Gene Symbol | FARP2 |
Entrez ID | 9855 |
Uniprot ID | O94887 |
Description | FERM, ARH/RhoGEF and pleckstrin domain protein 2 |
Chromosomal Location | chr2: 241,356,243-241,494,841 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0007155 |
cell adhesion |
The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
ISS |
BP |
GO:0016322 |
neuron remodeling |
The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development. |
IDA |
BP |
GO:0016601 |
Rac protein signal transduction |
A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state. |
IDA |
BP |
GO:0030316 |
osteoclast differentiation |
The process in which a relatively unspecialized monocyte acquires the specialized features of an osteoclast. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue. |
ISS |
BP |
GO:0031532 |
actin cytoskeleton reorganization |
A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins. |
ISS |
BP |
GO:0033623 |
regulation of integrin activation |
Any process that modulates the frequency, rate, or extent of integrin activation. |
ISS |
BP |
GO:0035023 |
regulation of Rho protein signal transduction |
Any process that modulates the frequency, rate or extent of Rho protein signal transduction. |
IEA |
BP |
GO:0043547 |
positive regulation of GTPase activity |
Any process that activates or increases the activity of a GTPase. |
IEA |
BP |
GO:0071526 |
semaphorin-plexin signaling pathway |
A series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand. |
ISS |
BP |
GO:0071800 |
podosome assembly |
The aggregation, arrangement and bonding together of a set of components to form a podosome, an actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell. |
ISS |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
TAS |
CC |
GO:0005856 |
cytoskeleton |
Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. |
IEA |
CC |
GO:0019898 |
extrinsic component of membrane |
The component of a membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region. |
IEA |
MF |
GO:0005089 |
Rho guanyl-nucleotide exchange factor activity |
Stimulates the exchange of guanyl nucleotides associated with a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase. |
IDA |
MF |
GO:0008092 |
cytoskeletal protein binding |
Interacting selectively and non-covalently with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton). |
IEA |
MF |
GO:0030676 |
Rac guanyl-nucleotide exchange factor activity |
Stimulates the exchange of guanyl nucleotides associated with a GTPase of the Rac family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase. |
ISS |
Domain ID | Description |
---|---|
IPR000219 |
Dbl homology (DH) domain |
IPR000299 |
FERM domain |
IPR000798 |
Ezrin/radixin/moesin-like |
IPR001849 |
Pleckstrin homology domain |
IPR011993 |
PH domain-like |
IPR014352 |
FERM/acyl-CoA-binding protein, 3-helical bundle |
IPR014847 |
FERM adjacent (FA) |
IPR018979 |
FERM, N-terminal |
IPR018980 |
FERM, C-terminal PH-like domain |
IPR019747 |
FERM conserved site |
IPR019748 |
FERM central domain |
IPR019749 |
Band 4.1 domain |
IPR029071 |
Ubiquitin-related domain |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa04015 |
Rap1 signaling pathway |
KEGG |
hsa04520 |
Adherens junction |
KEGG |
WP306 |
Focal Adhesion |
WikiPathways |
UMLS CUI | UMLS Term |
---|---|
C0004352 |
Autistic Disorder |
C0023434 |
Chronic Lymphocytic Leukemia |
C0376358 |
Malignant Neoplasm Of Prostate |
Tissue | Cell Type |
---|---|
adrenal gland |
glandular cells |
appendix |
glandular cells |
breast |
glandular cells |
bronchus |
respiratory epithelial cells |
colon |
glandular cells |
duodenum |
glandular cells |
endometrium |
glandular cells |
epididymis |
glandular cells |
esophagus |
squamous epithelial cells |
fallopian tube |
glandular cells |
gallbladder |
glandular cells |
liver |
hepatocytes |
lung |
macrophages |
lung |
pneumocytes |
nasopharynx |
respiratory epithelial cells |
pancreas |
exocrine glandular cells |
parathyroid gland |
glandular cells |
placenta |
decidual cells |
placenta |
trophoblastic cells |
prostate |
glandular cells |
rectum |
glandular cells |
salivary gland |
glandular cells |
skin |
melanocytes |
small intestine |
glandular cells |
soft tissue |
chondrocytes |
stomach |
glandular cells |
testis |
Leydig cells |
vagina |
squamous epithelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
25393639 |
Ambekar et al. |
2014 |
Proteomics of follicular fluid from women with polycystic ovary syndrome suggests molecular defects in follicular development |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
FYN |
2534 |
P06241 |
0.00 |
TLN1 |
7094 |
Q9Y490 |
0.00 |
YWHAG |
7532 |
P61981 |
0.52 |
SRC |
6714 |
P12931 |
0.55 |
CDC42 |
998 |
P60953 |
0.00 |
PTGER3 |
5733 |
P43115 |
0.63 |
UBE2G2 |
7327 |
P60604 |
0.63 |
XPO1 |
7514 |
O14980 |
0.63 |
CSNK1E |
1454 |
P49674 |
0.72 |
PDZK1 |
5174 |
Q5T2W1 |
0.77 |