Gene Symbol | KHDRBS1 |
Entrez ID | 10657 |
Uniprot ID | Q07666 |
Description | KH domain containing, RNA binding, signal transduction associated 1 |
Chromosomal Location | chr1: 32,013,829-32,060,850 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0000086 |
G2/M transition of mitotic cell cycle |
The mitotic cell cycle transition by which a cell in G2 commits to M phase. The process begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed. This is accomplished by activating a positive feedback loop that results in the accumulation of unphosphorylated and active M cyclin/CDK complex. |
ISS |
BP |
GO:0006351 |
transcription, DNA-templated |
The cellular synthesis of RNA on a template of DNA. |
IEA |
BP |
GO:0006397 |
mRNA processing |
Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
IEA |
BP |
GO:0007050 |
cell cycle arrest |
A regulatory process that halts progression through the cell cycle during one of the normal phases (G1, S, G2, M). |
TAS |
BP |
GO:0007165 |
signal transduction |
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
TAS |
BP |
GO:0007166 |
cell surface receptor signaling pathway |
A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription. |
IDA |
BP |
GO:0008283 |
cell proliferation |
The multiplication or reproduction of cells, resulting in the expansion of a cell population. |
TAS |
BP |
GO:0009967 |
positive regulation of signal transduction |
Any process that activates or increases the frequency, rate or extent of signal transduction. |
IEA |
BP |
GO:0045892 |
negative regulation of transcription, DNA-templated |
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
ISS |
BP |
GO:0045948 |
positive regulation of translational initiation |
Any process that activates or increases the frequency, rate or extent of translational initiation. |
IDA |
BP |
GO:0046831 |
regulation of RNA export from nucleus |
Any process that modulates the frequency, rate or extent of the directed movement of RNA from the nucleus to the cytoplasm. |
ISS |
BP |
GO:0046833 |
positive regulation of RNA export from nucleus |
Any process that activates or increases the frequency, rate or extent of directed movement of RNA from the nucleus into the cytoplasm. |
IDA |
CC |
GO:0005634 |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
IDA |
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
IDA|TAS |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
TAS |
CC |
GO:0016020 |
membrane |
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
IDA |
CC |
GO:0070618 |
Grb2-Sos complex |
A protein complex that contains Grb2 and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway. |
IEA |
MF |
GO:0003677 |
DNA binding |
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
TAS |
MF |
GO:0003723 |
RNA binding |
Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
IDA |
MF |
GO:0005070 |
SH3/SH2 adaptor activity |
Interacting selectively and non-covalently and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68). |
