Gene Symbol | NSUN2 |
Entrez ID | 54888 |
Uniprot ID | Q08J23 |
Description | NOP2/Sun RNA methyltransferase family member 2 |
Chromosomal Location | chr5: 6,599,239-6,633,291 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006400 |
tRNA modification |
The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically. |
TAS |
BP |
GO:0007067 |
mitotic nuclear division |
A cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell. |
IEA |
BP |
GO:0007286 |
spermatid development |
The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure. |
IEA |
BP |
GO:0030488 |
tRNA methylation |
The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule. |
IDA |
BP |
GO:0033313 |
meiotic cell cycle checkpoint |
A cell cycle checkpoint that ensures accurate chromosome replication and segregation by preventing progression through a meiotic cell cycle until conditions are suitable for the cell to proceed to the next stage. |
IEA |
BP |
GO:0051301 |
cell division |
The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. |
IEA |
CC |
GO:0005634 |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
IDA |
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
TAS |
CC |
GO:0005730 |
nucleolus |
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
IDA |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
CC |
GO:0005819 |
spindle |
The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart. |
IEA |
CC |
GO:0033391 |
chromatoid body |
A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182). |
IEA |
MF |
GO:0000049 |
tRNA binding |
Interacting selectively and non-covalently with transfer RNA. |
IBA |
MF |
GO:0016428 |
tRNA (cytosine-5-)-methyltransferase activity |
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine. |
EXP|IDA |
MF |
GO:0044822 |
poly(A) RNA binding |
Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases. |
IDA |
Domain ID | Description |
---|---|
IPR001678 |
SAM-dependent methyltransferase RsmB/NOP2-type |
IPR023267 |
RNA (C5-cytosine) methyltransferase |
IPR023270 |
tRNA (C5-cytosine) methyltransferase, NCL1 |
IPR029063 |
S-adenosyl-L-methionine-dependent methyltransferase |
Tissue | Cell Type |
---|---|
appendix |
glandular cells |
colon |
glandular cells |
duodenum |
glandular cells |
epididymis |
glandular cells |
esophagus |
squamous epithelial cells |
gallbladder |
glandular cells |
kidney |
cells in tubules |
liver |
hepatocytes |
oral mucosa |
squamous epithelial cells |
pancreas |
exocrine glandular cells |
placenta |
trophoblastic cells |
rectum |
glandular cells |
skin |
epidermal cells |
small intestine |
glandular cells |
stomach |
glandular cells |
testis |
cells in seminiferous ducts |
testis |
Leydig cells |
tonsil |
squamous epithelial cells |
urinary bladder |
urothelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
AARS |
16 |
P49588 |
0.49 |
CSNK1E |
1454 |
P49674 |
0.49 |
RPS27A |
6233 |
P62979 |
0.49 |
UBA1 |
7317 |
P22314 |
0.49 |
YES1 |
7525 |
P07947 |
0.49 |
DDX49 |
54555 |
Q9Y6V7 |
0.49 |
WDR74 |
54663 |
Q6RFH5 |
0.49 |
PNO1 |
56902 |
Q9NRX1 |
0.49 |
HARS |
3035 |
P12081 |
0.63 |
NCL |
4691 |
P19338 |
0.63 |
NRDC |
4898 |
O43847 |
0.63 |
PFDN1 |
5201 |
O60925 |
0.63 |
RANGAP1 |
5905 |
P46060 |
0.63 |
RDX |
5962 |
P35241 |
0.63 |
RPA1 |
6117 |
P27694 |
0.63 |
SH3GL1 |
6455 |
Q99961 |
0.63 |
FUBP1 |
8880 |
Q96AE4 |
0.63 |
UBXN7 |
26043 |
O94888 |
0.63 |
KIF1BP |
26128 |
Q96EK5 |
0.63 |
THG1L |
54974 |
Q9NWX6 |
0.63 |
UGGT1 |
56886 |
Q9NYU2 |
0.63 |
PFDN5 |
5204 |
Q99471 |
0.73 |
NPM1 |
4869 |
P06748 |
0.82 |
GTF2B |
2959 |
Q00403 |
0.49 |
USP39 |
10713 |
Q53GS9 |
0.49 |
CEP164 |
22897 |
Q9UPV0 |
0.49 |
AURKB |
9212 |
Q96GD4 |
0.55 |
PUS7 |
54517 |
Q96PZ0 |
0.56 |
CALR |
811 |
P27797 |
0.63 |
CALU |
813 |
O43852 |
0.63 |
EGFR |
1956 |
P00533 |
0.63 |
FGL1 |
2267 |
Q08830 |
0.63 |
GTF2E1 |
2960 |
P29083 |
0.63 |
IFI16 |
3428 |
Q16666 |
0.63 |
ITGA4 |
3676 |
P13612 |
0.63 |
JUN |
3725 |
P05412 |
0.63 |
PPP1R12A |
4659 |
O14974 |
0.63 |
NEDD8 |
4738 |
Q15843 |
0.63 |
NFKB1 |
4790 |
P19838 |
0.63 |
YBX1 |
4904 |
P67809 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
PPP2CB |
5516 |
P62714 |
0.63 |
SUMO3 |
6612 |
P55854 |
0.63 |
THBS3 |
7059 |
P49746 |
0.63 |
TSN |
7247 |
Q15631 |
0.63 |
CUL5 |
8065 |
Q93034 |
0.63 |
CUL3 |
8452 |
Q13618 |
0.63 |
CUL1 |
8454 |
Q13616 |
0.63 |
ACTR3 |
10096 |
P61158 |
0.63 |
ACTR2 |
10097 |
P61160 |
0.63 |
ARPC2 |
10109 |
O15144 |
0.63 |
UBD |
10537 |
O15205 |
0.63 |
COPS5 |
10987 |
Q92905 |
0.63 |
TTLL12 |
23170 |
Q14166 |
0.63 |
SH3GLB1 |
51100 |
Q9Y371 |
0.63 |
SIRT7 |
51547 |
Q9NRC8 |
0.63 |
PANK4 |
55229 |
Q9NVE7 |
0.63 |
OTUB1 |
55611 |
Q96FW1 |
0.63 |
OSGEP |
55644 |
Q9NPF4 |
0.63 |
CAND1 |
55832 |
Q86VP6 |
0.63 |
XPO5 |
57510 |
Q9HAV4 |
0.63 |
EFL1 |
79631 |
Q7Z2Z2 |
0.63 |
PUS1 |
80324 |
Q9Y606 |
0.63 |
CCDC8 |
83987 |
Q9H0W5 |
0.63 |
TP53RK |
112858 |
Q96S44 |
0.63 |
PYHIN1 |
149628 |
Q6K0P9 |
0.63 |
FBL |
2091 |
P22087 |
0.65 |
ARRB2 |
409 |
P32121 |
0.72 |
PMS2 |
5395 |
P54278 |
0.72 |
RPL10 |
6134 |
P27635 |
0.72 |
LCA5 |
167691 |
Q86VQ0 |
0.72 |
SUMO2 |
6613 |
P61956 |
0.74 |
SUMO1 |
7341 |
P63165 |
0.78 |
VCAM1 |
7412 |
P19320 |
0.82 |