| Gene Symbol | LSM14A |
| Entrez ID | 26065 |
| Uniprot ID | Q8ND56 |
| Description | LSM14A mRNA processing body assembly factor |
| Chromosomal Location | chr19: 34,172,504-34,229,515 |
| Ontology | GO ID | GO Term | Definition | Evidence |
|---|---|---|---|---|
BP | GO:0006417 | regulation of translation |
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA. | IEA |
BP | GO:0007275 | multicellular organism development |
The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). | IEA |
BP | GO:0033962 | cytoplasmic mRNA processing body assembly |
The aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic mRNA processing body. | IDA|IMP |
BP | GO:0039529 | RIG-I signaling pathway |
Any series of molecular signals generated as a consequence of the cytoplasmic pattern recognition receptor (PRR) RIG-1 (also known as DDX58) binding to viral RNA. RIG-I detects RNA synthesized during active viral replication and triggers a signaling pathway to protect the host against viral infection, for example by inducing the expression of antiviral cytokines. | IEA |
BP | GO:0060340 | positive regulation of type I interferon-mediated signaling pathway |
Any process that increases the rate, frequency or extent of a type I interferon-mediated signaling pathway. A type I interferon-mediated signaling pathway is the series of molecular events generated as a consequence of a type I interferon binding to a cell surface receptor. | IEA |
CC | GO:0000932 | cytoplasmic mRNA processing body |
A focus in the cytoplasm where mRNAs may become inactivated by decapping or some other mechanism. mRNA processing and binding proteins are localized to these foci. | IDA |
CC | GO:0005737 | cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | IDA |
CC | GO:0010494 | cytoplasmic stress granule |
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress. | IDA |
CC | GO:0043231 | intracellular membrane-bounded organelle |
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. | IDA |
MF | GO:0003690 | double-stranded DNA binding |
Interacting selectively and non-covalently with double-stranded DNA. | IEA |
MF | GO:0003725 | double-stranded RNA binding |
Interacting selectively and non-covalently with double-stranded RNA. | IEA |
MF | GO:0003727 | single-stranded RNA binding |
Interacting selectively and non-covalently with single-stranded RNA. | IEA |
MF | GO:0044822 | poly(A) RNA binding |
Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases. | IDA |
| Domain ID | Description |
|---|---|
IPR010920 | LSM domain |
IPR019050 | FDF domain |
IPR025609 | Lsm14-like, N-terminal |
IPR025761 | FFD box |
IPR025762 | DFDF domain |
IPR025768 | TFG box |
| Tissue | Cell Type |
|---|---|
appendix | glandular cells |
appendix | lymphoid tissue |
breast | glandular cells |
bronchus | respiratory epithelial cells |
cervix, uterine | squamous epithelial cells |
colon | glandular cells |
duodenum | glandular cells |
esophagus | squamous epithelial cells |
fallopian tube | glandular cells |
gallbladder | glandular cells |
nasopharynx | respiratory epithelial cells |
oral mucosa | squamous epithelial cells |
rectum | glandular cells |
skin | keratinocytes |
skin | melanocytes |
skin | epidermal cells |
small intestine | glandular cells |
testis | cells in seminiferous ducts |
thyroid gland | glandular cells |
tonsil | germinal center cells |
tonsil | squamous epithelial cells |
urinary bladder | urothelial cells |
| Pubmed ID | Author | Year | Title |
|---|---|---|---|
22951915 | Haozi et al. | 2012 | Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
| Gene Symbol | Entrez ID | Uniprot ID | Score |
|---|---|---|---|
FLNC | 2318 | Q14315 | 0.63 |
CIRBP | 1153 | Q14011 | 0.49 |
DDX1 | 1653 | Q92499 | 0.49 |
HNRNPH1 | 3187 | P31943 | 0.49 |
HNRNPL | 3191 | P14866 | 0.49 |
HNRNPU | 3192 | Q00839 | 0.49 |
HNRNPDL | 9987 | O14979 | 0.49 |
SYNCRIP | 10492 | O60506 | 0.49 |
ELAVL1 | 1994 | Q15717 | 0.63 |
NTRK1 | 4914 | P04629 | 0.63 |
TP53 | 7157 | P04637 | 0.63 |
XPO1 | 7514 | O14980 | 0.63 |
RAE1 | 8480 | P78406 | 0.63 |
PTBP3 | 9991 | O95758 | 0.63 |
AHSA1 | 10598 | O95433 | 0.63 |
PRMT8 | 56341 | Q9NR22 | 0.63 |
HECW2 | 57520 | Q9P2P5 | 0.63 |
CSNK2A1 | 1457 | P68400 | 0.7 |
SORT1 | 6272 | Q99523 | 0.72 |