Protein Description

Gene Symbol LGR4
Entrez ID 55366
Uniprot ID Q9BXB1
Description leucine-rich repeat containing G protein-coupled receptor 4
Chromosomal Location chr11: 27,365,961-27,472,775
Ontology GO ID GO Term Definition Evidence

BP

GO:0001649

osteoblast differentiation

The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, a mesodermal or neural crest cell that gives rise to bone.

ISS

BP

GO:0001942

hair follicle development

The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open.

IEA

BP

GO:0007186

G-protein coupled receptor signaling pathway

A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576).

IEA

BP

GO:0007283

spermatogenesis

The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis.

ISS

BP

GO:0030282

bone mineralization

The deposition of hydroxyapatite, a form of calcium phosphate with the formula Ca10(PO4)6(OH)2, in bone tissue.

ISS

BP

GO:0030539

male genitalia development

The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure.

IEA

BP

GO:0032922

circadian regulation of gene expression

Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours.

ISS

BP

GO:0034122

negative regulation of toll-like receptor signaling pathway

Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor signaling pathway.

ISS

BP

GO:0036335

intestinal stem cell homeostasis

Any biological process involved in the maintenance of the steady-state number of intestinal stem cells within a population of cells.

IEA

BP

GO:0045087

innate immune response

Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.

IEA

BP

GO:0045892

negative regulation of transcription, DNA-templated

Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.

IEA

BP

GO:0045893

positive regulation of transcription, DNA-templated

Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.

IEA

BP

GO:0046849

bone remodeling

The continuous turnover of bone matrix and mineral that involves first, an increase in resorption (osteoclastic activity) and later, reactive bone formation (osteoblastic activity). The process of bone remodeling takes place in the adult skeleton at discrete foci. The process ensures the mechanical integrity of the skeleton throughout life and plays an important role in calcium homeostasis. An imbalance in the regulation of bone resorption and bone formation results in many of the metabolic bone diseases, such as osteoporosis.

ISS

BP

GO:0048565

digestive tract development

The process whose specific outcome is the progression of the digestive tract over time, from its formation to the mature structure. The digestive tract is the anatomical structure through which food passes and is processed.

IEA

BP

GO:0050710

negative regulation of cytokine secretion

Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of cytokines from a cell.

ISS

BP

GO:0061290

canonical Wnt signaling pathway involved in metanephric kidney development

The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contribute to the progression of the metanephric kidney over time. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.

IEA

BP

GO:0072202

cell differentiation involved in metanephros development

The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the metanephros as it progresses from its formation to the mature state.

IEA

BP

GO:0072224

metanephric glomerulus development

The progression of the metanephric glomerulus over time from its initial formation until its mature state. The metanephric glomerulus is a capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the mature vertebrate kidney, or metanephros.

IEA

BP

GO:0072282

metanephric nephron tubule morphogenesis

The process in which the anatomical structures of a metanephric nephron tubule are generated and organized. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.

IEA

BP

GO:0090190

positive regulation of branching involved in ureteric bud morphogenesis

Any process that increases the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.

IEA

BP

GO:0090263

positive regulation of canonical Wnt signaling pathway

Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.

IDA

BP

GO:2001013

epithelial cell proliferation involved in renal tubule morphogenesis

Any epithelial cell proliferation that is involved in renal tubule morphogenesis.

IEA

CC

GO:0005886

plasma membrane

The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

TAS

CC

GO:0005887

integral component of plasma membrane

The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

IDA

MF

GO:0004888

transmembrane signaling receptor activity

Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction.

IDA

MF

GO:0005515

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

IPI

Domain ID Description

IPR000276

G protein-coupled receptor, rhodopsin-like

IPR000372

Leucine-rich repeat N-terminal domain

IPR001611

Leucine-rich repeat

IPR002131

Glycoprotein hormone receptor family

IPR003591

Leucine-rich repeat, typical subtype

IPR017452

GPCR, rhodopsin-like, 7TM

IPR032675

Leucine-rich repeat domain, L domain-like

Pathway ID Pathway Term Pathway Source

WP3594

Circadian rythm related genes

WikiPathways

UMLS CUI UMLS Term

C0036341

Schizophrenia

Tissue Cell Type

adrenal gland

glandular cells

breast

glandular cells

cerebellum

Purkinje cells

endometrium

glandular cells

lung

macrophages

placenta

decidual cells

placenta

trophoblastic cells

salivary gland

glandular cells

thyroid gland

glandular cells

Database Name

PhenomicDB

Pubmed ID Author Year Title

22951915

Haozi et al.

