Gene Symbol | SEMA3A |
Entrez ID | 10371 |
Uniprot ID | Q14563 |
Description | sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A |
Chromosomal Location | chr7: 83,955,777-84,492,724 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0001755 |
neural crest cell migration |
The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo. |
IBA |
BP |
GO:0001764 |
neuron migration |
The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature. |
ISS |
BP |
GO:0002027 |
regulation of heart rate |
Any process that modulates the frequency or rate of heart contraction. |
IEA |
BP |
GO:0006915 |
apoptotic process |
A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. |
IEA |
BP |
GO:0007411 |
axon guidance |
The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues. |
TAS |
BP |
GO:0007413 |
axonal fasciculation |
The collection of axons into a bundle of rods, known as a fascicle. |
IEA |
BP |
GO:0010633 |
negative regulation of epithelial cell migration |
Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell migration. |
IEA |
BP |
GO:0010977 |
negative regulation of neuron projection development |
Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). |
IMP |
BP |
GO:0021612 |
facial nerve structural organization |
The process that contributes to the act of creating the structural organization of the facial nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities. |
IEA |
BP |
GO:0021637 |
trigeminal nerve structural organization |
The process that contributes to the act of creating the structural organization of the oculomotor nerve. This process pertains to the physical shaping of a rudimentary structure. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. |
IEA |
BP |
GO:0021675 |
nerve development |
The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure. |
ISS |
BP |
GO:0021772 |
olfactory bulb development |
The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex. |
IMP |
BP |
GO:0021785 |
branchiomotor neuron axon guidance |
The process in which a branchiomotor neuron growth cone is directed to a specific target site. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx. |
IEA |
BP |
GO:0021828 |
gonadotrophin-releasing hormone neuronal migration to the hypothalamus |
The directional movement of a gonadotrophin-releasing hormone producing neuron from the nasal placode to the hypothalamus. |
IEA |
BP |
GO:0036486 |
ventral trunk neural crest cell migration |
The movement of trunk neural crest cells from the neural tube, travelling ventrally through the anterior half of each sclerotome. Trunk neural crest cells that remain in the sclerotome form the dorsal root ganglia containing the sensory neurons. Trunk neural crest cells that continue more ventrally form the sympathetic ganglia, the adrenal medulla, and the nerve clusters surrounding the aorta. |
IEA |
BP |
GO:0048485 |
sympathetic nervous system development |
The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter. |
TAS |
BP |
GO:0048813 |
dendrite morphogenesis |
The process in which the anatomical structures of a dendrite are generated and organized. A dendrite is a freely branching protoplasmic process of a nerve cell. |
IEA |
BP |
GO:0048841 |
regulation of axon extension involved in axon guidance |
Any process that modulates the frequency, rate or extent of axon extension involved in axon guidance. |
IDA |
BP |
GO:0048843 |
negative regulation of axon extension involved in axon guidance |
Any process that stops, prevents, or reduces the frequency, rate or extent of axon extension involved in axon guidance. |
IBA |
BP |
GO:0048846 |
axon extension involved in axon guidance |
The long distance growth of a single cell process, that is involved in the migration of an axon growth cone, where the migration is directed to a specific target site by a combination of attractive and repulsive cues. |
ISS |
BP |
GO:0048880 |
sensory system development |
The process whose specific outcome is the progression of a sensory system over time from its formation to the mature structure. |
TAS |
BP |
GO:0050919 |
negative chemotaxis |
The directed movement of a motile cell or organism towards a lower concentration of a chemical. |
IEA |
BP |
GO:0060385 |
axonogenesis involved in innervation |
The neurite development process that generates a long process of a neuron, as it invades a target tissue. |
ISS |
BP |
