Protein Description

Gene Symbol COL4A2
Entrez ID 1284
Uniprot ID P08572
Description collagen, type IV, alpha 2
Chromosomal Location chr13: 110,305,812-110,513,027
Ontology GO ID GO Term Definition Evidence

BP

GO:0001525

angiogenesis

Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.

IEA

BP

GO:0006351

transcription, DNA-templated

The cellular synthesis of RNA on a template of DNA.

IEA

BP

GO:0016525

negative regulation of angiogenesis

Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis.

IDA

BP

GO:0030198

extracellular matrix organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix.

NAS|TAS

BP

GO:0030574

collagen catabolic process

The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells.

TAS

BP

GO:0035987

endodermal cell differentiation

The process in which a relatively unspecialized cell acquires the specialized features of an endoderm cell, a cell of the inner of the three germ layers of the embryo.

IEP

BP

GO:0071560

cellular response to transforming growth factor beta stimulus

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus.

IEA

CC

GO:0005576

extracellular region

The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

TAS

CC

GO:0005587

collagen type IV trimer

A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes.

TAS

CC

GO:0005788

endoplasmic reticulum lumen

The volume enclosed by the membranes of the endoplasmic reticulum.

TAS

CC

GO:0031012

extracellular matrix

A structure lying external to one or more cells, which provides structural support for cells or tissues.

IDA|ISS|TAS

CC

GO:0043231

intracellular membrane-bounded organelle

Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.

IDA

CC

GO:0070062

extracellular exosome

A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

IDA

MF

GO:0005201

extracellular matrix structural constituent

The action of a molecule that contributes to the structural integrity of the extracellular matrix.

TAS

Domain ID Description

IPR001442

Collagen IV, non-collagenous

IPR008160

Collagen triple helix repeat

IPR016187

C-type lectin fold

Pathway ID Pathway Term Pathway Source

hsa04151

PI3K-Akt signaling pathway

KEGG

hsa04510

Focal adhesion

KEGG

hsa04512

ECM-receptor interaction

KEGG

hsa04933

AGE-RAGE signaling pathway in diabetic complications

KEGG

hsa04974

Protein digestion and absorption

KEGG

hsa05146

Amoebiasis

KEGG

hsa05200

Pathways in cancer

KEGG

hsa05222

Small cell lung cancer

KEGG

WP306

Focal Adhesion

WikiPathways

WP3646

Hepatitis C and Hepatocellular Carcinoma

WikiPathways

WP2911

miRNA targets in ECM and membrane receptors

WikiPathways

WP3932

Focal Adhesion-PI3K-Akt-mTOR-signaling pathway

WikiPathways

h_amiPathway

Acute Myocardial Infarction

BioCarta

h_ace2Pathway

Angiotensin-converting enzyme 2 regulates heart function

BioCarta

h_intrinsicPathway

Intrinsic Prothrombin Activation Pathway

BioCarta

h_plateletAppPathway

Platelet Amyloid Precursor Protein Pathway

BioCarta

h_npp1Pathway

Regulators of Bone Mineralization

BioCarta

h_vitCBPathway

Vitamin C in the Brain

BioCarta

UMLS CUI UMLS Term

C0019191

Infectious Canine Hepatitis

C0027726

Nephrotic Syndrome

C0149925

Small Cell Carcinoma Of Lung

C1867983

Porencephaly, Familial

Tissue Cell Type

cerebral cortex

endothelial cells

colon

endothelial cells

duodenum

glandular cells

endometrium

cells in endometrial stroma

gallbladder

glandular cells

heart muscle

myocytes

lung

pneumocytes

pancreas

exocrine glandular cells

skeletal muscle

myocytes

small intestine

glandular cells

smooth muscle

smooth muscle cells

No databases found.

Pubmed ID Author Year Title

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

22951915

Haozi et al.

2012

Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome

Gene Symbol Entrez ID Uniprot ID Score

ITGA6

3655

P23229

0.00

ITGA3

3675

P26006

0.00

ITGA4

3676

P13612

0.00

ITGA7

3679

Q13683

0.00

ITGA9

3680

Q13797

0.00

ITGAV

3685

P06756

0.00

ITGB1

3688

P05556

0.00

ITGB3

3690

P05106

0.00

ITGB5

3693

P18084

0.00

ITGB8

3696

P26012

0.00

ITGA11

22801

Q9UKX5

0.00

TNPO3

23534

Q9Y5L0

0.49

APP

351

P05067

0.52

KLK6

5653

Q92876

0.68

COL4A2

1284

P08572

0.78

BGN

633

P21810

0.52

BMP3

651

P12645

0.52

FN1

2335

P02751

0.52

HABP2

3026

Q14520

0.52

MMP9

4318

P14780

0.52

OSM

5008

P13725

0.52

SERPINE2

5270

P07093

0.52

TGFBI

7045

Q15582

0.52

CD93

22918

Q9NPY3

0.52

ANTXR2

118429

P58335

0.52

FBLN2

2199

P98095

0.62

MATN2

4147

O00339

0.62

ANXA7

310

P20073

0.63

C1QB

713

P02746

0.63

SERPINA6

866

P08185

0.63

COL8A2

1296

P25067

0.63

COL9A1

1297

P20849

0.63

CSNK2B

1460

P67870

0.63

FGL1

2267

Q08830

0.63

PTPRK

5796

Q15262

0.63

SEMG1

6406

P04279

0.63

SKIL

6498

P12757

0.63

TK1

7083

P04183

0.63

STBD1

8987

O95210

0.63

KIAA0101

9768

Q15004

0.63

DAZAP2

9802

Q15038

0.63

FBXO6

26270

Q9NRD1

0.63

CELA2B

51032

P08218

0.63

ATF7IP

55729

Q6VMQ6

0.63

TMEM25

84866

Q86YD3

0.63

C1QTNF2

114898

Q9BXJ5

0.63

ITLN2

142683

Q8WWU7

0.63

C1QTNF9

338872

P0C862

0.63

CLPSL1

340204

A2RUU4

0.63

SMN1; SMN2

6606

Q16637

0.63

VHL

7428

P40337

0.73

FAM46A

55603

Q96IP4

0.73

COL4A1

1282

P02462

0.88