Gene Symbol | CDH2 |
Entrez ID | 1000 |
Uniprot ID | P19022 |
Description | cadherin 2, type 1, N-cadherin (neuronal) |
Chromosomal Location | chr18: 27,950,966-28,177,446 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0007155 |
cell adhesion |
The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
TAS |
BP |
GO:0007156 |
homophilic cell adhesion via plasma membrane adhesion molecules |
The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell. |
IEA |
BP |
GO:0007157 |
heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules |
The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell. |
IEA |
BP |
GO:0010001 |
glial cell differentiation |
The process in which a relatively unspecialized cell acquires the specialized features of a glial cell. |
ISS |
BP |
GO:0016339 |
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules |
The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction. |
IEA |
BP |
GO:0016477 |
cell migration |
The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. Cell migration is a central process in the development and maintenance of multicellular organisms. |
IEA |
BP |
GO:0021987 |
cerebral cortex development |
The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon. |
IEA |
BP |
GO:0034332 |
adherens junction organization |
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an adherens junction. An adherens junction is a cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments. |
TAS |
BP |
GO:0043410 |
positive regulation of MAPK cascade |
Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade. |
IEA |
BP |
GO:0044331 |
cell-cell adhesion mediated by cadherin |
The attachment of one cell to another cell via a cadherin, transmembrane proteins having repeating extracellular calcium ion binding domains. |
ISS |
BP |
GO:0048514 |
blood vessel morphogenesis |
The process in which the anatomical structures of blood vessels are generated and organized. The blood vessel is the vasculature carrying blood. |
IEA |
BP |
GO:0048854 |
brain morphogenesis |
The process in which the anatomical structures of the brain are generated and organized. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.). |
IEA |
BP |
GO:0048872 |
homeostasis of number of cells |
Any biological process involved in the maintenance of the steady-state number of cells within a population of cells. |
IEA |
BP |
GO:0051146 |
striated muscle cell differentiation |
The process in which a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle. |
IEA |
BP |
GO:0051149 |
positive regulation of muscle cell differentiation |
Any process that activates or increases the frequency, rate or extent of muscle cell differentiation. |
TAS |
BP |
GO:0060019 |
radial glial cell differentiation |
The process in which neuroepithelial cells of the neural tube give rise to radial glial cells, specialized bipotential progenitors cells of the brain. Differentiation includes the processes involved in commitment of a cell to a specific fate. |
IEA |
BP |
GO:0060563 |
neuroepithelial cell differentiation |
The process in which epiblast cells acquire specialized features of neuroepithelial cells. |
IEA |
BP |
GO:0070445 |
regulation of oligodendrocyte progenitor proliferation |
Any process that modulates the frequency, rate or extent of oligodendrocyte progenitor proliferation. |
IEA |
BP |
GO:0090002 |
establishment of protein localization to plasma membrane |
The directed movement of a protein to a specific location in the plasma membrane. |
IEA |
BP |
GO:0090090 |
negative regulation of canonical Wnt signaling pathway |
Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. |
IEA |
BP |
GO:0097118 |
neuroligin clustering involved in postsynaptic membrane assembly |