2012

Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome

Gene Symbol Entrez ID Uniprot ID Score

ABAT

18

P80404

0.63

ACTB

60

P60709

0.63

ACTG1

71

P63261

0.63

AGL

178

P35573

0.63

SLC25A5

292

P05141

0.63

ATP1A1

476

P05023

0.63

ATP1A2

477

P50993

0.63

ATP1A3

478

P13637

0.63

ATP2A1

487

O14983

0.63

ATP2A2

488

P16615

0.63

ATP2B1

490

P20020

0.63

ATP2B2

491

Q01814

0.63

ATP2B3

492

Q16720

0.63

ATP4A

495

P20648

0.63

CAD

790

P27708

0.63

CALR

811

P27797

0.63

CANX

821

P27824

0.63

CDX1

1044

P47902

0.63

CHD3

1107

Q12873

0.63

CHD4

1108

Q14839

0.63

CLTC

1213

Q00610

0.63

CPD

1362

O75976

0.63

CPT1A

1374

P50416

0.63

DCTN1

1639

Q14203

0.63

DDX3X

1654

O00571

0.63

DHX9

1660

Q08211

0.63

DMPK

1760

Q09013

0.63

DSCAM

1826

O60469

0.63

EEF1A1

1915

P68104

0.63

EEF1A2

1917

Q05639

0.63

EEF2

1938

P13639

0.63

EIF4G1

1981

Q04637

0.63

EPRS

2058

P07814

0.63

FASN

2194

P49327

0.63

GAK

2580

O14976

0.63

GOLGA3

2802

Q08378

0.63

HDLBP

3069

Q00341

0.63

HLA-DPB1

3115

P04440

0.63

HNRNPK

3190

P61978

0.63

HNRNPU

3192

Q00839

0.63

HSPA2

3306

P54652

0.63

HSPD1

3329

P10809

0.63

IARS

3376

P41252

0.63

ILF3

3609

Q12906

0.63

KRT1

3848

P04264

0.63

KRT2

3849

P35908

0.63

KRT5

3852

P13647

0.63

KRT6A

3853

P02538

0.63

KRT9

3857

P35527

0.63

LAMC1

3915

P11047

0.63

LRP6

4040

O75581

0.63

MAP4

4134

P27816

0.63

KMT2A

4297

Q03164

0.63

MLLT4

4301

P55196

0.63

MYH9

4627

P35579

0.63

MYH10

4628

P35580

0.63

MYH11

4629

P35749

0.63

NDUFA10

4705

O95299

0.63

NOP2

4839

P46087

0.63

NPC1

4864

O15118

0.63

NPM1

4869

P06748

0.63

NUMA1

4926

Q14980

0.63

SLC25A3

5250

Q00325

0.63

PIK3C2A

5286

O00443

0.63

PKHD1

5314

P08F94

0.63

POLH

5429

Q9Y253

0.63

POLR2A

5430

P24928

0.63

PRKDC

5591

P78527

0.63

PRSS1

5644

P07477

0.63

PTBP1

5725

P26599

0.63

RANBP2

5903

P49792

0.63

RPL5

6125

P46777

0.63

RPL7

6129

P18124

0.63

RPN1

6184

P04843

0.63

RRBP1

6238

Q9P2E9

0.63

SAFB

6294

Q15424

0.63

SKIV2L

6499

Q15477

0.63

SLC1A5

6510

Q15758

0.63

SLC3A2

6520

P08195

0.63

SLC16A1

6566

P53985

0.63

SURF4

6836

O15260

0.63

TCOF1

6949

Q13428

0.63

TFRC

7037

P02786

0.63

TPR

7175

P12270

0.63

TPTE

7179

P56180

0.63

PRRC2A

7916

P48634

0.63

PDHX

8050

O00330

0.63

SLC7A5

8140

Q01650

0.63

CLTCL1

8218

P53675

0.63

IRS4

8471

O14654

0.63

CDC42BPA

8476

Q5VT25

0.63

KHSRP

8570

Q92945

0.63

EIF3A

8661

Q14152

0.63

EIF4G3

8672

O43432

0.63

PEA15

8682

Q15121

0.63

IQGAP1

8826

P46940

0.63

KRT75

9119

O95678

0.63

SCAF11

9169

Q99590

0.63

DDX21

9188

Q9NR30

0.63

LRRFIP1

9208

Q32MZ4

0.63

CDC42BPB

