Gene Symbol | PDS5B |
Entrez ID | 23047 |
Uniprot ID | Q9NTI5 |
Description | PDS5 cohesin associated factor B |
Chromosomal Location | chr13: 32,586,427-32,778,019 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006281 |
DNA repair |
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. |
IBA |
BP |
GO:0007062 |
sister chromatid cohesion |
The cell cycle process in which the sister chromatids of a replicated chromosome become tethered to each other. |
TAS |
BP |
GO:0007064 |
mitotic sister chromatid cohesion |
The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission. |
IMP |
BP |
GO:0008283 |
cell proliferation |
The multiplication or reproduction of cells, resulting in the expansion of a cell population. |
TAS |
BP |
GO:0008285 |
negative regulation of cell proliferation |
Any process that stops, prevents or reduces the rate or extent of cell proliferation. |
IDA |
BP |
GO:0042127 |
regulation of cell proliferation |
Any process that modulates the frequency, rate or extent of cell proliferation. |
IDA |
BP |
GO:0051301 |
cell division |
The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. |
IEA |
CC |
GO:0000775 |
chromosome, centromeric region |
The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome. |
TAS |
CC |
GO:0000785 |
chromatin |
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome. |
IDA |
CC |
GO:0005634 |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
ISS |
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
IDA|TAS |
CC |
GO:0005694 |
chromosome |
A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. |
TAS |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
TAS |
MF |
GO:0003677 |
DNA binding |
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
TAS |
MF |
GO:0005515 |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IPI |
MF |
GO:0005524 |
ATP binding |
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
TAS |
Domain ID | Description |
---|---|
IPR011989 |
Armadillo-like helical |
IPR016024 |
Armadillo-type fold |
Tissue | Cell Type |
---|---|
adrenal gland |
glandular cells |
bone marrow |
hematopoietic cells |
breast |
adipocytes |
breast |
glandular cells |
breast |
myoepithelial cells |
bronchus |
respiratory epithelial cells |
caudate |
glial cells |
cerebellum |
cells in granular layer |
cerebellum |
cells in molecular layer |
cerebellum |
Purkinje cells |
cerebral cortex |
endothelial cells |
cerebral cortex |
glial cells |
cerebral cortex |
neuronal cells |
cerebral cortex |
neuropil |
cervix, uterine |
glandular cells |
cervix, uterine |
squamous epithelial cells |
colon |
endothelial cells |
duodenum |
glandular cells |
endometrium |
cells in endometrial stroma |
epididymis |
glandular cells |
esophagus |
squamous epithelial cells |
fallopian tube |
glandular cells |
gallbladder |
glandular cells |
hippocampus |
glial cells |
kidney |
cells in glomeruli |
kidney |
cells in tubules |
lung |
pneumocytes |
lymph node |
non-germinal center cells |
ovary |
follicle cells |
placenta |
trophoblastic cells |
prostate |
glandular cells |
rectum |
glandular cells |
salivary gland |
glandular cells |
skeletal muscle |
myocytes |
skin |
fibroblasts |
skin |
keratinocytes |
skin |
Langerhans |
skin |
melanocytes |
skin |
epidermal cells |
smooth muscle |
smooth muscle cells |
soft tissue |
fibroblasts |
soft tissue |
chondrocytes |
spleen |
cells in red pulp |
stomach |
glandular cells |
testis |
cells in seminiferous ducts |
thyroid gland |
glandular cells |
tonsil |
non-germinal center cells |
tonsil |
squamous epithelial cells |
urinary bladder |
urothelial cells |
vagina |
squamous epithelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
15308691 |
Jansen et al. |
2004 |
Abnormal Gene Expression Profiles in Human Ovaries from Polycystic Ovary Syndrome Patients |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
APP |
351 |
P05067 |
0.56 |
PDS5B |
23047 |
Q9NTI5 |
0.63 |
PCNA |
5111 |
P12004 |
0.72 |
RAD51 |
5888 |
Q06609 |
0.72 |
CDC45 |
8318 |
O75419 |
0.72 |
PALB2 |
79728 |
Q86YC2 |
0.72 |
WFDC5 |
149708 |
Q8TCV5 |
0.73 |
RAD21 |
5885 |
O60216 |
0.87 |
SMC1A |
8243 |
Q14683 |
0.87 |
LAMP2 |
3920 |
P13473 |
0.49 |
CEP164 |
22897 |
Q9UPV0 |
0.49 |
NSMCE2 |
286053 |
Q96MF7 |
0.49 |
SUMO1 |
7341 |
P63165 |
0.56 |
BSG |
682 |
P35613 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
RNF2 |
6045 |
Q99496 |
0.63 |
SCN2B |
6327 |
O60939 |
0.63 |
SLC30A4 |
7782 |
O14863 |
0.63 |
EED |
8726 |
O75530 |
0.63 |
TGOLN2 |
10618 |
O43493 |
0.63 |
OBSL1 |
23363 |
O75147 |
0.63 |
LYPD3 |
27076 |
O95274 |
0.63 |
CD274 |
29126 |
Q9NZQ7 |
0.63 |
SIRT7 |
51547 |
Q9NRC8 |
0.63 |
SEPT12 |
124404 |
Q8IYM1 |
0.63 |
PDS5A |
23244 |
Q29RF7 |
0.73 |
BRCA2 |
675 |
P51587 |
0.78 |
MYC |
4609 |
P01106 |
0.82 |
STAG2 |
10735 |
Q8N3U4 |
0.82 |
STAG1 |
10274 |
Q8WVM7 |
0.83 |
SMC3 |
9126 |
Q9UQE7 |
0.87 |
CDCA5 |
113130 |
Q96FF9 |
0.88 |
WAPL |
23063 |
Q7Z5K2 |
0.89 |