IPI |
MF |
GO:0005515 |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IPI |
MF |
GO:0008143 |
poly(A) binding |
Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA. |
IDA |
MF |
GO:0008266 |
poly(U) RNA binding |
Interacting selectively and non-covalently with a sequence of uracil residues in an RNA molecule. |
IDA |
MF |
GO:0017124 |
SH3 domain binding |
Interacting selectively and non-covalently with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins. |
IEA |
MF |
GO:0032403 |
protein complex binding |
Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IEA |
MF |
GO:0044822 |
poly(A) RNA binding |
Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases. |
IDA |
Domain ID | Description |
---|---|
IPR004087 |
K Homology domain |
IPR004088 |
K Homology domain, type 1 |
IPR032335 |
Sam68, tyrosine-rich domain |
IPR032571 |
KHDRBS, Qua1 domain |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
WP2034 |
Leptin signaling pathway |
WikiPathways |
h_sam68Pathway |
Regulation of Splicing through Sam68 |
BioCarta |
Tissue | Cell Type |
---|---|
adrenal gland |
glandular cells |
appendix |
glandular cells |
breast |
glandular cells |
breast |
myoepithelial cells |
bronchus |
respiratory epithelial cells |
caudate |
neuronal cells |
cerebellum |
cells in granular layer |
cerebellum |
cells in molecular layer |
cerebellum |
Purkinje cells |
cerebral cortex |
endothelial cells |
cerebral cortex |
glial cells |
cerebral cortex |
neuronal cells |
cervix, uterine |
glandular cells |
cervix, uterine |
squamous epithelial cells |
colon |
glandular cells |
colon |
peripheral nerve/ganglion |
duodenum |
glandular cells |
endometrium |
cells in endometrial stroma |
endometrium |
glandular cells |
epididymis |
glandular cells |
esophagus |
squamous epithelial cells |
fallopian tube |
glandular cells |
gallbladder |
glandular cells |
heart muscle |
myocytes |
kidney |
cells in glomeruli |
kidney |
cells in tubules |
lung |
macrophages |
lung |
pneumocytes |
lymph node |
germinal center cells |
lymph node |
non-germinal center cells |
nasopharynx |
respiratory epithelial cells |
oral mucosa |
squamous epithelial cells |
ovary |
follicle cells |
ovary |
ovarian stroma cells |
pancreas |
exocrine glandular cells |
pancreas |
islets of Langerhans |
placenta |
decidual cells |
placenta |
trophoblastic cells |
prostate |
glandular cells |
rectum |
glandular cells |
salivary gland |
glandular cells |
seminal vesicle |
glandular cells |
skeletal muscle |
myocytes |
skin |
fibroblasts |
skin |
keratinocytes |
skin |
Langerhans |
skin |
melanocytes |
skin |
epidermal cells |
small intestine |
glandular cells |
smooth muscle |
smooth muscle cells |
soft tissue |
chondrocytes |
soft tissue |
fibroblasts |
spleen |
cells in red pulp |
spleen |
cells in white pulp |
stomach |
glandular cells |
testis |
cells in seminiferous ducts |
testis |
Leydig cells |
thyroid gland |
glandular cells |
tonsil |
germinal center cells |
tonsil |
non-germinal center cells |
