Protein Description

Gene Symbol COL4A3
Entrez ID 1285
Uniprot ID Q01955
Description collagen, type IV, alpha 3 (Goodpasture antigen)
Chromosomal Location chr2: 227,164,565-227,314,792
Ontology GO ID GO Term Definition Evidence

BP

GO:0006919

activation of cysteine-type endopeptidase activity involved in apoptotic process

Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process.

IDA

BP

GO:0007155

cell adhesion

The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.

IEA

BP

GO:0007166

cell surface receptor signaling pathway

A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription.

NAS

BP

GO:0007605

sensory perception of sound

The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound.

TAS

BP

GO:0008015

blood circulation

The flow of blood through the body of an animal, enabling the transport of nutrients to the tissues and the removal of waste products.

TAS

BP

GO:0008283

cell proliferation

The multiplication or reproduction of cells, resulting in the expansion of a cell population.

IDA

BP

GO:0008285

negative regulation of cell proliferation

Any process that stops, prevents or reduces the rate or extent of cell proliferation.

TAS

BP

GO:0009749

response to glucose

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus.

IEA

BP

GO:0010951

negative regulation of endopeptidase activity

Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.

IEA

BP

GO:0016525

negative regulation of angiogenesis

Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis.

IDA

BP

GO:0030198

extracellular matrix organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix.

TAS

BP

GO:0030574

collagen catabolic process

The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells.

TAS

BP

GO:0032836

glomerular basement membrane development

The process whose specific outcome is the progression of the glomerular basement membrane over time, from its formation to the mature structure. The glomerular basement membrane is the basal laminal portion of the glomerulus which performs the actual filtration.

ISS

BP

GO:0072577

endothelial cell apoptotic process

Any apoptotic process in an endothelial cell. An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal.

IDA

CC

GO:0005576

extracellular region

The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

TAS

CC

GO:0005587

collagen type IV trimer

A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes.

IDA

CC

GO:0005604

basement membrane

A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers.

IDA

CC

GO:0005783

endoplasmic reticulum

The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).

IDA

CC

GO:0005788

endoplasmic reticulum lumen

The volume enclosed by the membranes of the endoplasmic reticulum.

TAS

CC

GO:0043231

intracellular membrane-bounded organelle

Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.

IDA

MF

GO:0005178

integrin binding

Interacting selectively and non-covalently with an integrin.

IDA|TAS

MF

GO:0005198

structural molecule activity

The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell.

NAS

MF

GO:0005201

extracellular matrix structural constituent

The action of a molecule that contributes to the structural integrity of the extracellular matrix.

IEA

MF

GO:0005515

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

IPI

MF

GO:0008191

metalloendopeptidase inhibitor activity

Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity.

NAS

Domain ID Description

IPR001442

Collagen IV, non-collagenous

IPR008160

Collagen triple helix repeat

IPR016187

C-type lectin fold

Pathway ID Pathway Term Pathway Source

hsa04151

PI3K-Akt signaling pathway

KEGG

hsa04510

Focal adhesion

KEGG

hsa04512

ECM-receptor interaction

KEGG

hsa04933

AGE-RAGE signaling pathway in diabetic complications

KEGG

hsa04974

Protein digestion and absorption

KEGG

hsa05146

Amoebiasis

KEGG

hsa05200

Pathways in cancer

KEGG

hsa05222

Small cell lung cancer

KEGG

WP2572

Primary Focal Segmental Glomerulosclerosis FSGS

WikiPathways

h_amiPathway

Acute Myocardial Infarction

BioCarta

h_ace2Pathway

Angiotensin-converting enzyme 2 regulates heart function

BioCarta

h_intrinsicPathway

Intrinsic Prothrombin Activation Pathway

BioCarta

h_plateletAppPathway

Platelet Amyloid Precursor Protein Pathway

BioCarta

h_npp1Pathway

Regulators of Bone Mineralization

BioCarta

h_vitCBPathway

Vitamin C in the Brain

BioCarta

UMLS CUI UMLS Term

C0027706

Hereditary Nephritis

C1567743

Alport Syndrome, Autosomal Dominant

C1567744

Alport Syndrome, Autosomal Recessive

No tissues found.

No databases found.

Pubmed ID Author Year Title

12734205

Wood et al.

2003

The Molecular Phenotype of Polycystic Ovary Syndrome (PCOS) Theca Cells and New Candidate PCOS Genes Defined by Microarray Analysis

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

Gene Symbol Entrez ID Uniprot ID Score

APP

351

P05067

0.52

COL4A4

1286

P53420

0.52

COL4A5

1287

P29400

0.52

KLK6

5653

Q92876

0.68

CAMK2B

816

Q13554

0.52

DCN

1634

P07585

0.52

FN1

2335

P02751

0.52

HABP2

3026

Q14520

0.52

MMP9

4318

P14780

0.52

OSM

5008

P13725

0.52

SERPINE2

5270

P07093

0.52

TGFBI

7045

Q15582

0.52

USH2A

7399

O75445

0.52

COL4A3BP

10087

Q9Y5P4

0.52

CD93

22918

Q9NPY3

0.52

ANTXR2

118429

P58335

0.52

FBLN2

2199

P98095

0.62

MATN2

4147

O00339

0.62

MOV10

4343

Q9HCE1

0.63

SHMT2

6472

P34897

0.63

VHL

7428

P40337

0.73

MFAP2

4237

P55001

0.75