Gene Symbol | PAPOLA |
Entrez ID | 10914 |
Uniprot ID | P51003 |
Description | poly(A) polymerase alpha |
Chromosomal Location | chr14: 96,501,433-96,567,111 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0000398 |
mRNA splicing, via spliceosome |
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. |
TAS |
BP |
GO:0006369 |
termination of RNA polymerase II transcription |
The process in which the synthesis of an RNA molecule by RNA polymerase II using a DNA template is completed. |
TAS |
BP |
GO:0006378 |
mRNA polyadenylation |
The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript. |
IDA |
BP |
GO:0031124 |
mRNA 3'-end processing |
Any process involved in forming the mature 3' end of an mRNA molecule. |
TAS |
BP |
GO:0031440 |
regulation of mRNA 3'-end processing |
Any process that modulates the frequency, rate or extent of mRNA 3'-end processing, any process involved in forming the mature 3' end of an mRNA molecule. |
IDA |
BP |
GO:0043631 |
RNA polyadenylation |
The enzymatic addition of a sequence of adenylyl residues at the 3' end of an RNA molecule. |
ISS |
CC |
GO:0005634 |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
TAS |
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
IDA|TAS |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
TAS |
MF |
GO:0000287 |
magnesium ion binding |
Interacting selectively and non-covalently with magnesium (Mg) ions. |
ISS |
MF |
GO:0003723 |
RNA binding |
Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
IEA |
MF |
GO:0004652 |
polynucleotide adenylyltransferase activity |
Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group. |
IDA|ISS|TAS |
MF |
GO:0005515 |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IPI |
MF |
GO:0005524 |
ATP binding |
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
ISS |
MF |
GO:0030145 |
manganese ion binding |
Interacting selectively and non-covalently with manganese (Mn) ions. |
ISS |
Domain ID | Description |
---|---|
IPR002934 |
Polymerase, nucleotidyl transferase domain |
IPR007010 |
Poly(A) polymerase, RNA-binding domain |
IPR007012 |
Poly(A) polymerase, central domain |
IPR011068 |
Nucleotidyltransferase, class I, C-terminal-like |
IPR014492 |
Poly(A) polymerase |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa03015 |
mRNA surveillance pathway |
KEGG |
WP411 |
mRNA Processing |
WikiPathways |
h_cpsfPathway |
Polyadenylation of mRNA |
BioCarta |
Tissue | Cell Type |
---|---|
colon |
peripheral nerve/ganglion |
epididymis |
glandular cells |
nasopharynx |
respiratory epithelial cells |
pancreas |
exocrine glandular cells |
skin |
melanocytes |
urinary bladder |
urothelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
ADRBK1 |
156 |
P25098 |
0.49 |
HNRNPA1 |
3178 |
P09651 |
0.49 |
CSTF2T |
23283 |
Q9H0L4 |
0.49 |
CSTF2 |
1478 |
P33240 |
0.56 |
CSTF3 |
1479 |
Q12996 |
0.56 |
PPP1CB |
5500 |
P62140 |
0.56 |
SUPT5H |
6829 |
O00267 |
0.56 |
CPSF3 |
51692 |
Q9UKF6 |
0.61 |
SNRPA |
6626 |
P09012 |
0.62 |
GNA11 |
2767 |
P29992 |
0.63 |
HDAC1 |
3065 |
Q13547 |
0.63 |
HDAC3 |
8841 |
O15379 |
0.63 |
NUDT21 |
11051 |
O43809 |
0.63 |
CPSF6 |
11052 |
Q16630 |
0.63 |
SIRT2 |
22933 |
Q8IXJ6 |
0.63 |
SIRT1 |
23411 |
Q96EB6 |
0.63 |
RSRC1 |
51319 |
Q96IZ7 |
0.63 |
HDAC10 |
83933 |
Q969S8 |
0.63 |
KPNB1 |
3837 |
Q14974 |
0.70 |
CIRBP |
1153 |
Q14011 |
0.72 |
YWHAE |
7531 |
P62258 |
0.74 |
LMNA |
4000 |
P02545 |
0.49 |
MTHFD1 |
4522 |
P11586 |
0.49 |
PABPC3 |
5042 |
Q9H361 |
0.49 |
SARS |
6301 |
P49591 |
0.49 |
PICALM |
8301 |
Q13492 |
0.49 |
PROSC |
11212 |
O94903 |
0.49 |
MTHFD1L |
25902 |
Q6UB35 |
0.49 |
UFD1L |
7353 |
Q92890 |
0.56 |
RRAGA |
10670 |
Q7L523 |
0.56 |
PABPC1 |
26986 |
P11940 |
0.56 |
CPSF2 |
53981 |
Q9P2I0 |
0.56 |
WDR33 |
55339 |
Q9C0J8 |
0.56 |
FIP1L1 |
81608 |
Q6UN15 |
0.56 |
CREBBP |
1387 |
Q92793 |
0.63 |
ELAVL1 |
1994 |
Q15717 |
0.63 |
SMAD2 |
4087 |
Q15796 |
0.63 |
NARS |
4677 |
O43776 |
0.63 |
NPM1 |
4869 |
P06748 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
PCBP2 |
5094 |
Q15366 |
0.63 |
TARS |
6897 |
P26639 |
0.63 |
UGP2 |
7360 |
Q16851 |
0.63 |
ZYX |
7791 |
Q15942 |
0.63 |
HUWE1 |
10075 |
Q7Z6Z7 |
0.63 |
YAP1 |
10413 |
P46937 |
0.63 |
NUDC |
10726 |
Q9Y266 |
0.63 |
PUF60 |
22827 |
Q9UHX1 |
0.63 |
CORO1C |
23603 |
Q9ULV4 |
0.63 |
CORO1B |
57175 |
Q9BR76 |
0.63 |
FAM129B |
64855 |
Q96TA1 |
0.63 |
PKM |
5315 |
P14618 |
0.68 |
REL |
5966 |
Q04864 |
0.78 |
CPSF1 |
29894 |
Q10570 |
0.87 |