The receptor clustering process involved in assembly of the postsynaptic membrane in which neuroligins are localized to distinct domains in the cell membrane. Neuroligins are neuronal cell surface proteins on the postsynaptic membrane that mediate synapse formation between neurons. |
IEA |
BP |
GO:0097150 |
neuronal stem cell population maintenance |
Any process in by an organism or tissue maintains a population of neuronal stem cells. |
ISS |
BP |
GO:1902897 |
regulation of postsynaptic density protein 95 clustering |
Any process that modulates the frequency, rate or extent of postsynaptic density protein 95 clustering. |
IEA |
BP |
GO:2000809 |
positive regulation of synaptic vesicle clustering |
Any process that activates or increases the frequency, rate or extent of synaptic vesicle clustering. |
IEA |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
CC |
GO:0005886 |
plasma membrane |
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
IDA|TAS |
CC |
GO:0005911 |
cell-cell junction |
A cell junction that forms a connection between two or more cells in a multicellular organism; excludes direct cytoplasmic junctions such as ring canals. |
IDA |
CC |
GO:0005913 |
cell-cell adherens junction |
An adherens junction which connects a cell to another cell. |
IDA |
CC |
GO:0005916 |
fascia adherens |
A cell-cell adherens junction that contains the transmembrane protein N-cadherin, which interacts with identical molecules from neighboring cells to form a tight mechanical intercellular link; forms a large portion of the intercalated disc, the structure at which myofibrils terminate in cardiomyocytes. |
IEA |
CC |
GO:0005925 |
focal adhesion |
Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments. |
IDA |
CC |
GO:0014704 |
intercalated disc |
A complex cell-cell junction at which myofibrils terminate in cardiomyocytes; mediates mechanical and electrochemical integration between individual cardiomyocytes. The intercalated disc contains regions of tight mechanical attachment (fasciae adherentes and desmosomes) and electrical coupling (gap junctions) between adjacent cells. |
ISS |
CC |
GO:0016021 |
integral component of membrane |
The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
IEA |
CC |
GO:0016323 |
basolateral plasma membrane |
The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis. |
IEA |
CC |
GO:0016324 |
apical plasma membrane |
The region of the plasma membrane located at the apical end of the cell. |
IEA |
CC |
GO:0016342 |
catenin complex |
Complex of peripheral cytoplasmic proteins (alpha-, beta- and gamma-catenin) that interact with the cytoplasmic region of uvomorulin/E-cadherin to connect it to the actin cytoskeleton. |
IDA |
CC |
GO:0030027 |
lamellipodium |
A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments. |
IDA |
CC |
GO:0030864 |
cortical actin cytoskeleton |
The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane. |
IDA |
CC |
GO:0044853 |
plasma membrane raft |
A membrane raft that is part of the plasma membrane. |
IEA |
CC |
GO:0045202 |
synapse |
The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane. |
IEA |
CC |
GO:0070062 |
extracellular exosome |
A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
IDA |
MF |
GO:0005509 |
calcium ion binding |
Interacting selectively and non-covalently with calcium ions (Ca2+). |
IEA |
MF |
GO:0008013 |
beta-catenin binding |
Interacting selectively and non-covalently with the beta subunit of the catenin complex. |
TAS |
MF |
GO:0019903 |
protein phosphatase binding |
Interacting selectively and non-covalently with any protein phosphatase. |
IEA |
MF |
GO:0045294 |
alpha-catenin binding |
Interacting selectively and non-covalently with the alpha subunit of the catenin complex. |
IPI |
MF |
GO:0045295 |
