| Gene Symbol | COL4A2 |
| Entrez ID | 1284 |
| Uniprot ID | P08572 |
| Description | collagen, type IV, alpha 2 |
| Chromosomal Location | chr13: 110,305,812-110,513,027 |
| Ontology | GO ID | GO Term | Definition | Evidence |
|---|---|---|---|---|
BP | GO:0001525 | angiogenesis |
Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels. | IEA |
BP | GO:0006351 | transcription, DNA-templated |
The cellular synthesis of RNA on a template of DNA. | IEA |
BP | GO:0016525 | negative regulation of angiogenesis |
Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis. | IDA |
BP | GO:0030198 | extracellular matrix organization |
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix. | NAS|TAS |
BP | GO:0030574 | collagen catabolic process |
The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells. | TAS |
BP | GO:0035987 | endodermal cell differentiation |
The process in which a relatively unspecialized cell acquires the specialized features of an endoderm cell, a cell of the inner of the three germ layers of the embryo. | IEP |
BP | GO:0071560 | cellular response to transforming growth factor beta stimulus |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus. | IEA |
CC | GO:0005576 | extracellular region |
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. | TAS |
CC | GO:0005587 | collagen type IV trimer |
A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes. | TAS |
CC | GO:0005788 | endoplasmic reticulum lumen |
The volume enclosed by the membranes of the endoplasmic reticulum. | TAS |
CC | GO:0031012 | extracellular matrix |
A structure lying external to one or more cells, which provides structural support for cells or tissues. | IDA|ISS|TAS |
CC | GO:0043231 | intracellular membrane-bounded organelle |
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. | IDA |
CC | GO:0070062 | extracellular exosome |
A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. | IDA |
MF | GO:0005201 | extracellular matrix structural constituent |
The action of a molecule that contributes to the structural integrity of the extracellular matrix. | TAS |
| Domain ID | Description |
|---|---|
IPR001442 | Collagen IV, non-collagenous |
IPR008160 | Collagen triple helix repeat |
IPR016187 | C-type lectin fold |
| Pathway ID | Pathway Term | Pathway Source |
|---|---|---|
hsa04151 | PI3K-Akt signaling pathway | KEGG |
hsa04510 | Focal adhesion | KEGG |
hsa04512 | ECM-receptor interaction | KEGG |
hsa04933 | AGE-RAGE signaling pathway in diabetic complications | KEGG |
hsa04974 | Protein digestion and absorption | KEGG |
hsa05146 | Amoebiasis | KEGG |
hsa05200 | Pathways in cancer | KEGG |
hsa05222 | Small cell lung cancer | KEGG |
WP306 | Focal Adhesion | WikiPathways |
WP3646 | Hepatitis C and Hepatocellular Carcinoma | WikiPathways |
WP2911 | miRNA targets in ECM and membrane receptors | WikiPathways |
WP3932 | Focal Adhesion-PI3K-Akt-mTOR-signaling pathway | WikiPathways |
h_amiPathway | Acute Myocardial Infarction | BioCarta |
h_ace2Pathway | Angiotensin-converting enzyme 2 regulates heart function | BioCarta |
h_intrinsicPathway | Intrinsic Prothrombin Activation Pathway | BioCarta |
h_plateletAppPathway | Platelet Amyloid Precursor Protein Pathway | BioCarta |
h_npp1Pathway | Regulators of Bone Mineralization | BioCarta |
h_vitCBPathway | Vitamin C in the Brain | BioCarta |
| UMLS CUI | UMLS Term |
|---|---|
C0019191 | Infectious Canine Hepatitis |
C0027726 | Nephrotic Syndrome |
C0149925 | Small Cell Carcinoma Of Lung |
C1867983 | Porencephaly, Familial |
| Tissue | Cell Type |
|---|---|
cerebral cortex | endothelial cells |
colon | endothelial cells |
duodenum | glandular cells |
endometrium | cells in endometrial stroma |
gallbladder | glandular cells |
heart muscle | myocytes |
lung | pneumocytes |
pancreas | exocrine glandular cells |
skeletal muscle | myocytes |
small intestine | glandular cells |
smooth muscle | smooth muscle cells |
| Pubmed ID | Author | Year | Title |
|---|---|---|---|
22617121 | Ouandaogo et al. | 2012 | Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
22951915 | Haozi et al. | 2012 | Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
| Gene Symbol | Entrez ID | Uniprot ID | Score |
|---|---|---|---|
ITGA6 | 3655 | P23229 | 0.0 |
ITGA3 | 3675 | P26006 | 0.0 |
ITGA4 | 3676 | P13612 | 0.0 |
ITGA7 | 3679 | Q13683 | 0.0 |
ITGA9 | 3680 | Q13797 | 0.0 |
ITGAV | 3685 | P06756 | 0.0 |
ITGB1 | 3688 | P05556 | 0.0 |
ITGB3 | 3690 | P05106 | 0.0 |
ITGB5 | 3693 | P18084 | 0.0 |
ITGB8 | 3696 | P26012 | 0.0 |
ITGA11 | 22801 | Q9UKX5 | 0.0 |
TNPO3 | 23534 | Q9Y5L0 | 0.49 |
APP | 351 | P05067 | 0.52 |
KLK6 | 5653 | Q92876 | 0.68 |
COL4A2 | 1284 | P08572 | 0.78 |
BGN | 633 | P21810 | 0.52 |
BMP3 | 651 | P12645 | 0.52 |
FN1 | 2335 | P02751 | 0.52 |
HABP2 | 3026 | Q14520 | 0.52 |
MMP9 | 4318 | P14780 | 0.52 |
OSM | 5008 | P13725 | 0.52 |
SERPINE2 | 5270 | P07093 | 0.52 |
TGFBI | 7045 | Q15582 | 0.52 |
CD93 | 22918 | Q9NPY3 | 0.52 |
ANTXR2 | 118429 | P58335 | 0.52 |
FBLN2 | 2199 | P98095 | 0.62 |
MATN2 | 4147 | O00339 | 0.62 |
ANXA7 | 310 | P20073 | 0.63 |
C1QB | 713 | P02746 | 0.63 |
SERPINA6 | 866 | P08185 | 0.63 |
COL8A2 | 1296 | P25067 | 0.63 |
COL9A1 | 1297 | P20849 | 0.63 |
CSNK2B | 1460 | P67870 | 0.63 |
FGL1 | 2267 | Q08830 | 0.63 |
PTPRK | 5796 | Q15262 | 0.63 |
SEMG1 | 6406 | P04279 | 0.63 |
SKIL | 6498 | P12757 | 0.63 |
TK1 | 7083 | P04183 | 0.63 |
STBD1 | 8987 | O95210 | 0.63 |
KIAA0101 | 9768 | Q15004 | 0.63 |
DAZAP2 | 9802 | Q15038 | 0.63 |
FBXO6 | 26270 | Q9NRD1 | 0.63 |
CELA2B | 51032 | P08218 | 0.63 |
ATF7IP | 55729 | Q6VMQ6 | 0.63 |
TMEM25 | 84866 | Q86YD3 | 0.63 |
C1QTNF2 | 114898 | Q9BXJ5 | 0.63 |
ITLN2 | 142683 | Q8WWU7 | 0.63 |
C1QTNF9 | 338872 | P0C862 | 0.63 |
CLPSL1 | 340204 | A2RUU4 | 0.63 |
SMN1; SMN2 | 6606 | Q16637 | 0.63 |
VHL | 7428 | P40337 | 0.73 |
FAM46A | 55603 | Q96IP4 | 0.73 |
COL4A1 | 1282 | P02462 | 0.88 |