Gene Symbol | COL4A3 |
Entrez ID | 1285 |
Uniprot ID | Q01955 |
Description | collagen, type IV, alpha 3 (Goodpasture antigen) |
Chromosomal Location | chr2: 227,164,565-227,314,792 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006919 |
activation of cysteine-type endopeptidase activity involved in apoptotic process |
Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process. |
IDA |
BP |
GO:0007155 |
cell adhesion |
The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
IEA |
BP |
GO:0007166 |
cell surface receptor signaling pathway |
A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription. |
NAS |
BP |
GO:0007605 |
sensory perception of sound |
The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound. |
TAS |
BP |
GO:0008015 |
blood circulation |
The flow of blood through the body of an animal, enabling the transport of nutrients to the tissues and the removal of waste products. |
TAS |
BP |
GO:0008283 |
cell proliferation |
The multiplication or reproduction of cells, resulting in the expansion of a cell population. |
IDA |
BP |
GO:0008285 |
negative regulation of cell proliferation |
Any process that stops, prevents or reduces the rate or extent of cell proliferation. |
TAS |
BP |
GO:0009749 |
response to glucose |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus. |
IEA |
BP |
GO:0010951 |
negative regulation of endopeptidase activity |
Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins. |
IEA |
BP |
GO:0016525 |
negative regulation of angiogenesis |
Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis. |
IDA |
BP |
GO:0030198 |
extracellular matrix organization |
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix. |
TAS |
BP |
GO:0030574 |
collagen catabolic process |
The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells. |
TAS |
BP |
GO:0032836 |
glomerular basement membrane development |
The process whose specific outcome is the progression of the glomerular basement membrane over time, from its formation to the mature structure. The glomerular basement membrane is the basal laminal portion of the glomerulus which performs the actual filtration. |
ISS |
BP |
GO:0072577 |
endothelial cell apoptotic process |
Any apoptotic process in an endothelial cell. An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. |
IDA |
CC |
GO:0005576 |
extracellular region |
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
TAS |
CC |
GO:0005587 |
collagen type IV trimer |
A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes. |
IDA |
CC |
GO:0005604 |
basement membrane |
A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers. |
IDA |
CC |
GO:0005783 |
endoplasmic reticulum |
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
IDA |
CC |
GO:0005788 |
endoplasmic reticulum lumen |
The volume enclosed by the membranes of the endoplasmic reticulum. |
TAS |
CC |
GO:0043231 |
intracellular membrane-bounded organelle |
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
IDA |
MF |
GO:0005178 |
integrin binding |
Interacting selectively and non-covalently with an integrin. |
IDA|TAS |
MF |
GO:0005198 |
structural molecule activity |
The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell. |
NAS |
MF |
GO:0005201 |
extracellular matrix structural constituent |
The action of a molecule that contributes to the structural integrity of the extracellular matrix. |
IEA |
MF |
GO:0005515 |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IPI |
MF |
GO:0008191 |
metalloendopeptidase inhibitor activity |
Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity. |
NAS |
Domain ID | Description |
---|---|
IPR001442 |
Collagen IV, non-collagenous |
IPR008160 |
Collagen triple helix repeat |
IPR016187 |
C-type lectin fold |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa04151 |
PI3K-Akt signaling pathway |
KEGG |
hsa04510 |
Focal adhesion |
KEGG |
hsa04512 |
ECM-receptor interaction |
KEGG |
hsa04933 |
AGE-RAGE signaling pathway in diabetic complications |
KEGG |
hsa04974 |
Protein digestion and absorption |
KEGG |
hsa05146 |
Amoebiasis |
KEGG |
hsa05200 |
Pathways in cancer |
KEGG |
hsa05222 |
Small cell lung cancer |
KEGG |
WP2572 |
Primary Focal Segmental Glomerulosclerosis FSGS |
WikiPathways |
h_amiPathway |
Acute Myocardial Infarction |
BioCarta |
h_ace2Pathway |
Angiotensin-converting enzyme 2 regulates heart function |
BioCarta |
h_intrinsicPathway |
Intrinsic Prothrombin Activation Pathway |
BioCarta |
h_plateletAppPathway |
Platelet Amyloid Precursor Protein Pathway |
BioCarta |
h_npp1Pathway |
Regulators of Bone Mineralization |
BioCarta |
h_vitCBPathway |
Vitamin C in the Brain |
BioCarta |
UMLS CUI | UMLS Term |
---|---|
C0027706 |
Hereditary Nephritis |
C1567743 |
Alport Syndrome, Autosomal Dominant |
C1567744 |
Alport Syndrome, Autosomal Recessive |
Pubmed ID | Author | Year | Title |
---|---|---|---|
12734205 |
Wood et al. |
2003 |
The Molecular Phenotype of Polycystic Ovary Syndrome (PCOS) Theca Cells and New Candidate PCOS Genes Defined by Microarray Analysis |
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
APP |
351 |
P05067 |
0.52 |
COL4A4 |
1286 |
P53420 |
0.52 |
COL4A5 |
1287 |
P29400 |
0.52 |
KLK6 |
5653 |
Q92876 |
0.68 |
CAMK2B |
816 |
Q13554 |
0.52 |
DCN |
1634 |
P07585 |
0.52 |
FN1 |
2335 |
P02751 |
0.52 |
HABP2 |
3026 |
Q14520 |
0.52 |
MMP9 |
4318 |
P14780 |
0.52 |
OSM |
5008 |
P13725 |
0.52 |
SERPINE2 |
5270 |
P07093 |
0.52 |
TGFBI |
7045 |
Q15582 |
0.52 |
USH2A |
7399 |
O75445 |
0.52 |
COL4A3BP |
10087 |
Q9Y5P4 |
0.52 |
CD93 |
22918 |
Q9NPY3 |
0.52 |
ANTXR2 |
118429 |
P58335 |
0.52 |
FBLN2 |
2199 |
P98095 |
0.62 |
MATN2 |
4147 |
O00339 |
0.62 |
MOV10 |
4343 |
Q9HCE1 |
0.63 |
SHMT2 |
6472 |
P34897 |
0.63 |
VHL |
7428 |
P40337 |
0.73 |
MFAP2 |
4237 |
P55001 |
0.75 |