Protein Description

Gene Symbol NSUN2
Entrez ID 54888
Uniprot ID Q08J23
Description NOP2/Sun RNA methyltransferase family member 2
Chromosomal Location chr5: 6,599,239-6,633,291
Ontology GO ID GO Term Definition Evidence

BP

GO:0006400

tRNA modification

The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically.

TAS

BP

GO:0007067

mitotic nuclear division

A cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell.

IEA

BP

GO:0007286

spermatid development

The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.

IEA

BP

GO:0030488

tRNA methylation

The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule.

IDA

BP

GO:0033313

meiotic cell cycle checkpoint

A cell cycle checkpoint that ensures accurate chromosome replication and segregation by preventing progression through a meiotic cell cycle until conditions are suitable for the cell to proceed to the next stage.

IEA

BP

GO:0051301

cell division

The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.

IEA

CC

GO:0005634

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

IDA

CC

GO:0005654

nucleoplasm

That part of the nuclear content other than the chromosomes or the nucleolus.

TAS

CC

GO:0005730

nucleolus

A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.

IDA

CC

GO:0005737

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

IDA

CC

GO:0005819

spindle

The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.

IEA

CC

GO:0033391

chromatoid body

A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182).

IEA

MF

GO:0000049

tRNA binding

Interacting selectively and non-covalently with transfer RNA.

IBA

MF

GO:0016428

tRNA (cytosine-5-)-methyltransferase activity

Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine.

EXP|IDA

MF

GO:0044822

poly(A) RNA binding

Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases.

IDA

Domain ID Description

IPR001678

SAM-dependent methyltransferase RsmB/NOP2-type

IPR023267

RNA (C5-cytosine) methyltransferase

IPR023270

tRNA (C5-cytosine) methyltransferase, NCL1

IPR029063

S-adenosyl-L-methionine-dependent methyltransferase

No pathways found.

No diseases found.

Tissue Cell Type

appendix

glandular cells

colon

glandular cells

duodenum

glandular cells

epididymis

glandular cells

esophagus

squamous epithelial cells

gallbladder

glandular cells

kidney

cells in tubules

liver

hepatocytes

oral mucosa

squamous epithelial cells

pancreas

exocrine glandular cells

placenta

trophoblastic cells

rectum

glandular cells

skin

epidermal cells

small intestine

glandular cells

stomach

glandular cells

testis

cells in seminiferous ducts

testis

Leydig cells

tonsil

squamous epithelial cells

urinary bladder

urothelial cells

No databases found.

Pubmed ID Author Year Title

22951915

Haozi et al.

2012

Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome

Gene Symbol Entrez ID Uniprot ID Score

AARS

16

P49588

0.49

CSNK1E

1454

P49674

0.49

RPS27A

6233

P62979

0.49

UBA1

7317

P22314

0.49

YES1

7525

P07947

0.49

DDX49

54555

Q9Y6V7

0.49

WDR74

54663

Q6RFH5

0.49

PNO1

56902

Q9NRX1

0.49

HARS

3035

P12081

0.63

NCL

4691

P19338

0.63

NRDC

4898

O43847

0.63

PFDN1

5201

O60925

0.63

RANGAP1

5905

P46060

0.63

RDX

5962

P35241

0.63

RPA1

6117

P27694

0.63

SH3GL1

6455

Q99961

0.63

FUBP1

8880

Q96AE4

0.63

UBXN7

26043

O94888

0.63

KIF1BP

26128

Q96EK5

0.63

THG1L

54974

Q9NWX6

0.63

UGGT1

56886

Q9NYU2

0.63

PFDN5

5204

Q99471

0.73

NPM1

4869

P06748

0.82

GTF2B

2959

Q00403

0.49

USP39

10713

Q53GS9

0.49

CEP164

22897

Q9UPV0

0.49

AURKB

9212

Q96GD4

0.55

PUS7

54517

Q96PZ0

0.56

CALR

811

P27797

0.63

CALU

813

O43852

0.63

EGFR

1956

P00533

0.63

FGL1

2267

Q08830

0.63

GTF2E1

2960

P29083

0.63

IFI16

3428

Q16666

0.63

ITGA4

3676

P13612

0.63

JUN

3725

P05412

0.63

PPP1R12A

4659

O14974

0.63

NEDD8

4738

Q15843

0.63

NFKB1

4790

P19838

0.63

YBX1

4904

P67809

0.63

NTRK1

4914

P04629

0.63

PPP2CB

5516

P62714

0.63

SUMO3

6612

P55854

0.63

THBS3

7059

P49746

0.63

TSN

7247

Q15631

0.63

CUL5

8065

Q93034

0.63

CUL3

8452

Q13618

0.63

CUL1

8454

Q13616

0.63

ACTR3

10096

P61158

0.63

ACTR2

10097

P61160

0.63

ARPC2

10109

O15144

0.63

UBD

10537

O15205

0.63

COPS5

10987

Q92905

0.63

TTLL12

23170

Q14166

0.63

SH3GLB1

51100

Q9Y371

0.63

SIRT7

51547

Q9NRC8

0.63

PANK4

55229

Q9NVE7

0.63

OTUB1

55611

Q96FW1

0.63

OSGEP

55644

Q9NPF4

0.63

CAND1

55832

Q86VP6

0.63

XPO5

57510

Q9HAV4

0.63

EFL1

79631

Q7Z2Z2

0.63

PUS1

80324

Q9Y606

0.63

CCDC8

83987

Q9H0W5

0.63

TP53RK

112858

Q96S44

0.63

PYHIN1

149628

Q6K0P9

0.63

FBL

2091

P22087

0.65

ARRB2

409

P32121

0.72

PMS2

5395

P54278

0.72

RPL10

6134

P27635

0.72

LCA5

167691

Q86VQ0

0.72

SUMO2

6613

P61956

0.74

SUMO1

7341

P63165

0.78

VCAM1

7412

P19320

0.82