Gene Symbol | COL4A2 |
Entrez ID | 1284 |
Uniprot ID | P08572 |
Description | collagen, type IV, alpha 2 |
Chromosomal Location | chr13: 110,305,812-110,513,027 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0001525 |
angiogenesis |
Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels. |
IEA |
BP |
GO:0006351 |
transcription, DNA-templated |
The cellular synthesis of RNA on a template of DNA. |
IEA |
BP |
GO:0016525 |
negative regulation of angiogenesis |
Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis. |
IDA |
BP |
GO:0030198 |
extracellular matrix organization |
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix. |
NAS|TAS |
BP |
GO:0030574 |
collagen catabolic process |
The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells. |
TAS |
BP |
GO:0035987 |
endodermal cell differentiation |
The process in which a relatively unspecialized cell acquires the specialized features of an endoderm cell, a cell of the inner of the three germ layers of the embryo. |
IEP |
BP |
GO:0071560 |
cellular response to transforming growth factor beta stimulus |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus. |
IEA |
CC |
GO:0005576 |
extracellular region |
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
TAS |
CC |
GO:0005587 |
collagen type IV trimer |
A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes. |
TAS |
CC |
GO:0005788 |
endoplasmic reticulum lumen |
The volume enclosed by the membranes of the endoplasmic reticulum. |
TAS |
CC |
GO:0031012 |
extracellular matrix |
A structure lying external to one or more cells, which provides structural support for cells or tissues. |
IDA|ISS|TAS |
CC |
GO:0043231 |
intracellular membrane-bounded organelle |
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
IDA |
CC |
GO:0070062 |
extracellular exosome |
A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
IDA |
MF |
GO:0005201 |
extracellular matrix structural constituent |
The action of a molecule that contributes to the structural integrity of the extracellular matrix. |
TAS |
Domain ID | Description |
---|---|
IPR001442 |
Collagen IV, non-collagenous |
IPR008160 |
Collagen triple helix repeat |
IPR016187 |
C-type lectin fold |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa04151 |
PI3K-Akt signaling pathway |
KEGG |
hsa04510 |
Focal adhesion |
KEGG |
hsa04512 |
ECM-receptor interaction |
KEGG |
hsa04933 |
AGE-RAGE signaling pathway in diabetic complications |
KEGG |
hsa04974 |
Protein digestion and absorption |
KEGG |
hsa05146 |
Amoebiasis |
KEGG |
hsa05200 |
Pathways in cancer |
KEGG |
hsa05222 |
Small cell lung cancer |
KEGG |
WP306 |
Focal Adhesion |
WikiPathways |
WP3646 |
Hepatitis C and Hepatocellular Carcinoma |
WikiPathways |
WP2911 |
miRNA targets in ECM and membrane receptors |
WikiPathways |
WP3932 |
Focal Adhesion-PI3K-Akt-mTOR-signaling pathway |
WikiPathways |
h_amiPathway |
Acute Myocardial Infarction |
BioCarta |
h_ace2Pathway |
Angiotensin-converting enzyme 2 regulates heart function |
BioCarta |
h_intrinsicPathway |
Intrinsic Prothrombin Activation Pathway |
BioCarta |
h_plateletAppPathway |
Platelet Amyloid Precursor Protein Pathway |
BioCarta |
h_npp1Pathway |
Regulators of Bone Mineralization |
BioCarta |
h_vitCBPathway |
Vitamin C in the Brain |
BioCarta |
UMLS CUI | UMLS Term |
---|---|
C0019191 |
Infectious Canine Hepatitis |
C0027726 |
Nephrotic Syndrome |
C0149925 |
Small Cell Carcinoma Of Lung |
C1867983 |
Porencephaly, Familial |
Tissue | Cell Type |
---|---|
cerebral cortex |
endothelial cells |
colon |
endothelial cells |
duodenum |
glandular cells |
endometrium |
cells in endometrial stroma |
gallbladder |
glandular cells |
heart muscle |
myocytes |
lung |
pneumocytes |
pancreas |
exocrine glandular cells |
skeletal muscle |
myocytes |
small intestine |
glandular cells |
smooth muscle |
smooth muscle cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
ITGA6 |
3655 |
P23229 |
0.00 |
ITGA3 |
3675 |
P26006 |
0.00 |
ITGA4 |
3676 |
P13612 |
0.00 |
ITGA7 |
3679 |
Q13683 |
0.00 |
ITGA9 |
3680 |
Q13797 |
0.00 |
ITGAV |
3685 |
P06756 |
0.00 |
ITGB1 |
3688 |
P05556 |
0.00 |
ITGB3 |
3690 |
P05106 |
0.00 |
ITGB5 |
3693 |
P18084 |
0.00 |
ITGB8 |
3696 |
P26012 |
0.00 |
ITGA11 |
22801 |
Q9UKX5 |
0.00 |
TNPO3 |
23534 |
Q9Y5L0 |
0.49 |
APP |
351 |
P05067 |
0.52 |
KLK6 |
5653 |
Q92876 |
0.68 |
COL4A2 |
1284 |
P08572 |
0.78 |
BGN |
633 |
P21810 |
0.52 |
BMP3 |
651 |
P12645 |
0.52 |
FN1 |
2335 |
P02751 |
0.52 |
HABP2 |
3026 |
Q14520 |
0.52 |
MMP9 |
4318 |
P14780 |
0.52 |
OSM |
5008 |
P13725 |
0.52 |
SERPINE2 |
5270 |
P07093 |
0.52 |
TGFBI |
7045 |
Q15582 |
0.52 |
CD93 |
22918 |
Q9NPY3 |
0.52 |
ANTXR2 |
118429 |
P58335 |
0.52 |
FBLN2 |
2199 |
P98095 |
0.62 |
MATN2 |
4147 |
O00339 |
0.62 |
ANXA7 |
310 |
P20073 |
0.63 |
C1QB |
713 |
P02746 |
0.63 |
SERPINA6 |
866 |
P08185 |
0.63 |
COL8A2 |
1296 |
P25067 |
0.63 |
COL9A1 |
1297 |
P20849 |
0.63 |
CSNK2B |
1460 |
P67870 |
0.63 |
FGL1 |
2267 |
Q08830 |
0.63 |
PTPRK |
5796 |
Q15262 |
0.63 |
SEMG1 |
6406 |
P04279 |
0.63 |
SKIL |
6498 |
P12757 |
0.63 |
TK1 |
7083 |
P04183 |
0.63 |
STBD1 |
8987 |
O95210 |
0.63 |
KIAA0101 |
9768 |
Q15004 |
0.63 |
DAZAP2 |
9802 |
Q15038 |
0.63 |
FBXO6 |
26270 |
Q9NRD1 |
0.63 |
CELA2B |
51032 |
P08218 |
0.63 |
ATF7IP |
55729 |
Q6VMQ6 |
0.63 |
TMEM25 |
84866 |
Q86YD3 |
0.63 |
C1QTNF2 |
114898 |
Q9BXJ5 |
0.63 |
ITLN2 |
142683 |
Q8WWU7 |
0.63 |
C1QTNF9 |
338872 |
P0C862 |
0.63 |
CLPSL1 |
340204 |
A2RUU4 |
0.63 |
SMN1; SMN2 |
6606 |
Q16637 |
0.63 |
VHL |
7428 |
P40337 |
0.73 |
FAM46A |
55603 |
Q96IP4 |
0.73 |
COL4A1 |
1282 |
P02462 |
0.88 |