| Gene Symbol | TRA2A |
| Entrez ID | 29896 |
| Uniprot ID | Q13595 |
| Description | transformer 2 alpha homolog (Drosophila) |
| Chromosomal Location | chr7: 23,504,780-23,532,041 |
| Ontology | GO ID | GO Term | Definition | Evidence |
|---|---|---|---|---|
|
BP |
GO:0000398 |
mRNA splicing, via spliceosome |
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. |
IDA |
|
CC |
GO:0005634 |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
IDA |
|
CC |
GO:0005730 |
nucleolus |
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
IDA |
|
CC |
GO:0043231 |
intracellular membrane-bounded organelle |
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
IDA |
|
MF |
GO:0000166 |
nucleotide binding |
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
IEA |
|
MF |
GO:0044822 |
poly(A) RNA binding |
Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases. |
IDA |
| Domain ID | Description |
|---|---|
|
IPR000504 |
RNA recognition motif domain |
| Pathway ID | Pathway Term | Pathway Source |
|---|---|---|
|
hsa03040 |
Spliceosome |
KEGG |
| UMLS CUI | UMLS Term |
|---|---|
|
C0037274 |
Dermatologic Disorders |
|
C0311375 |
Arsenic Poisoning |
| Tissue | Cell Type |
|---|---|
|
heart muscle |
myocytes |
|
kidney |
cells in tubules |
|
pancreas |
exocrine glandular cells |
|
smooth muscle |
smooth muscle cells |
| Pubmed ID | Author | Year | Title |
|---|---|---|---|
|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
| Gene Symbol | Entrez ID | Uniprot ID | Score |
|---|---|---|---|
|
CSNK1D |
1453 |
P48730 |
0.63 |
|
CSNK1E |
1454 |
P49674 |
0.63 |
|
ELAVL2 |
1993 |
Q12926 |
0.63 |
|
LBP |
3929 |
P18428 |
0.63 |
|
MOV10 |
4343 |
Q9HCE1 |
0.63 |
|
PNN |
5411 |
Q9H307 |
0.63 |
|
RBBP6 |
5930 |
Q7Z6E9 |
0.63 |
|
UPF1 |
5976 |
Q92900 |
0.63 |
|
RPL6 |
6128 |
Q02878 |
0.63 |
|
SRSF7 |
6432 |
Q16629 |
0.63 |
|
TRA2B |
6434 |
P62995 |
0.63 |
|
SRP14 |
6727 |
P37108 |
0.63 |
|
DAP3 |
7818 |
P51398 |
0.63 |
|
PABPC4 |
8761 |
Q13310 |
0.63 |
|
PRPF3 |
9129 |
O43395 |
0.63 |
|
RRP9 |
9136 |
O43818 |
0.63 |
|
PPIG |
9360 |
Q13427 |
0.63 |
|
ZC3H11A |
9877 |
O75152 |
0.63 |
|
THRAP3 |
9967 |
Q9Y2W1 |
0.63 |
|
MRPS31 |
10240 |
Q92665 |
0.63 |
|
SRRM1 |
10250 |
Q8IYB3 |
0.63 |
|
PAIP1 |
10605 |
Q9H074 |
0.63 |
|