gamma-catenin binding |
Interacting selectively and non-covalently with the gamma subunit of the catenin complex. |
IPI |
Domain ID | Description |
---|---|
IPR000233 |
Cadherin, cytoplasmic domain |
IPR002126 |
Cadherin |
IPR014868 |
Cadherin prodomain |
IPR015919 |
Cadherin-like |
IPR020894 |
Cadherin conserved site |
IPR027397 |
Catenin binding domain |
IPR030051 |
N-cadherin |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa04514 |
Cell adhesion molecules (CAMs) |
KEGG |
hsa05412 |
Arrhythmogenic right ventricular cardiomyopathy (ARVC) |
KEGG |
WP3859 |
TGF-B Signaling in Thyroid Cells for Epithelial-Mesenchymal Transition |
WikiPathways |
WP2572 |
Primary Focal Segmental Glomerulosclerosis FSGS |
WikiPathways |
WP2064 |
Neural Crest Differentiation |
WikiPathways |
WP2118 |
Arrhythmogenic Right Ventricular Cardiomyopathy |
WikiPathways |
WP2380 |
Brain-Derived Neurotrophic Factor (BDNF) signaling pathway |
WikiPathways |
UMLS CUI | UMLS Term |
---|---|
C0027627 |
Neoplasm Metastasis |
C0027746 |
Nerve Degeneration |
C0038220 |
Status Epilepticus |
C0038356 |
Stomach Neoplasms |
C0151744 |
Myocardial Ischemia |
C0242656 |
Disease Progression |
Tissue | Cell Type |
---|---|
adrenal gland |
glandular cells |
cerebral cortex |
neuropil |
fallopian tube |
glandular cells |
heart muscle |
myocytes |
kidney |
cells in tubules |
liver |
bile duct cells |
liver |
hepatocytes |
testis |
cells in seminiferous ducts |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
MRPL49 |
740 |
Q13405 |
0.49 |
DBN1 |
1627 |
Q16643 |
0.49 |
GAA |
2548 |
P10253 |
0.49 |
ICT1 |
3396 |
Q14197 |
0.49 |
KTN1 |
3895 |
Q86UP2 |
0.49 |
PC |
5091 |
P11498 |
0.49 |
PRKAR1A |
5573 |
P10644 |
0.49 |
PRPH |
5630 |
P41219 |
0.49 |
RPL3 |
6122 |
P39023 |
0.49 |
RPL8 |
6132 |
P62917 |
0.49 |
RPL21 |
6144 |
P46778 |
0.49 |
MRPL23 |
6150 |
Q16540 |
0.49 |
RPL32 |
6161 |
P62910 |
0.49 |
RPS16 |
6217 |
P62249 |
0.49 |
RPS26 |
6231 |
P62854 |
0.49 |
SPTBN1 |
6711 |
Q01082 |
0.49 |
SSR4 |
6748 |
P51571 |
0.49 |
SUPT5H |
6829 |
O00267 |
0.49 |
TPM4 |
7171 |
P67936 |
0.49 |
RPL14 |
9045 |
P50914 |
0.49 |
PPT2 |
9374 |
Q9UMR5 |
0.49 |
PDIA4 |
9601 |
P13667 |
0.49 |
PTBP3 |
9991 |
O95758 |
0.49 |
NENF |
29937 |
Q9UMX5 |
0.49 |
SARS2 |
54938 |
Q9NP81 |
0.49 |
IARS2 |
55699 |
Q9NSE4 |
0.49 |
PRKCDBP |
112464 |
Q969G5 |
0.49 |
TMEM256 |
254863 |
Q8N2U0 |
0.49 |
NACA2 |
342538 |
Q9H009 |
0.49 |
CTNND2 |
1501 |
Q9UQB3 |
0.59 |
CCNA2 |
890 |
P20248 |
0.63 |
SKP1 |
6500 |
P63208 |
0.63 |
EXOC5 |
10640 |
O00471 |
0.63 |
CREBBP |
1387 |
Q92793 |
0.65 |
PTPN12 |
5782 |
Q05209 |
0.68 |
PTPRC |
5788 |
P08575 |
0.68 |
PTPRG |
5793 |
P23470 |
0.68 |
PTPRJ |
5795 |
Q12913 |
0.68 |
PTPRR |
5801 |
Q15256 |
0.68 |
ACTA1 |
58 |
P68133 |
0.72 |
CTNND1 |
1500 |
O60716 |
0.89 |
MTHFD1 |
4522 |
P11586 |
0.49 |
FGFR4 |
2264 |
P22455 |
0.52 |
GRIK2 |
2898 |
Q13002 |
0.52 |
GRIN2D |
2906 |
O15399 |
0.52 |
PIK3R1 |
5295 |
P27986 |
0.52 |
GRIN1 |
2902 |
Q05586 |
0.59 |
ARVCF |
421 |
O00192 |
0.62 |
DDR1 |
780 |
Q08345 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
DDR2 |
4921 |
Q16832 |
0.63 |
RYK |
6259 |
P34925 |
0.63 |
PKP4 |
8502 |
Q99569 |
0.63 |
FBXO45 |
200933 |
P0C2W1 |
0.63 |
PTPN6 |
5777 |
P29350 |
0.68 |
PTPN7 |
5778 |
P35236 |
0.68 |
PTPRB |
5787 |
P23467 |
0.68 |
PTPRK |
5796 |
Q15262 |
0.68 |
PTPRO |
5800 |
Q16827 |
0.68 |
PTPN22 |
26191 |
Q9Y2R2 |
0.68 |
RAB8B |
51762 |
Q92930 |
0.72 |
CDH4 |
1002 |
P55283 |
0.73 |
CDH11 |
1009 |
P55287 |
0.73 |
CDON |
50937 |
Q4KMG0 |
0.73 |
BOC |
91653 |
Q9BWV1 |
0.73 |
GNA12 |
2768 |
Q03113 |
0.78 |
GNA13 |
10672 |
Q14344 |
0.78 |
LRRC7 |
57554 |
Q96NW7 |
0.79 |
CTNNA1 |
1495 |
P35221 |
0.88 |
JUP |
3728 |
P14923 |
0.89 |
PTPN1 |
5770 |
P18031 |
0.94 |
CTNNB1 |
1499 |
P35222 |
1.00 |