| Gene Symbol | ZNF638 |
| Entrez ID | 27332 |
| Uniprot ID | Q14966 |
| Description | zinc finger protein 638 |
| Chromosomal Location | chr2: 71,276,561-71,435,069 |
| Ontology | GO ID | GO Term | Definition | Evidence |
|---|---|---|---|---|
|
BP |
GO:0006351 |
transcription, DNA-templated |
The cellular synthesis of RNA on a template of DNA. |
IEA |
|
BP |
GO:0006355 |
regulation of transcription, DNA-templated |
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
IEA |
|
BP |
GO:0008380 |
RNA splicing |
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. |
IEA |
|
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
IDA |
|
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
TAS |
|
CC |
GO:0016607 |
nuclear speck |
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy. |
IEA |
|
CC |
GO:0043231 |
intracellular membrane-bounded organelle |
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
IDA |
|
MF |
GO:0000166 |
nucleotide binding |
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
IEA |
|
MF |
GO:0003690 |
double-stranded DNA binding |
Interacting selectively and non-covalently with double-stranded DNA. |
TAS |
|
MF |
GO:0003723 |
RNA binding |
Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
TAS |
|
MF |
GO:0008270 |
zinc ion binding |
Interacting selectively and non-covalently with zinc (Zn) ions. |
IEA |
|
MF |
GO:0044822 |
poly(A) RNA binding |
Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases. |
IDA |
| Domain ID | Description |
|---|---|
|
IPR000504 |
RNA recognition motif domain |
|
IPR000690 |
Matrin/U1-C, C2H2-type zinc finger |
|
IPR003604 |
Matrin/U1-C-like, C2H2-type zinc finger |
|
IPR013087 |
Zinc finger C2H2-type |
|
IPR022755 |
Zinc finger, double-stranded RNA binding |
|
IPR033096 |
Zinc finger protein 638 |
| Tissue | Cell Type |
|---|---|
|
breast |
glandular cells |
|
breast |
myoepithelial cells |
|
bronchus |
respiratory epithelial cells |
|
caudate |
neuronal cells |
|
cerebellum |
cells in granular layer |
|
cerebellum |
cells in molecular layer |
|
cerebellum |
Purkinje cells |
|
cerebral cortex |
glial cells |
|
cerebral cortex |
neuronal cells |
|
colon |
glandular cells |
|
colon |
peripheral nerve/ganglion |
|
duodenum |
glandular cells |
|
gallbladder |
glandular cells |
|
kidney |
cells in tubules |
|
nasopharynx |
respiratory epithelial cells |
|
placenta |
decidual cells |
|
rectum |
glandular cells |
|
small intestine |
glandular cells |
|
testis |
cells in seminiferous ducts |
|
tonsil |
squamous epithelial cells |
|
urinary bladder |
urothelial cells |
| Pubmed ID | Author | Year | Title |
|---|---|---|---|
|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
| Gene Symbol | Entrez ID | Uniprot ID | Score |
|---|---|---|---|
|
ZNF24 |
7572 |
P17028 |
0.49 |
|
SF3A3 |
10946 |
Q12874 |
0.49 |
|
NELFCD |
51497 |
Q8IXH7 |
0.63 |
|
CCDC85B |
11007 |
Q15834 |
0.73 |
|
KIF1BP |
26128 |
Q96EK5 |
0.73 |
|
KRTAP4-12 |
83755 |
Q9BQ66 |
0.73 |
|
FHL2 |
2274 |
Q14192 |
0.78 |
|
GTF2F2 |
2963 |
P13984 |
0.49 |
|
PURA |
5813 |
Q00577 |
0.49 |
|
YY1 |
7528 |
P25490 |
0.49 |
|
WASL |
8976 |
O00401 |
0.49 |
|
ESR2 |
2100 |
Q92731 |
0.55 |
|
SUMO1 |
7341 |
P63165 |
0.56 |
|
BMI1 |
648 |
P35226 |
0.63 |
|
CDC5L |
988 |
Q99459 |
0.63 |
|
ELAVL1 |
1994 |
Q15717 |
0.63 |
|
EZH2 |
2146 |
Q15910 |
0.63 |
|
IFI16 |
3428 |
Q16666 |
0.63 |
|
JUN |
3725 |
P05412 |
0.63 |
|
KRT15 |
3866 |
P19012 |
0.63 |
|
KRT19 |
3880 |
P08727 |
0.63 |
|
RNF2 |
6045 |
Q99496 |
0.63 |
|
RPA1 |
6117 |
P27694 |
0.63 |
|
RPA2 |
6118 |
P15927 |
0.63 |
|
RPA3 |
6119 |
P35244 |
0.63 |
|
SPP1 |
6696 |
P10451 |
0.63 |
|
YWHAG |
7532 |
P61981 |
0.63 |
|
EED |
8726 |
O75530 |
0.63 |
|
CUL7 |
9820 |
Q14999 |
0.63 |
|
CALCOCO2 |
10241 |
Q13137 |
0.63 |
|
SRRM1 |
10250 |
Q8IYB3 |
0.63 |
|
GABARAPL2 |
11345 |
P60520 |
0.63 |
|
SNW1 |
22938 |
Q13573 |
0.63 |
|
PASK |
23178 |
Q96RG2 |
0.63 |
|
OBSL1 |
23363 |
O75147 |
0.63 |
|
MED4 |
29079 |
Q9NPJ6 |
0.63 |
|
HOOK2 |
29911 |
Q96ED9 |
0.63 |
|
SIRT7 |
51547 |
Q9NRC8 |
0.63 |
|
LGR4 |
55366 |
Q9BXB1 |
0.63 |
|
LUC7L |
55692 |
Q9NQ29 |
0.63 |
|
CAND1 |
55832 |
Q86VP6 |
0.63 |
|
HECW2 |
57520 |
Q9P2P5 |
0.63 |
|
MAP1LC3A |
84557 |
Q9H492 |
0.63 |
|
HNRNPA1 |
3178 |
P09651 |
0.72 |
|
PPP1CB |
5500 |
P62140 |
0.72 |
|
PPP1CC |
5501 |
P36873 |
0.72 |
|
MATR3 |
9782 |
P43243 |
0.72 |
|
MPHOSPH8 |
54737 |
Q99549 |
0.72 |
|
PLSCR1 |
5359 |
O15162 |
0.73 |
|
WWP1 |
11059 |
Q9H0M0 |
0.73 |
|
EFEMP2 |
30008 |
O95967 |
0.73 |
|
SFN |
2810 |
P31947 |
0.76 |