SRSF8 |
10929 |
Q9BRL6 |
0.63 |
|
CASC3 |
22794 |
O15234 |
0.63 |
|
MRPS27 |
23107 |
Q92552 |
0.63 |
|
LARP1 |
23367 |
Q6PKG0 |
0.63 |
|
SRRM2 |
23524 |
Q9UQ35 |
0.63 |
|
MKRN1 |
23608 |
Q9UHC7 |
0.63 |
|
MKRN2 |
23609 |
Q9H000 |
0.63 |
|
PTCD1 |
26024 |
O75127 |
0.63 |
|
GAPDHS |
26330 |
O14556 |
0.63 |
|
TRUB2 |
26995 |
O95900 |
0.63 |
|
MRPS18B |
28973 |
Q9Y676 |
0.63 |
|
MTERF3 |
51001 |
Q96E29 |
0.63 |
|
MRPS18C |
51023 |
Q9Y3D5 |
0.63 |
|
MRPS7 |
51081 |
Q9Y2R9 |
0.63 |
|
MRPS2 |
51116 |
Q9Y399 |
0.63 |
|
RPL26L1 |
51121 |
Q9UNX3 |
0.63 |
|
NGRN |
51335 |
Q9NPE2 |
0.63 |
|
LARP7 |
51574 |
Q4G0J3 |
0.63 |
|
SRRT |
51593 |
Q9BXP5 |
0.63 |
|
LUC7L2 |
51631 |
Q9Y383 |
0.63 |
|
MRPS23 |
51649 |
Q9Y3D9 |
0.63 |
|
MRPS33 |
51650 |
Q9Y291 |
0.63 |
|
ZFR |
51663 |
Q96KR1 |
0.63 |
|
PHAX |
51808 |
Q9H814 |
0.63 |
|
GAR1 |
54433 |
Q9NY12 |
0.63 |
|
MRPS21 |
54460 |
P82921 |
0.63 |
|
PTCD3 |
55037 |
Q96EY7 |
0.63 |
|
LARP1B |
55132 |
Q659C4 |
0.63 |
|
MRPS10 |
55173 |
P82664 |
0.63 |
|
WDR33 |
55339 |
Q9C0J8 |
0.63 |
|
NCBP3 |
55421 |
Q53F19 |
0.63 |
|
LUC7L |
55692 |
Q9NQ29 |
0.63 |
|
MEPCE |
56257 |
Q7L2J0 |
0.63 |
|
PEO1 |
56652 |
Q96RR1 |
0.63 |
|
MRPS22 |
56945 |
P82650 |
0.63 |
|
ISY1 |
57461 |
Q9ULR0 |
0.63 |
|
MRPS35 |
60488 |
P82673 |
0.63 |
|
MRPS14 |
63931 |
O60783 |
0.63 |
|
MRPS25 |
64432 |
P82663 |
0.63 |
|
MRPS26 |
64949 |
Q9BYN8 |
0.63 |
|
MRPS24 |
64951 |
Q96EL2 |
0.63 |
|
MRPS15 |
64960 |
P82914 |
0.63 |
|
MRPS11 |
64963 |
P82912 |
0.63 |
|
MRPS9 |
64965 |
P82933 |
0.63 |
|
MRPS6 |
64968 |
P82932 |
0.63 |
|
MRPS5 |
64969 |
P82675 |
0.63 |
|
MRPL34 |
64981 |
Q9BQ48 |
0.63 |
|
MRPL32 |
64983 |
Q9BYC8 |
0.63 |
|
ZNF768 |
79724 |
Q9H5H4 |
0.63 |
|
NOA1 |
84273 |
Q8NC60 |
0.63 |
|
ZCCHC3 |
85364 |
Q9NUD5 |
0.63 |
|
PABPC4L |
132430 |
P0CB38 |
0.63 |
|
SRSF12 |
135295 |
Q8WXF0 |
0.63 |
|
APOBEC3F |
200316 |
Q8IUX4 |
0.63 |
|
HIST1H2AG; HIST1H2AI; HIST1H2AK; HIST1H2AL; HIST1H2AM |
8329 |
P0C0S8 |
0.63 |
|
CLK2 |
1196 |
P49760 |
0.70 |
|
CLK1 |
1195 |
P49759 |
0.75 |
|
SRPK2 |
6733 |
P78362 |
0.80 |
|
YTHDC1 |
91746 |
Q96MU7 |
0.82 |
|
CDC5L |
988 |
Q99459 |
0.49 |
|
SEPT7 |
989 |
Q16181 |
0.49 |
|
EWSR1 |
2130 |
Q01844 |
0.49 |
|
HNRNPC |
3183 |
P07910 |
0.49 |
|
HNRNPU |
3192 |
Q00839 |
0.49 |
|
IK |
