Protein Description

Gene Symbol POLR3F
Entrez ID 10621
Uniprot ID Q9H1D9
Description polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa
Chromosomal Location chr20: 18,467,127-18,484,643
Ontology GO ID GO Term Definition Evidence

BP

GO:0006359

regulation of transcription from RNA polymerase III promoter

Any process that modulates the frequency, rate or extent of transcription from an RNA ploymerase III promoter.

NAS

BP

GO:0006383

transcription from RNA polymerase III promoter

The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter.

IEA

BP

GO:0032481

positive regulation of type I interferon production

Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.

TAS

BP

GO:0032728

positive regulation of interferon-beta production

Any process that activates or increases the frequency, rate, or extent of interferon-beta production.

IMP

BP

GO:0045087

innate immune response

Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.

IEA

BP

GO:0045089

positive regulation of innate immune response

Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection.

IMP

BP

GO:0051607

defense response to virus

Reactions triggered in response to the presence of a virus that act to protect the cell or organism.

IEA

CC

GO:0005654

nucleoplasm

That part of the nuclear content other than the chromosomes or the nucleolus.

TAS

CC

GO:0005666

DNA-directed RNA polymerase III complex

RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.

IDA|NAS

CC

GO:0005829

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

TAS

MF

GO:0001056

RNA polymerase III activity

Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase III specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.

IBA

MF

GO:0003899

DNA-directed RNA polymerase activity

Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.

NAS

Domain ID Description

IPR007832

RNA polymerase Rpc34

IPR011991

Winged helix-turn-helix DNA-binding domain

IPR016049

RNA polymerase Rpc34-like

Pathway ID Pathway Term Pathway Source

hsa00230

Purine metabolism

KEGG

hsa00240

Pyrimidine metabolism

KEGG

hsa01100

Metabolic pathways

KEGG

hsa03020

RNA polymerase

KEGG

hsa04623

Cytosolic DNA-sensing pathway

KEGG

hsa05169

Epstein-Barr virus infection

KEGG

No diseases found.

Tissue Cell Type

pancreas

exocrine glandular cells

testis

cells in seminiferous ducts

thyroid gland

glandular cells

No databases found.

Pubmed ID Author Year Title

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

Gene Symbol Entrez ID Uniprot ID Score

RRP12

23223

Q5JTH9

0.49

BDP1

55814

A6H8Y1

0.52

SMARCA4

6597

P51532

0.56

POLR3K

51728

Q9Y2Y1

0.56

POLR3H

171568

Q9Y535

0.58

POLR3G

10622

O15318

0.59

BRF1

2972

Q92994

0.62

UBE2G2

7327

P60604

0.63

TNS2

23371

Q63HR2

0.63

RIF1

55183

Q5UIP0

0.63

LRIF1

55791

Q5T3J3

0.63

RIN3

79890

Q8TB24

0.63

WDR89

112840

Q96FK6

0.63

TBP

6908

P20226

0.75

GTF3C4

9329

Q9UKN8

0.76

POLR2B

5431

P30876

0.49

RSL1D1

26156

O76021

0.49

NOP58

51602

Q9Y2X3

0.49

RBM28

55131

Q9NW13

0.49

POLR3A

11128

O14802

0.56

CRCP

27297

O75575

0.56

POLR1D

51082

Q9Y2S0

0.56

POLR3B

55703

Q9NW08

0.56

POLR2E

5434

P19388

0.58

POLR1C

9533

O15160

0.58

ELAVL1

1994

Q15717

0.63

BBOX1

8424

O75936

0.63

STC2

8614

O76061

0.63

C14orf1

11161

Q9UKR5

0.63

MAF1

84232

Q9H063

0.63

KAT5

10524

Q92993

0.65

RXRB

6257

P28702

0.72

BAG6

7917

P46379

0.72

PNRC1

10957

Q12796

0.72

SUV39H2

79723

Q9H5I1

0.72

NEDD1

121441

Q8NHV4

0.72

PRPF4B

8899

Q13523

0.76

POLR3E

55718

Q9NVU0

0.82

POLR3D

661

P05423

0.83

POLR3C

10623

Q9BUI4

0.85

POLR2F

5435

P61218

0.88