Protein Description

Gene Symbol COPA
Entrez ID 1314
Uniprot ID P53621
Description coatomer protein complex subunit alpha
Chromosomal Location chr1: 160,289,273-160,343,400
Ontology GO ID GO Term Definition Evidence

BP

GO:0006886

intracellular protein transport

The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.

IBA

BP

GO:0006888

ER to Golgi vesicle-mediated transport

The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.

IBA|TAS

BP

GO:0006890

retrograde vesicle-mediated transport, Golgi to ER

The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.

IBA|TAS

BP

GO:0006891

intra-Golgi vesicle-mediated transport

The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).

IBA

BP

GO:0030157

pancreatic juice secretion

The regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine. Pancreatic juice is slightly alkaline and contains numerous enzymes and inactive enzyme precursors including alpha-amylase, chymotrypsinogen, lipase, procarboxypeptidase, proelastase, prophospholipase A2, ribonuclease, and trypsinogen. Its high concentration of bicarbonate ions helps to neutralize the acid from the stomach.

IDA

CC

GO:0000139

Golgi membrane

The lipid bilayer surrounding any of the compartments of the Golgi apparatus.

TAS

CC

GO:0005615

extracellular space

That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.

IDA

CC

GO:0005737

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

IDA

CC

GO:0005789

endoplasmic reticulum membrane

The lipid bilayer surrounding the endoplasmic reticulum.

TAS

CC

GO:0005829

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

TAS

CC

GO:0016020

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

IDA

CC

GO:0030126

COPI vesicle coat

One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state.

IDA|ISS

CC

GO:0030133

transport vesicle

Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell.

TAS

CC

GO:0070062

extracellular exosome

A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

IDA

MF

GO:0005179

hormone activity

The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects; all bind receptors and trigger some biological process.

IEA

MF

GO:0005198

structural molecule activity

The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell.

IEA

Domain ID Description

IPR001680

WD40 repeat

IPR006692

Coatomer, WD associated region

IPR010714

Coatomer, alpha subunit, C-terminal

IPR011048

Cytochrome cd1-nitrite reductase-like, haem d1 domain

IPR011990

Tetratricopeptide-like helical domain

IPR015943

WD40/YVTN repeat-like-containing domain

IPR016391

Coatomer alpha subunit

IPR017986

WD40-repeat-containing domain

IPR019775

WD40 repeat, conserved site

IPR020472

G-protein beta WD-40 repeat

IPR024977

Anaphase-promoting complex subunit 4, WD40 domain

Pathway ID Pathway Term Pathway Source

h_arapPathway

ADP-Ribosylation Factor

BioCarta

UMLS CUI UMLS Term

C0003864

Arthritis

C0004364

Autoimmune Diseases

C0206062

Lung Diseases, Interstitial

Tissue Cell Type

adrenal gland

glandular cells

appendix

glandular cells

bone marrow

hematopoietic cells

colon

glandular cells

duodenum

glandular cells

epididymis

glandular cells

fallopian tube

glandular cells

gallbladder

glandular cells

heart muscle

myocytes

lymph node

non-germinal center cells

pancreas

exocrine glandular cells

parathyroid gland

glandular cells

placenta

decidual cells

placenta

trophoblastic cells

rectum

glandular cells

seminal vesicle

glandular cells

small intestine

glandular cells

stomach

glandular cells

tonsil

non-germinal center cells

No databases found.

Pubmed ID Author Year Title

22951915

Haozi et al.