9578

Q9Y5S2

0.63

CREB5

9586

Q02930

0.63

EIF5B

9669

O60841

0.63

AQR

9716

O60306

0.63

MATR3

9782

P43243

0.63

URB1

9875

O60287

0.63

HS3ST1

9957

O14792

0.63

THRAP3

9967

Q9Y2W1

0.63

SMC4

10051

Q9NTJ3

0.63

LRPPRC

10128

P42704

0.63

TUBA1B

10376

P68363

0.63

N4BP2L2

10443

Q92802

0.63

MYBBP1A

10514

Q9BQG0

0.63

DDX17

10521

Q92841

0.63

PRPF8

10594

Q6P2Q9

0.63

TBL3

10607

Q12788

0.63

KHDRBS1

10657

Q07666

0.63

WDR4

10785

P57081

0.63

ASCC3

10973

Q8N3C0

0.63

GCN1

10985

Q92616

0.63

IMMT

10989

Q16891

0.63

NISCH

11188

Q9Y2I1

0.63

PDCD11

22984

Q14690

0.63

ACIN1

22985

Q9UKV3

0.63

CNOT1

23019

A5YKK6

0.63

SNRNP200

23020

O75643

0.63

MYCBP2

23077

O75592

0.63

VWA8

23078

A3KMH1

0.63

NUP205

23165

Q92621

0.63

PRRC2C

23215

Q9Y520

0.63

RRP12

23223

Q5JTH9

0.63

NUP210

23225

Q8TEM1

0.63

FKBP15

23307

Q5T1M5

0.63

NCAPD3

23310

P42695

0.63

DNAJC13

23317

O75165

0.63

SMCHD1

23347

A6NHR9

0.63

FNBP4

23360

Q8N3X1

0.63

SF3B3

23450

Q15393

0.63

SF3B1

23451

O75533

0.63

SCRIB

23513

Q14160

0.63

EDC4

23644

Q6P2E9

0.63

POLR1A

25885

O95602

0.63

GEMIN5

25929

Q8TEQ6

0.63

PTPN23

25930

Q9H3S7

0.63

KIAA1429

25962

Q69YN4

0.63

UPF2

26019

Q9HAU5

0.63

GIGYF2

26058

Q6Y7W6

0.63

PELP1

27043

Q8IZL8

0.63

ZNF638

27332

Q14966

0.63

NPC1L1

29881

Q9UHC9

0.63

CPSF1

29894

Q10570

0.63

HACD3

51495

Q9P035

0.63

SRRT

51593

Q9BXP5

0.63

TUBA8

51807

Q9NY65

0.63

PIGG

54872

Q5H8A4

0.63

GPATCH1

55094

Q9BRR8

0.63

HEATR1

55127

Q9H583

0.63

RFWD3

55159

Q6PCD5

0.63

ATAD3A

55210

Q9NVI7

0.63

LGR4

55366

Q9BXB1

0.63

ARHGEF40

55701

Q8TER5

0.63

YLPM1

56252

P49750

0.63

UGGT1

56886

Q9NYU2

0.63

OTUD7B

56957

Q6GQQ9

0.63

THOC2

57187

Q8NI27

0.63

KIDINS220

57498

Q9ULH0

0.63

RBM25

58517

P49756

0.63

TBC1D17

79735

Q9HA65

0.63

MYH14

79784

Q7Z406

0.63

ATAD3B

83858

Q5T9A4

0.63

RPF2

84154

Q9H7B2

0.63

DOCK7

85440

Q96N67

0.63

NEXN

91624

Q0ZGT2

0.63

TPTE2

93492

Q6XPS3

0.63

TUBA3E

112714

Q6PEY2

0.63

FTSJ3

117246

Q8IY81

0.63

ANTXR2

118429

P58335

0.63

ZC3H18

124245

Q86VM9

0.63

IQGAP3

128239

Q86VI3

0.63

TRIM40

135644

Q6P9F5

0.63

LSM14B

149986

Q9BX40

0.63

USP54

159195

Q70EL1

0.63

ZFC3H1

196441

O60293

0.63

TUBB

203068

P07437

0.63

RGPD4

285190

Q7Z3J3

0.63

KRT79

338785

Q5XKE5

0.63

FBLL1

345630

A6NHQ2

0.63

KRT77

374454

Q7Z794

0.63

POTEKP

440915

Q9BYX7

0.63

CCDC157

550631

Q569K6

0.63

POTEJ

653781

P0CG39

0.63

POTEF

728378

A5A3E0

0.63

FAM189A2

9413

Q15884

0.63

ZNRF3

84133

Q9ULT6

0.74

RSPO3

84870

Q9BXY4

0.80

RSPO2

340419

Q6UXX9

0.80

RSPO4

343637

Q2I0M5

0.80

RSPO1

284654

Q2MKA7

0.86