3550 |
Q13123 |
0.49 |
|
HNRNPM |
4670 |
P52272 |
0.49 |
|
SEPT2 |
4735 |
Q15019 |
0.49 |
|
NFIA |
4774 |
Q12857 |
0.49 |
|
SNU13 |
4809 |
P55769 |
0.49 |
|
PLEC |
5339 |
Q15149 |
0.49 |
|
S100A9 |
6280 |
P06702 |
0.49 |
|
SRSF3 |
6428 |
P84103 |
0.49 |
|
SRSF5 |
6430 |
Q13243 |
0.49 |
|
SRSF6 |
6431 |
Q13247 |
0.49 |
|
SMARCB1 |
6598 |
Q12824 |
0.49 |
|
TAF9 |
6880 |
Q16594 |
0.49 |
|
BUD31 |
8896 |
P41223 |
0.49 |
|
SAP18 |
10284 |
O00422 |
0.49 |
|
SF3A1 |
10291 |
Q15459 |
0.49 |
|
CNTRL |
11064 |
Q7Z7A1 |
0.49 |
|
NCSTN |
23385 |
Q92542 |
0.49 |
|
SF3B3 |
23450 |
Q15393 |
0.49 |
|
PRPF6 |
24148 |
O94906 |
0.49 |
|
PHGDH |
26227 |
O43175 |
0.49 |
|
HP1BP3 |
50809 |
Q5SSJ5 |
0.49 |
|
SF3B6 |
51639 |
Q9Y3B4 |
0.49 |
|
PRPF40A |
55660 |
O75400 |
0.49 |
|
RBM25 |
58517 |
P49756 |
0.49 |
|
BARD1 |
580 |
Q99728 |
0.63 |
|
BMI1 |
648 |
P35226 |
0.63 |
|
CRABP1 |
1381 |
P29762 |
0.63 |
|
DHX15 |
1665 |
O43143 |
0.63 |
|
ELAVL1 |
1994 |
Q15717 |
0.63 |
|
EZH2 |
2146 |
Q15910 |
0.63 |
|
NTRK1 |
4914 |
P04629 |
0.63 |
|
PPP1CC |
5501 |
P36873 |
0.63 |
|
RNF2 |
6045 |
Q99496 |
0.63 |
|
TADA2A |
6871 |
O75478 |
0.63 |
|
TNNT1 |
7138 |
P13805 |
0.63 |
|
SUMO1 |
7341 |
P63165 |
0.63 |
|
ZNF22 |
7570 |
P17026 |
0.63 |
|
CUL5 |
8065 |
Q93034 |
0.63 |
|
CUL3 |
8452 |
Q13618 |
0.63 |
|
EED |
8726 |
O75530 |
0.63 |
|
SELENBP1 |
8991 |
Q13228 |
0.63 |
|
CDK2AP2 |
10263 |
O75956 |
0.63 |
|
NXF1 |
10482 |
Q9UBU9 |
0.63 |
|
RNPS1 |
10921 |
Q15287 |
0.63 |
|
SMAP |
10944 |
O00193 |
0.63 |
|
COPS5 |
10987 |
Q92905 |
0.63 |
|
NUDT21 |
11051 |
O43809 |
0.63 |
|
GABARAP |
11337 |
O95166 |
0.63 |
|
GABARAPL2 |
11345 |
P60520 |
0.63 |
|
PAXIP1 |
22976 |
Q6ZW49 |
0.63 |
|
U2SURP |
23350 |
O15042 |
0.63 |
|
OBSL1 |
23363 |
O75147 |
0.63 |
|
SUZ12 |
23512 |
Q15022 |
0.63 |
|
GABARAPL1 |
23710 |
Q9H0R8 |
0.63 |
|
DDX41 |
51428 |
Q9UJV9 |
0.63 |
|
SNIP1 |
79753 |
Q8TAD8 |
0.63 |
|
MAP1LC3B |
81631 |
Q9GZQ8 |
0.63 |
|
MAP1LC3A |
84557 |
Q9H492 |
0.63 |
|
CDK6 |
1021 |
Q00534 |
0.70 |
|
CDK2 |
1017 |
P24941 |
0.72 |
|
FEN1 |
2237 |
P39748 |
0.72 |
|
MAGOH |
4116 |
P61326 |
0.72 |
|
EIF4A3 |
9775 |
P38919 |
0.72 |
|
SUMO2 |
6613 |
P61956 |
0.73 |
|
SRSF10 |
10772 |
O75494 |
0.73 |
|
YWHAG |
7532 |
P61981 |
0.86 |
|
CLK3 |
1198 |
P49761 |
0.88 |