2012

Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome

Gene Symbol Entrez ID Uniprot ID Score

SEC24C

9632

P53992

0.49

SEC23A

10484

Q15436

0.49

SEPT9

10801

Q9UHD8

0.49

SF3B3

23450

Q15393

0.49

CCDC97

90324

Q96F63

0.49

SLC25A11

8402

Q02978

0.63

GEMIN2

8487

O14893

0.63

DDX20

11218

Q9UHI6

0.63

TCP1

6950

P17987

0.70

CCT3

7203

P49368

0.70

SMN1; SMN2

6606

Q16637

0.73

PDGFRB

5159

P09619

0.74

SACM1L

22908

Q9NTJ5

0.75

COPA

1314

P53621

0.78

COPZ1

22818

P61923

0.86

ARCN1

372

P48444

0.87

COPB1

1315

P53618

0.95

NPHP1

4867

O15259

0.49

SRSF3

6428

P84103

0.49

OFD1

8481

O75665

0.49

TRIP10

9322

Q15642

0.49

KHDRBS1

10657

Q07666

0.49

GCN1

10985

Q92616

0.49

SF3B1

23451

O75533

0.49

WBP1

23559

Q96G27

0.49

MKS1

54903

Q9NXB0

0.49

TMEM237

65062

Q96Q45

0.49

CEP128

145508

Q6ZU80

0.49

TMEM17

200728

Q86X19

0.49

STX8

9482

Q9UNK0

0.52

TMED2

10959

Q15363

0.52

CD8A

925

P01732

0.63

CDC5L

988

Q99459

0.63

CDK2

1017

P24941

0.63

CRY2

1408

Q49AN0

0.63

EGFR

1956

P00533

0.63

ESR1

2099

P03372

0.63

IFI16

3428

Q16666

0.63

ITGA4

3676

P13612

0.63

JUN

3725

P05412

0.63

LMAN1

3998

P49257

0.63

MLH1

4292

P40692

0.63

MNDA

4332

P41218

0.63

MOV10

4343

Q9HCE1

0.63

SEPT2

4735

Q15019

0.63

NEDD8

4738

Q15843

0.63

NTRK1

4914

P04629

0.63

RPA1

6117

P27694

0.63

RPA2

6118

P15927

0.63

RPA3

6119

P35244

0.63

STAU1

6780

O95793

0.63

STK4

6789

Q13043

0.63

XPO1

7514

O14980

0.63

HERC2

8924

O95714

0.63

AIM2

9447

O14862

0.63

DHX38

9785

Q92620

0.63

CUL7

9820

Q14999

0.63

NXF1

10482

Q9UBU9

0.63

SNW1

22938

Q13573

0.63

OBSL1

23363

O75147

0.63

SUZ12

23512

Q15022

0.63

FBXO25

26260

Q8TCJ0

0.63

FBXO6

26270

Q9NRD1

0.63

AGO1

26523

Q9UL18

0.63

AGO2

27161

Q9UKV8

0.63

SIRT7

51547

Q9NRC8

0.63

TMED9

54732

Q9BVK6

0.63

OTUB1

55611

Q96FW1

0.63

UBXN6

80700

Q9BZV1

0.63

CCDC8

83987

Q9H0W5

0.63

UNK

85451

Q9C0B0

0.63

PYHIN1

149628

Q6K0P9

0.63

RNF2

6045

Q99496

0.70

SHMT2

6472

P34897

0.70

FOXL1

2300

Q12952

0.72

SORT1

6272

Q99523

0.72

XRCC3

7517

O43542

0.72

IKBKG

8517

Q9Y6K9

0.72

MATR3

9782

P43243

0.72

SPG20

23111

Q8N0X7

0.72

FOXB1

27023

Q99853

0.72

BET1L

51272

Q9NYM9

0.72

ATG101

60673

Q9BSB4

0.72

DDA1

79016

Q9BW61

0.72

DSN1

79980

Q9H410

0.72

NUDCD1

84955

Q96RS6

0.72

FOXQ1

94234

Q9C009

0.72

FOXR1

283150

Q6PIV2

0.72

SUMO2

6613

P61956

0.73

UBD

10537

O15205

0.73

MTNR1B

4544

P49286

0.75

USP49

25862

Q70CQ1

0.76

ARFGAP1

55738

Q8N6T3

0.76

SUMO1

7341

P63165

0.78

TMED10

10972

P49755

0.78

COPG1

22820

Q9Y678

0.79

COPG2

26958

Q9UBF2

0.79

VCAM1

7412

P19320

0.82

COPB2

9276

P35606

0.93

COPE

11316

O14579

0.99