Gene Symbol | COPA |
Entrez ID | 1314 |
Uniprot ID | P53621 |
Description | coatomer protein complex subunit alpha |
Chromosomal Location | chr1: 160,289,273-160,343,400 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006886 |
intracellular protein transport |
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. |
IBA |
BP |
GO:0006888 |
ER to Golgi vesicle-mediated transport |
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi. |
IBA|TAS |
BP |
GO:0006890 |
retrograde vesicle-mediated transport, Golgi to ER |
The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG. |
IBA|TAS |
BP |
GO:0006891 |
intra-Golgi vesicle-mediated transport |
The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network). |
IBA |
BP |
GO:0030157 |
pancreatic juice secretion |
The regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine. Pancreatic juice is slightly alkaline and contains numerous enzymes and inactive enzyme precursors including alpha-amylase, chymotrypsinogen, lipase, procarboxypeptidase, proelastase, prophospholipase A2, ribonuclease, and trypsinogen. Its high concentration of bicarbonate ions helps to neutralize the acid from the stomach. |
IDA |
CC |
GO:0000139 |
Golgi membrane |
The lipid bilayer surrounding any of the compartments of the Golgi apparatus. |
TAS |
CC |
GO:0005615 |
extracellular space |
That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
IDA |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
CC |
GO:0005789 |
endoplasmic reticulum membrane |
The lipid bilayer surrounding the endoplasmic reticulum. |
TAS |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
TAS |
CC |
GO:0016020 |
membrane |
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
IDA |
CC |
GO:0030126 |
COPI vesicle coat |
One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state. |
IDA|ISS |
CC |
GO:0030133 |
transport vesicle |
Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell. |
TAS |
CC |
GO:0070062 |
extracellular exosome |
A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
IDA |
MF |
GO:0005179 |
hormone activity |
The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects; all bind receptors and trigger some biological process. |
IEA |
MF |
GO:0005198 |
structural molecule activity |
The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell. |
IEA |
Domain ID | Description |
---|---|
IPR001680 |
WD40 repeat |
IPR006692 |
Coatomer, WD associated region |
IPR010714 |
Coatomer, alpha subunit, C-terminal |
IPR011048 |
Cytochrome cd1-nitrite reductase-like, haem d1 domain |
IPR011990 |
Tetratricopeptide-like helical domain |
IPR015943 |
WD40/YVTN repeat-like-containing domain |
IPR016391 |
Coatomer alpha subunit |
IPR017986 |
WD40-repeat-containing domain |
IPR019775 |
WD40 repeat, conserved site |
IPR020472 |
G-protein beta WD-40 repeat |
IPR024977 |
Anaphase-promoting complex subunit 4, WD40 domain |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
h_arapPathway |
ADP-Ribosylation Factor |
BioCarta |
UMLS CUI | UMLS Term |
---|---|
C0003864 |
Arthritis |
C0004364 |
Autoimmune Diseases |
C0206062 |
Lung Diseases, Interstitial |
Tissue | Cell Type |
---|---|
adrenal gland |
glandular cells |
appendix |
glandular cells |
bone marrow |
hematopoietic cells |
colon |
glandular cells |
duodenum |
glandular cells |
epididymis |
glandular cells |
fallopian tube |
glandular cells |
gallbladder |
glandular cells |
heart muscle |
myocytes |
lymph node |
non-germinal center cells |
pancreas |
