 |
Q9Y535 |
0.89 |