Gene Symbol | POLR3K |
Entrez ID | 51728 |
Uniprot ID | Q9Y2Y1 |
Description | polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa |
Chromosomal Location | chr16: 46,407-53,628 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006383 |
transcription from RNA polymerase III promoter |
The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter. |
TAS |
BP |
GO:0006386 |
termination of RNA polymerase III transcription |
The process in which transcription by RNA polymerase III is terminated; Pol III has an intrinsic ability to terminate transcription upon incorporation of 4 to 6 contiguous U residues. |
IBA |
BP |
GO:0032481 |
positive regulation of type I interferon production |
Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families. |
TAS |
BP |
GO:0045087 |
innate immune response |
Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. |
IEA |
BP |
GO:0051607 |
defense response to virus |
Reactions triggered in response to the presence of a virus that act to protect the cell or organism. |
IEA |
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
TAS |
CC |
GO:0005666 |
DNA-directed RNA polymerase III complex |
RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template. |
TAS |
CC |
GO:0005730 |
nucleolus |
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
IEA |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
TAS |
MF |
GO:0001056 |
RNA polymerase III activity |
Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase III specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'. |
IBA |
MF |
GO:0003676 |
nucleic acid binding |
Interacting selectively and non-covalently with any nucleic acid. |
IEA |
MF |
GO:0003899 |
DNA-directed RNA polymerase activity |
Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'. |
TAS |
MF |
GO:0008270 |
zinc ion binding |
Interacting selectively and non-covalently with zinc (Zn) ions. |
IEA |
Domain ID | Description |
---|---|
IPR001222 |
Zinc finger, TFIIS-type |
IPR001529 |
DNA-directed RNA polymerase, M/15kDa subunit |
IPR012164 |
DNA-directed RNA polymerase subunit/transcription factor S |
IPR019761 |
DNA-directed RNA polymerase M, 15kDa subunit, conserved site |
IPR034014 |
Pol III subunit C11, C-terminal zinc ribbon |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa00230 |
Purine metabolism |
KEGG |
hsa00240 |
Pyrimidine metabolism |
KEGG |
hsa01100 |
Metabolic pathways |
KEGG |
hsa03020 |
RNA polymerase |
KEGG |
hsa04623 |
Cytosolic DNA-sensing pathway |
KEGG |
hsa05169 |
Epstein-Barr virus infection |
KEGG |
WP405 |
Eukaryotic Transcription Initiation |
WikiPathways |
UMLS CUI | UMLS Term |
---|---|
C0038356 |
Stomach Neoplasms |
C0242656 |
Disease Progression |
Tissue | Cell Type |
---|---|
adrenal gland |
glandular cells |
bone marrow |
hematopoietic cells |
breast |
glandular cells |
cerebellum |
Purkinje cells |
cerebral cortex |
neuronal cells |
colon |
glandular cells |
duodenum |
glandular cells |
fallopian tube |
glandular cells |
lymph node |
non-germinal center cells |
nasopharynx |
respiratory epithelial cells |
pancreas |
exocrine glandular cells |
placenta |
trophoblastic cells |
rectum |
glandular cells |
small intestine |
glandular cells |
soft tissue |
adipocytes |
stomach |
glandular cells |
testis |
cells in seminiferous ducts |
thyroid gland |
glandular cells |
tonsil |
non-germinal center cells |
urinary bladder |
urothelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
POLR1C |
9533 |
O15160 |
0.56 |
POLR2H |
5437 |
P52434 |
0.00 |
POLR3H |
171568 |
Q9Y535 |
0.00 |
POLR2E |
5434 |
P19388 |
0.49 |
POLR3C |
10623 |
Q9BUI4 |
0.49 |
POLR3A |
11128 |
O14802 |
0.49 |
POLR3B |
55703 |
Q9NW08 |
0.49 |
POLR3F |
10621 |
Q9H1D9 |
0.56 |
CRCP |
27297 |
O75575 |
0.56 |
GPN3 |
51184 |
Q9UHW5 |
0.63 |
PIH1D1 |
55011 |
Q9NWS0 |
0.63 |
RFPL4B |
442247 |
Q6ZWI9 |
0.63 |
POLR3E |
55718 |
Q9NVU0 |
0.72 |
POLR3D |
661 |
P05423 |
0.83 |
POLR2F |
5435 |
P61218 |
0.88 |