tonsil |
squamous epithelial cells |
urinary bladder |
urothelial cells |
vagina |
squamous epithelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
AMPH |
273 |
P49418 |
0.49 |
COPA |
1314 |
P53621 |
0.49 |
DHX15 |
1665 |
O43143 |
0.49 |
DLG1 |
1739 |
Q12959 |
0.49 |
DLG2 |
1740 |
Q15700 |
0.49 |
DLG3 |
1741 |
Q92796 |
0.49 |
DLG4 |
1742 |
P78352 |
0.49 |
DOCK2 |
1794 |
Q92608 |
0.49 |
DOCK3 |
1795 |
Q8IZD9 |
0.49 |
FRK |
2444 |
P42685 |
0.49 |
MYO1C |
4641 |
O00159 |
0.49 |
MYO7A |
4647 |
Q13402 |
0.49 |
NPHP1 |
4867 |
O15259 |
0.49 |
ATXN2 |
6311 |
Q99700 |
0.49 |
ITSN1 |
6453 |
Q15811 |
0.49 |
TJP1 |
7082 |
Q07157 |
0.49 |
NCK2 |
8440 |
O43639 |
0.49 |
USO1 |
8615 |
O60763 |
0.49 |
SKAP2 |
8935 |
O75563 |
0.49 |
PSTPIP1 |
9051 |
O43586 |
0.49 |
TSPOAP1 |
9256 |
O95153 |
0.49 |
SH3PXD2A |
9644 |
Q5TCZ1 |
0.49 |
RUSC2 |
9853 |
Q8N2Y8 |
0.49 |
ABI2 |
10152 |
Q9NYB9 |
0.49 |
SYNCRIP |
10492 |
O60506 |
0.49 |
DDX17 |
10521 |
Q92841 |
0.49 |
GLRX3 |
10539 |
O76003 |
0.49 |
SORBS1 |
10580 |
Q9BX66 |
0.49 |
ATXN2L |
11273 |
Q8WWM7 |
0.49 |
ARHGEF9 |
23229 |
O43307 |
0.49 |
DNMBP |
23268 |
Q6XZF7 |
0.49 |
SASH1 |
23328 |
O94885 |
0.49 |
PPP1R13B |
23368 |
Q96KQ4 |
0.49 |
NCSTN |
23385 |
Q92542 |
0.49 |
CD2AP |
23607 |
Q9Y5K6 |
0.49 |
SH3YL1 |
26751 |
Q96HL8 |
0.49 |
ARHGEF4 |
50649 |
Q9NR80 |
0.49 |
SNX9 |
51429 |
Q9Y5X1 |
0.49 |
NCKIPSD |
51517 |
Q9NZQ3 |
0.49 |
MPP6 |
51678 |
Q9NZW5 |
0.49 |
WBP11 |
51729 |
Q9Y2W2 |
0.49 |
AHI1 |
54806 |
Q8N157 |
0.49 |
BAIAP2L1 |
55971 |
Q9UHR4 |
0.49 |
ZDHHC6 |
64429 |
Q9H6R6 |
0.49 |
RBM15 |
64783 |
Q96T37 |
0.49 |
UBASH3B |
84959 |
Q8TF42 |
0.49 |
MIA2 |
117153 |
Q96PC5 |
0.49 |
SPATA13 |
221178 |
Q96N96 |
0.49 |
SNX30 |
401548 |
Q5VWJ9 |
0.49 |
PLCG2 |
5336 |
P16885 |
0.55 |
GRAP |
10750 |
Q13588 |
0.55 |
FGR |
2268 |
P09769 |
0.62 |
CASP8 |
841 |
Q14790 |
0.63 |
CRKL |
1399 |
P46109 |
0.63 |
SCG5 |
6447 |
P05408 |
0.63 |
SSFA2 |
6744 |
P28290 |
0.63 |
TBL1X |
6907 |
O60907 |
0.63 |
PIK3R3 |
8503 |
Q92569 |
0.63 |
HDAC6 |
10013 |
Q9UBN7 |
0.63 |
TOB1 |
10140 |
P50616 |
0.63 |
TUBB3 |
10381 |
Q13509 |
0.63 |
RBFOX2 |
23543 |
O43251 |
0.63 |
POT1 |
25913 |
Q9NUX5 |
0.63 |
RBMX |
27316 |
P38159 |
0.63 |
CREB3L3 |
84699 |
Q68CJ9 |
0.63 |
CBL |
867 |
P22681 |
0.65 |
JAK3 |
3718 |
P52333 |
0.65 |
PTPN6 |
5777 |
P29350 |
0.65 |
RIPK1 |
8737 |
Q13546 |
0.68 |
OSTF1 |
26578 |
Q92882 |
0.73 |
SH3KBP1 |
30011 |
Q96B97 |
0.73 |
ITSN2 |
50618 |
Q9NZM3 |
0.73 |
RAPSN |
5913 |
Q13702 |
0.77 |
PTK6 |
5753 |
Q13882 |
0.79 |
ZBTB7A |
51341 |
O95365 |
0.79 |
BTK |
695 |
Q06187 |
0.83 |
CRK |
1398 |
P46108 |
0.85 |
HNRNPA1 |
3178 |
P09651 |
0.85 |
NCF1 |
653361 |
P14598 |
0.85 |
STAT3 |
6774 |
P40763 |
0.86 |
ITK |
3702 |
Q08881 |
0.89 |
LCK |
3932 |
P06239 |
0.89 |
LYN |
4067 |
P07948 |
0.89 |
HCK |
3055 |
P08631 |
0.90 |
HNRNPK |
3190 |
P61978 |
0.90 |
PLCG1 |
5335 |
P19174 |
0.90 |
RASA1 |
5921 |
P20936 |
0.90 |
YES1 |
7525 |
P07947 |
0.90 |
CREBBP |
1387 |
Q92793 |
0.96 |
NCK1 |
4690 |
P16333 |
0.96 |
