Gene Symbol | GCN1 |
Entrez ID | 10985 |
Uniprot ID | Q92616 |
Description | GCN1, eIF2 alpha kinase activator homolog |
Chromosomal Location | chr12: 120,127,203-120,194,710 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006412 |
translation |
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
IEA |
BP |
GO:0006417 |
regulation of translation |
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA. |
IEA |
BP |
GO:0033674 |
positive regulation of kinase activity |
Any process that activates or increases the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
IEA |
BP |
GO:0034198 |
cellular response to amino acid starvation |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of amino acids. |
ISS |
BP |
GO:0036003 |
positive regulation of transcription from RNA polymerase II promoter in response to stress |
Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation). |
ISS |
BP |
GO:0045859 |
regulation of protein kinase activity |
Any process that modulates the frequency, rate or extent of protein kinase activity. |
IEA |
BP |
GO:0098609 |
cell-cell adhesion |
The attachment of one cell to another cell via adhesion molecules. |
IEA |
BP |
GO:1990253 |
cellular response to leucine starvation |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of leucine. |
ISS |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA|NAS |
CC |
GO:0005840 |
ribosome |
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. |
NAS |
CC |
GO:0005844 |
polysome |
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro. |
ISS |
CC |
GO:0005913 |
cell-cell adherens junction |
An adherens junction which connects a cell to another cell. |
IDA |
CC |
GO:0016020 |
membrane |
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
IDA |
MF |
GO:0008135 |
translation factor activity, RNA binding |
Functions during translation by interacting selectively and non-covalently with RNA during polypeptide synthesis at the ribosome. |
NAS |
MF |
GO:0019887 |
protein kinase regulator activity |
Modulates the activity of a protein kinase, an enzyme which phosphorylates a protein. |
IEA |
MF |
GO:0019901 |
protein kinase binding |
Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate. |
IEA |
MF |
GO:0043022 |
ribosome binding |
Interacting selectively and non-covalently with any part of a ribosome. |
IEA |
MF |
GO:0044822 |
poly(A) RNA binding |
Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases. |
IDA |
MF |
GO:0098641 |
cadherin binding involved in cell-cell adhesion |
Any cadherin binding that occurs as part of the process of cell-cell adhesion. |
IDA |
Domain ID | Description |
---|---|
IPR011989 |
Armadillo-like helical |
IPR016024 |
Armadillo-type fold |
IPR021133 |
HEAT, type 2 |
IPR033173 |
Translational activator Gcn1 |
IPR034085 |
TOG domain |
Tissue | Cell Type |
---|---|
appendix |
glandular cells |
cerebral cortex |
neuronal cells |
colon |
glandular cells |
duodenum |
glandular cells |
epididymis |
glandular cells |
gallbladder |
glandular cells |
kidney |
cells in tubules |
pancreas |
exocrine glandular cells |
placenta |
decidual cells |
placenta |
trophoblastic cells |
rectum |
glandular cells |
small intestine |
glandular cells |
stomach |
glandular cells |
urinary bladder |
urothelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
ACAT1 |
38 |
P24752 |
0.49 |
COPA |
1314 |
P53621 |
0.49 |
DNMT1 |
1786 |
P26358 |
0.49 |
EIF2D |
1939 |
P41214 |
0.49 |
HELLS |
3070 |
Q9NRZ9 |
0.49 |
HNRNPL |