GO:0060666 |
dichotomous subdivision of terminal units involved in salivary gland branching |
The process in which a salivary epithelial cord bifurcates at its end. |
IEA |
BP |
GO:0061549 |
sympathetic ganglion development |
The process whose specific outcome is the progression of a sympathetic ganglion over time, from its formation to the mature structure. |
ISS |
BP |
GO:0061551 |
trigeminal ganglion development |
The process whose specific outcome is the progression of a trigeminal ganglion over time, from its formation to the mature structure. |
IEA |
BP |
GO:0071526 |
semaphorin-plexin signaling pathway |
A series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand. |
TAS |
BP |
GO:0097490 |
sympathetic neuron projection extension |
Long distance growth of a single sympathetic neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite. |
ISS |
BP |
GO:0097491 |
sympathetic neuron projection guidance |
The process in which the migration of a sympathetic neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues. |
ISS |
BP |
GO:1901166 |
neural crest cell migration involved in autonomic nervous system development |
Any neural crest cell migration that is involved in autonomic nervous system development. |
ISS |
BP |
GO:1902285 |
semaphorin-plexin signaling pathway involved in neuron projection guidance |
Any semaphorin-plexin signaling pathway that is involved in neuron projection guidance. |
ISS |
BP |
GO:1902287 |
semaphorin-plexin signaling pathway involved in axon guidance |
Any semaphorin-plexin signaling pathway that is involved in axon guidance. |
IEA |
BP |
GO:1903045 |
neural crest cell migration involved in sympathetic nervous system development |
Any neural crest cell migration that is involved in sympathetic nervous system development. |
IEA |
BP |
GO:1903375 |
facioacoustic ganglion development |
The process whose specific outcome is the progression of an acoustico-facial VII-VIII ganglion complex over time, from its formation to the mature structure. |
IEA |
BP |
GO:2000020 |
positive regulation of male gonad development |
Any process that activates or increases the frequency, rate or extent of male gonad development. |
IEA |
BP |
GO:2001224 |
positive regulation of neuron migration |
Any process that activates or increases the frequency, rate or extent of neuron migration. |
IBA |
CC |
GO:0005576 |
extracellular region |
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
TAS |
CC |
GO:0005615 |
extracellular space |
That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
IBA |
CC |
GO:0030424 |
axon |
The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter. |
IBA |
CC |
GO:0030425 |
dendrite |
A neuron projection that has a short, tapering, often branched, morphology, receives and integrates signals from other neurons or from sensory stimuli, and conducts a nerve impulse towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body. |
IEA |
MF |
GO:0030215 |
semaphorin receptor binding |
Interacting selectively and non-covalently with semaphorin receptors. |
IBA |
MF |
GO:0038191 |
neuropilin binding |
Interacting selectively and non-covalently with a member of the neuropilin family. |
IBA|ISS |
MF |
GO:0045499 |
chemorepellent activity |
Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal. |
TAS |
Domain ID | Description |
---|---|
IPR001627 |
Sema domain |
IPR003599 |
Immunoglobulin subtype |
IPR007110 |
Immunoglobulin-like domain |
IPR013783 |
Immunoglobulin-like fold |
IPR015943 |
WD40/YVTN repeat-like-containing domain |
IPR016201 |
PSI domain |
IPR027231 |
Semaphorin |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa04360 |
Axon guidance |
KEGG |
UMLS CUI | UMLS Term |
---|---|
C0162809 |
Kallmann Syndrome |
Tissue | Cell Type |
---|---|
adrenal gland |
glandular cells |
duodenum |
glandular cells |
heart muscle |
myocytes |
nasopharynx |
respiratory epithelial cells |
placenta |
decidual cells |
prostate |
glandular cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
19141577 |
Kim et al. |
2009 |
Transcriptional Profiling with a Pathway-Oriented Analysis Identifies Dysregulated Molecular Phenotypes in the Endometrium of Patients with Polycystic Ovary Syndrome |
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
SEMA3B |
7869 |
Q13214 |
0.52 |
NRP1 |
8829 |
O14786 |
0.76 |
KCND3 |
3752 |
Q9UK17 |
0.63 |
SUMO1 |
7341 |
P63165 |
0.63 |