exocrine glandular cells |
parathyroid gland |
glandular cells |
placenta |
decidual cells |
placenta |
trophoblastic cells |
rectum |
glandular cells |
seminal vesicle |
glandular cells |
small intestine |
glandular cells |
stomach |
glandular cells |
tonsil |
non-germinal center cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
SEC24C |
9632 |
P53992 |
0.49 |
SEC23A |
10484 |
Q15436 |
0.49 |
SEPT9 |
10801 |
Q9UHD8 |
0.49 |
SF3B3 |
23450 |
Q15393 |
0.49 |
CCDC97 |
90324 |
Q96F63 |
0.49 |
SLC25A11 |
8402 |
Q02978 |
0.63 |
GEMIN2 |
8487 |
O14893 |
0.63 |
DDX20 |
11218 |
Q9UHI6 |
0.63 |
TCP1 |
6950 |
P17987 |
0.70 |
CCT3 |
7203 |
P49368 |
0.70 |
SMN1; SMN2 |
6606 |
Q16637 |
0.73 |
PDGFRB |
5159 |
P09619 |
0.74 |
SACM1L |
22908 |
Q9NTJ5 |
0.75 |
COPA |
1314 |
P53621 |
0.78 |
COPZ1 |
22818 |
P61923 |
0.86 |
ARCN1 |
372 |
P48444 |
0.87 |
COPB1 |
1315 |
P53618 |
0.95 |
NPHP1 |
4867 |
O15259 |
0.49 |
SRSF3 |
6428 |
P84103 |
0.49 |
OFD1 |
8481 |
O75665 |
0.49 |
TRIP10 |
9322 |
Q15642 |
0.49 |
KHDRBS1 |
10657 |
Q07666 |
0.49 |
GCN1 |
10985 |
Q92616 |
0.49 |
SF3B1 |
23451 |
O75533 |
0.49 |
WBP1 |
23559 |
Q96G27 |
0.49 |
MKS1 |
54903 |
Q9NXB0 |
0.49 |
TMEM237 |
65062 |
Q96Q45 |
0.49 |
CEP128 |
145508 |
Q6ZU80 |
0.49 |
TMEM17 |
200728 |
Q86X19 |
0.49 |
STX8 |
9482 |
Q9UNK0 |
0.52 |
TMED2 |
10959 |
Q15363 |
0.52 |
CD8A |
925 |
P01732 |
0.63 |
CDC5L |
988 |
Q99459 |
0.63 |
CDK2 |
1017 |
P24941 |
0.63 |
CRY2 |
1408 |
Q49AN0 |
0.63 |
EGFR |
1956 |
P00533 |
0.63 |
ESR1 |
2099 |
P03372 |
0.63 |
IFI16 |
3428 |
Q16666 |
0.63 |
ITGA4 |
3676 |
P13612 |
0.63 |
JUN |
3725 |
P05412 |
0.63 |
LMAN1 |
3998 |
P49257 |
0.63 |
MLH1 |
4292 |
P40692 |
0.63 |
MNDA |
4332 |
P41218 |
0.63 |
MOV10 |
4343 |
Q9HCE1 |
0.63 |
SEPT2 |
4735 |
Q15019 |
0.63 |
NEDD8 |
4738 |
Q15843 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
RPA1 |
6117 |
P27694 |
0.63 |
RPA2 |
6118 |
P15927 |
0.63 |
RPA3 |
6119 |
P35244 |
0.63 |
STAU1 |
6780 |
O95793 |
0.63 |
STK4 |
6789 |
Q13043 |
0.63 |
XPO1 |
7514 |
O14980 |
0.63 |
HERC2 |
8924 |
O95714 |
0.63 |
AIM2 |
9447 |
O14862 |
0.63 |
DHX38 |
9785 |
Q92620 |
0.63 |
CUL7 |
9820 |
Q14999 |
0.63 |
NXF1 |
10482 |
Q9UBU9 |
0.63 |
SNW1 |
22938 |
Q13573 |
0.63 |
OBSL1 |
23363 |
O75147 |
0.63 |
SUZ12 |
23512 |
Q15022 |
0.63 |
FBXO25 |
26260 |
Q8TCJ0 |
0.63 |
FBXO6 |
26270 |
Q9NRD1 |
0.63 |
AGO1 |
26523 |
Q9UL18 |
0.63 |
AGO2 |
27161 |
Q9UKV8 |
0.63 |
SIRT7 |
51547 |
Q9NRC8 |
0.63 |
TMED9 |
54732 |
Q9BVK6 |
0.63 |
OTUB1 |
55611 |
Q96FW1 |
0.63 |
UBXN6 |
80700 |
Q9BZV1 |
0.63 |
CCDC8 |
83987 |
Q9H0W5 |
0.63 |
UNK |
85451 |
Q9C0B0 |
0.63 |
PYHIN1 |
149628 |
Q6K0P9 |
0.63 |
RNF2 |
6045 |
Q99496 |
0.70 |
SHMT2 |
6472 |
P34897 |
0.70 |
FOXL1 |
2300 |
Q12952 |
0.72 |
SORT1 |
6272 |
Q99523 |
0.72 |
XRCC3 |
7517 |
O43542 |
0.72 |
IKBKG |
8517 |
Q9Y6K9 |
0.72 |
MATR3 |
9782 |
P43243 |
0.72 |
SPG20 |
23111 |
Q8N0X7 |
0.72 |
FOXB1 |
27023 |
Q99853 |
0.72 |
BET1L |
51272 |
Q9NYM9 |
0.72 |
ATG101 |
60673 |
Q9BSB4 |
0.72 |
DDA1 |
79016 |
Q9BW61 |
0.72 |
DSN1 |
79980 |
Q9H410 |
0.72 |
NUDCD1 |
84955 |
Q96RS6 |
0.72 |
FOXQ1 |
94234 |
Q9C009 |
0.72 |
FOXR1 |
283150 |
Q6PIV2 |
0.72 |
SUMO2 |
6613 |
P61956 |
0.73 |
UBD |
10537 |
O15205 |
0.73 |
MTNR1B |
4544 |
P49286 |
0.75 |
USP49 |
25862 |
Q70CQ1 |
0.76 |
ARFGAP1 |
55738 |
Q8N6T3 |
0.76 |
SUMO1 |
7341 |
P63165 |
0.78 |
TMED10 |
10972 |
P49755 |
0.78 |
COPG1 |
22820 |
Q9Y678 |
0.79 |
COPG2 |
26958 |
Q9UBF2 |
0.79 |
VCAM1 |
7412 |
P19320 |
0.82 |
COPB2 |
9276 |
P35606 |
0.93 |
COPE |
11316 |
O14579 |
0.99 |