3191 |
P14866 |
0.49 |
HSPA1A |
3303 |
P0DMV8 |
0.49 |
HSPA1B |
3304 |
P0DMV9 |
0.49 |
NDUFA5 |
4698 |
Q16718 |
0.49 |
SAFB |
6294 |
Q15424 |
0.49 |
SRSF1 |
6426 |
Q07955 |
0.49 |
SRSF3 |
6428 |
P84103 |
0.49 |
TRA2B |
6434 |
P62995 |
0.49 |
SNRNP70 |
6625 |
P08621 |
0.49 |
PDCD6 |
10016 |
O75340 |
0.49 |
PGRMC1 |
10857 |
O00264 |
0.49 |
INF2 |
64423 |
Q27J81 |
0.49 |
HNRNPA3 |
220988 |
P51991 |
0.49 |
CSH1|CSH2 |
1442 |
P0DML2|P0DML3 |
0.63 |
EPB41L1 |
2036 |
Q9H4G0 |
0.63 |
RPL5 |
6125 |
P46777 |
0.63 |
RPS2 |
6187 |
P15880 |
0.63 |
EIF2S2 |
8894 |
P20042 |
0.63 |
SLC4A10 |
57282 |
Q6U841 |
0.63 |
LZTS2 |
84445 |
Q9BRK4 |
0.63 |
ANXA5 |
308 |
P08758 |
0.49 |
HARS |
3035 |
P12081 |
0.49 |
SDHA |
6389 |
P31040 |
0.49 |
COPG1 |
22820 |
Q9Y678 |
0.49 |
CCNC |
892 |
P24863 |
0.52 |
BMI1 |
648 |
P35226 |
0.63 |
BSG |
682 |
P35613 |
0.63 |
CDK2 |
1017 |
P24941 |
0.63 |
CRY2 |
1408 |
Q49AN0 |
0.63 |
EGFR |
1956 |
P00533 |
0.63 |
FN1 |
2335 |
P02751 |
0.63 |
HIVEP2 |
3097 |
P31629 |
0.63 |
ITGA4 |
3676 |
P13612 |
0.63 |
JUN |
3725 |
P05412 |
0.63 |
SMAD1 |
4086 |
Q15797 |
0.63 |
MCAM |
4162 |
P43121 |
0.63 |
MCM2 |
4171 |
P49736 |
0.63 |
NEDD8 |
4738 |
Q15843 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
PRKAB2 |
5565 |
O43741 |
0.63 |
PSMB8 |
5696 |
P28062 |
0.63 |
RNF2 |
6045 |
Q99496 |
0.63 |
SCN2B |
6327 |
O60939 |
0.63 |
SUMO2 |
6613 |
P61956 |
0.63 |
SOX2 |
6657 |
P48431 |
0.63 |
SREBF1 |
6720 |
P36956 |
0.63 |
STAU1 |
6780 |
O95793 |
0.63 |
TRAF6 |
7189 |
Q9Y4K3 |
0.63 |
SUMO1 |
7341 |
P63165 |
0.63 |
MLF2 |
8079 |
Q15773 |
0.63 |
ZMYM4 |
9202 |
Q5VZL5 |
0.63 |
CUL7 |
9820 |
Q14999 |
0.63 |
CEP170 |
9859 |
Q5SW79 |
0.63 |
PTBP3 |
9991 |
O95758 |
0.63 |
HDAC5 |
10014 |
Q9UQL6 |
0.63 |
UBD |
10537 |
O15205 |
0.63 |
FAF2 |
23197 |
Q96CS3 |
0.63 |
OBSL1 |
23363 |
O75147 |
0.63 |
SUZ12 |
23512 |
Q15022 |
0.63 |
FBXO6 |
26270 |
Q9NRD1 |
0.63 |
AGO2 |
27161 |
Q9UKV8 |
0.63 |
CD274 |
29126 |
Q9NZQ7 |
0.63 |
SIRT7 |
51547 |
Q9NRC8 |
0.63 |
MED9 |
55090 |
Q9NWA0 |
0.63 |
LGR4 |
55366 |
Q9BXB1 |
0.63 |
MED29 |
55588 |
Q9NX70 |
0.63 |
ARAP3 |
64411 |
Q8WWN8 |
0.63 |
TTMP |
79669 |
Q5BVD1 |
0.63 |
CCDC8 |
83987 |
Q9H0W5 |
0.63 |
ASB5 |
140458 |
Q8WWX0 |
0.63 |
MED19 |
219541 |
A0JLT2 |
0.63 |
PHACTR1 |
221692 |
Q9C0D0 |
0.63 |
UBAC2 |
337867 |
Q8NBM4 |
0.63 |
C4orf3 |
401152 |
Q8WVX3 |
0.63 |
YWHAZ |
7534 |
P63104 |
0.68 |
YWHAQ |
10971 |
P27348 |
0.68 |
ALB |
213 |
P02768 |
0.72 |
ERCC3 |
2071 |
P19447 |
0.72 |
GTF2A1 |
2957 |
P52655 |
0.72 |
MAGEA6 |
4105 |
P43360 |
0.72 |
NCBP1 |
4686 |
Q09161 |
0.72 |
PHKG2 |
5261 |
P15735 |
0.72 |
RELA |
5970 |
Q04206 |
0.72 |
TNFRSF1A |
7132 |
P19438 |
0.72 |
TNFRSF1B |
7133 |
P20333 |
0.72 |
TUBG1 |
7283 |
P23258 |
0.72 |
XRCC3 |
7517 |
O43542 |
0.72 |
IKBKG |
8517 |
Q9Y6K9 |
0.72 |
TNFRSF14 |
8764 |
Q92956 |
0.72 |
NEK6 |
10783 |
Q9HC98 |
0.72 |
WIPI2 |
26100 |
Q9Y4P8 |
0.72 |
HDAC11 |
79885 |
Q96DB2 |
0.72 |
TUBA1C |
84790 |
Q9BQE3 |
0.72 |
ARMC6 |
93436 |
Q6NXE6 |
0.72 |
ESR1 |
2099 |
P03372 |
0.73 |
SNW1 |
22938 |
Q13573 |
0.73 |
CASP4 |
837 |
P49662 |
0.76 |
TSC22D1 |
8848 |
Q15714 |
0.76 |
MAGED1 |
9500 |
Q9Y5V3 |
0.76 |
USP19 |
10869 |
O94966 |
0.76 |
PTP4A3 |
11156 |
O75365 |
0.76 |
MAST2 |
23139 |
Q6P0Q8 |
0.76 |
BRF2 |
55290 |
Q9HAW0 |
0.76 |
C20orf24 |
55969 |
Q9BUV8 |
0.76 |
CAMKK2 |
10645 |
Q96RR4 |
0.79 |
CLN3 |
1201 |
Q13286 |
0.82 |
VCAM1 |
7412 |
P19320 |
0.82 |
ILK |
3611 |
Q13418 |
0.86 |
CDC5L |
988 |
Q99459 |
0.87 |
MYC |
4609 |
P01106 |
0.89 |