KHDRBS1 |
10657 |
Q07666 |
0.96 |
FYN |
2534 |
P06241 |
0.97 |
GRB2 |
2885 |
P62993 |
0.97 |
PIK3R1 |
5295 |
P27986 |
0.97 |
SRC |
6714 |
P12931 |
0.99 |
EWSR1 |
2130 |
Q01844 |
0.49 |
HNRNPC |
3183 |
P07910 |
0.49 |
SFPQ |
6421 |
P23246 |
0.49 |
SRSF3 |
6428 |
P84103 |
0.49 |
TUBB4A |
10382 |
P04350 |
0.49 |
CLK1 |
1195 |
P49759 |
0.52 |
MAPK1 |
5594 |
P28482 |
0.52 |
SNRPN |
6638 |
P63162 |
0.52 |
SRPK2 |
6733 |
P78362 |
0.52 |
HNRNPR |
10236 |
O43390 |
0.59 |
ACTB |
60 |
P60709 |
0.63 |
BMI1 |
648 |
P35226 |
0.63 |
CD81 |
975 |
P60033 |
0.63 |
CDC5L |
988 |
Q99459 |
0.63 |
CIRBP |
1153 |
Q14011 |
0.63 |
CRY1 |
1407 |
Q16526 |
0.63 |
CRY2 |
1408 |
Q49AN0 |
0.63 |
CSNK1E |
1454 |
P49674 |
0.63 |
DDX5 |
1655 |
P17844 |
0.63 |
EP300 |
2033 |
Q09472 |
0.63 |
ESR2 |
2100 |
Q92731 |
0.63 |
EZH2 |
2146 |
Q15910 |
0.63 |
EFEMP1 |
2202 |
Q12805 |
0.63 |
JUN |
3725 |
P05412 |
0.63 |
SMAD2 |
4087 |
Q15796 |
0.63 |
MC1R |
4157 |
Q01726 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
RNF2 |
6045 |
Q99496 |
0.63 |
RPA1 |
6117 |
P27694 |
0.63 |
RPA2 |
6118 |
P15927 |
0.63 |
RPA3 |
6119 |
P35244 |
0.63 |
SH3GL1 |
6455 |
Q99961 |
0.63 |
TNFRSF1A |
7132 |
P19438 |
0.63 |
TP53 |
7157 |
P04637 |
0.63 |
SF1 |
7536 |
Q15637 |
0.63 |
HIST1H3A |
8350 |
P68431 |
0.63 |
CUL3 |
8452 |
Q13618 |
0.63 |
FADD |
8772 |
Q13158 |
0.63 |
KIAA0101 |
9768 |
Q15004 |
0.63 |
CUL7 |
9820 |
Q14999 |
0.63 |
RBM7 |
10179 |
Q9Y580 |
0.63 |
GPHN |
10243 |
Q9NQX3 |
0.63 |
SRRM1 |
10250 |
Q8IYB3 |
0.63 |
STUB1 |
10273 |
Q9UNE7 |
0.63 |
CD2BP2 |
10421 |
O95400 |
0.63 |
EMG1 |
10436 |
Q92979 |
0.63 |
PACSIN2 |
11252 |
Q9UNF0 |
0.63 |
U2AF2 |
11338 |
P26368 |
0.63 |
RALY |
22913 |
Q9UKM9 |
0.63 |
SNW1 |
22938 |
Q13573 |
0.63 |
FBXW11 |
23291 |
Q9UKB1 |
0.63 |
OBSL1 |
23363 |
O75147 |
0.63 |
SUZ12 |
23512 |
Q15022 |
0.63 |
AGO1 |
26523 |
Q9UL18 |
0.63 |
DROSHA |
29102 |
Q9NRR4 |
0.63 |
AZIN1 |
51582 |
O14977 |
0.63 |
BANP |
54971 |
Q8N9N5 |
0.63 |
LGR4 |
55366 |
Q9BXB1 |
0.63 |
CAND1 |
55832 |
Q86VP6 |
0.63 |
SMARCAD1 |
56916 |
Q9H4L7 |
0.63 |
PTBP2 |
58155 |
Q9UKA9 |
0.63 |
TNS3 |
64759 |
Q68CZ2 |
0.63 |
CCDC8 |
83987 |
Q9H0W5 |
0.63 |
MAP1LC3A |
84557 |
Q9H492 |
0.63 |
FYN |
N/A |
Q14342 |
0.63 |
CSK |
1445 |
P41240 |
0.65 |
TNFSF11 |
8600 |
O14788 |
0.65 |
ESR1 |
2099 |
P03372 |
0.67 |
UBA52 |
7311 |
P62987 |
0.67 |
APBB1 |
322 |
O00213 |
0.68 |
GAS7 |
8522 |
O60861 |
0.68 |
PPP1CB |
5500 |
P62140 |
0.72 |
MATR3 |
9782 |
P43243 |
0.72 |
CBX6 |
23466 |
O95503 |
0.72 |
MPHOSPH8 |
54737 |
Q99549 |
0.72 |
KHDRBS2 |
202559 |
Q5VWX1 |
0.72 |
KHDRBS3 |
10656 |
O75525 |
0.73 |
PACSIN3 |
29763 |
Q9UKS6 |
0.73 |
PACSIN1 |
29993 |
Q9BY11 |
0.73 |
YTHDC1 |
91746 |
Q96MU7 |
0.77 |
SMARCA2 |
6595 |
P51531 |
0.78 |
SUMO1 |
7341 |
P63165 |
0.78 |
VAV1 |
7409 |
P15498 |
0.78 |
IRS1 |
3667 |
P35568 |
0.82 |
INSR |
3643 |
P06213 |
0.84 |
FNBP4 |
23360 |
Q8N3X1 |
0.85 |
GRAP2 |
9402 |
O75791 |
0.86 |
WBP4 |
11193 |
O75554 |
0.88 |
DHX9 |
1660 |
Q08211 |
0.89 |
PRMT1 |
3276 |
Q99873 |
0.95 |