Protein Description

Gene Symbol PDS5B
Entrez ID 23047
Uniprot ID Q9NTI5
Description PDS5 cohesin associated factor B
Chromosomal Location chr13: 32,586,427-32,778,019
Ontology GO ID GO Term Definition Evidence

BP

GO:0006281

DNA repair

The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.

IBA

BP

GO:0007062

sister chromatid cohesion

The cell cycle process in which the sister chromatids of a replicated chromosome become tethered to each other.

TAS

BP

GO:0007064

mitotic sister chromatid cohesion

The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission.

IMP

BP

GO:0008283

cell proliferation

The multiplication or reproduction of cells, resulting in the expansion of a cell population.

TAS

BP

GO:0008285

negative regulation of cell proliferation

Any process that stops, prevents or reduces the rate or extent of cell proliferation.

IDA

BP

GO:0042127

regulation of cell proliferation

Any process that modulates the frequency, rate or extent of cell proliferation.

IDA

BP

GO:0051301

cell division

The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.

IEA

CC

GO:0000775

chromosome, centromeric region

The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.

TAS

CC

GO:0000785

chromatin

The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.

IDA

CC

GO:0005634

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

ISS

CC

GO:0005654

nucleoplasm

That part of the nuclear content other than the chromosomes or the nucleolus.

IDA|TAS

CC

GO:0005694

chromosome

A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.

TAS

CC

GO:0005829

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

TAS

MF

GO:0003677

DNA binding

Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

TAS

MF

GO:0005515

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

IPI

MF

GO:0005524

ATP binding

Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

TAS

Domain ID Description

IPR011989

Armadillo-like helical

IPR016024

Armadillo-type fold

No pathways found.

No diseases found.

Tissue Cell Type

adrenal gland

glandular cells

bone marrow

hematopoietic cells

breast

adipocytes

breast

glandular cells

breast

myoepithelial cells

bronchus

respiratory epithelial cells

caudate

glial cells

cerebellum

cells in granular layer

cerebellum

cells in molecular layer

cerebellum

Purkinje cells

cerebral cortex

endothelial cells

cerebral cortex

glial cells

cerebral cortex

neuronal cells

cerebral cortex

neuropil

cervix, uterine

glandular cells

cervix, uterine

squamous epithelial cells

colon

endothelial cells

duodenum

glandular cells

endometrium

cells in endometrial stroma

epididymis

glandular cells

esophagus

squamous epithelial cells

fallopian tube

glandular cells

gallbladder

glandular cells

hippocampus

glial cells

kidney

cells in glomeruli

kidney

cells in tubules

lung

pneumocytes

lymph node

non-germinal center cells

ovary

follicle cells

placenta

trophoblastic cells

prostate

glandular cells

rectum

glandular cells

salivary gland

glandular cells

skeletal muscle

myocytes

skin

fibroblasts

skin

keratinocytes

skin

Langerhans

skin

melanocytes

skin

epidermal cells

smooth muscle

smooth muscle cells

soft tissue

fibroblasts

soft tissue

chondrocytes

spleen

cells in red pulp

stomach

glandular cells

testis

cells in seminiferous ducts

thyroid gland

glandular cells

tonsil

non-germinal center cells

tonsil

squamous epithelial cells

urinary bladder

urothelial cells

vagina

squamous epithelial cells

No databases found.

Pubmed ID Author Year Title

15308691

Jansen et al.

2004

Abnormal Gene Expression Profiles in Human Ovaries from Polycystic Ovary Syndrome Patients

Gene Symbol Entrez ID Uniprot ID Score

APP

351

P05067

0.56

PDS5B

23047

Q9NTI5

0.63

PCNA

5111

P12004

0.72

RAD51

5888

Q06609

0.72

CDC45

8318

O75419

0.72

PALB2

79728

Q86YC2

0.72

WFDC5

149708

Q8TCV5

0.73

RAD21

5885

O60216

0.87

SMC1A

8243

Q14683

0.87

LAMP2

3920

P13473

0.49

CEP164

22897

Q9UPV0

0.49

NSMCE2

286053

Q96MF7

0.49

SUMO1

7341

P63165

0.56

BSG

682

P35613

0.63

NTRK1

4914

P04629

0.63

RNF2

6045

Q99496

0.63

SCN2B

6327

O60939

0.63

SLC30A4

7782

O14863

0.63

EED

8726

O75530

0.63

TGOLN2

10618

O43493

0.63

OBSL1

23363

O75147

0.63

LYPD3

27076

O95274

0.63

CD274

29126

Q9NZQ7

0.63

SIRT7

51547

Q9NRC8

0.63

SEPT12

124404

Q8IYM1

0.63

PDS5A

23244

Q29RF7

0.73

BRCA2

675

P51587

0.78

MYC

4609

P01106

0.82

STAG2

10735

Q8N3U4

0.82

STAG1

10274

Q8WVM7

0.83

SMC3

9126

Q9UQE7

0.87

CDCA5

113130

Q96FF9

0.88

WAPL

23063

Q7Z5K2

0.89