Gene Symbol | LSM14A |
Entrez ID | 26065 |
Uniprot ID | Q8ND56 |
Description | LSM14A mRNA processing body assembly factor |
Chromosomal Location | chr19: 34,172,504-34,229,515 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006417 |
regulation of translation |
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA. |
IEA |
BP |
GO:0007275 |
multicellular organism development |
The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). |
IEA |
BP |
GO:0033962 |
cytoplasmic mRNA processing body assembly |
The aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic mRNA processing body. |
IDA|IMP |
BP |
GO:0039529 |
RIG-I signaling pathway |
Any series of molecular signals generated as a consequence of the cytoplasmic pattern recognition receptor (PRR) RIG-1 (also known as DDX58) binding to viral RNA. RIG-I detects RNA synthesized during active viral replication and triggers a signaling pathway to protect the host against viral infection, for example by inducing the expression of antiviral cytokines. |
IEA |
BP |
GO:0060340 |
positive regulation of type I interferon-mediated signaling pathway |
Any process that increases the rate, frequency or extent of a type I interferon-mediated signaling pathway. A type I interferon-mediated signaling pathway is the series of molecular events generated as a consequence of a type I interferon binding to a cell surface receptor. |
IEA |
CC |
GO:0000932 |
cytoplasmic mRNA processing body |
A focus in the cytoplasm where mRNAs may become inactivated by decapping or some other mechanism. mRNA processing and binding proteins are localized to these foci. |
IDA |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
CC |
GO:0010494 |
cytoplasmic stress granule |
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress. |
IDA |
CC |
GO:0043231 |
intracellular membrane-bounded organelle |
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
IDA |
MF |
GO:0003690 |
double-stranded DNA binding |
Interacting selectively and non-covalently with double-stranded DNA. |
IEA |
MF |
GO:0003725 |
double-stranded RNA binding |
Interacting selectively and non-covalently with double-stranded RNA. |
IEA |
MF |
GO:0003727 |
single-stranded RNA binding |
Interacting selectively and non-covalently with single-stranded RNA. |
IEA |
MF |
GO:0044822 |
poly(A) RNA binding |
Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases. |
IDA |
Domain ID | Description |
---|---|
IPR010920 |
LSM domain |
IPR019050 |
FDF domain |
IPR025609 |
Lsm14-like, N-terminal |
IPR025761 |
FFD box |
IPR025762 |
DFDF domain |
IPR025768 |
TFG box |
Tissue | Cell Type |
---|---|
appendix |
glandular cells |
appendix |
lymphoid tissue |
breast |
glandular cells |
bronchus |
respiratory epithelial cells |
cervix, uterine |
squamous epithelial cells |
colon |
glandular cells |
duodenum |
glandular cells |
esophagus |
squamous epithelial cells |
fallopian tube |
glandular cells |
gallbladder |
glandular cells |
nasopharynx |
respiratory epithelial cells |
oral mucosa |
squamous epithelial cells |
rectum |
glandular cells |
skin |
keratinocytes |
skin |
melanocytes |
skin |
epidermal cells |
small intestine |
glandular cells |
testis |
cells in seminiferous ducts |
thyroid gland |
glandular cells |
tonsil |
germinal center cells |
tonsil |
squamous epithelial cells |
urinary bladder |
urothelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
FLNC |
2318 |
Q14315 |
0.63 |
CIRBP |
1153 |
Q14011 |
0.49 |
DDX1 |
1653 |
Q92499 |
0.49 |
HNRNPH1 |
3187 |
P31943 |
0.49 |
HNRNPL |
3191 |
P14866 |
0.49 |
HNRNPU |
3192 |
Q00839 |
0.49 |
HNRNPDL |
9987 |
O14979 |
0.49 |
SYNCRIP |
10492 |
O60506 |
0.49 |
ELAVL1 |
1994 |
Q15717 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
TP53 |
7157 |
P04637 |
0.63 |
XPO1 |
7514 |
O14980 |
0.63 |
RAE1 |
8480 |
P78406 |
0.63 |
PTBP3 |
9991 |
O95758 |
0.63 |
AHSA1 |
10598 |
O95433 |
0.63 |
PRMT8 |
56341 |
Q9NR22 |
0.63 |
HECW2 |
57520 |
Q9P2P5 |
0.63 |
CSNK2A1 |
1457 |
P68400 |
0.70 |
SORT1 |
6272 |
Q99523 |
0.72 |