Gene Symbol | SEC22B |
Entrez ID | 9554 |
Uniprot ID | O75396 |
Description | SEC22 homolog B, vesicle trafficking protein (gene/pseudogene) |
Chromosomal Location | chr1: 120,150,898-120,176,515 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006888 |
ER to Golgi vesicle-mediated transport |
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi. |
TAS |
BP |
GO:0006890 |
retrograde vesicle-mediated transport, Golgi to ER |
The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG. |
TAS |
BP |
GO:0015031 |
protein transport |
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
IEA |
BP |
GO:0033043 |
regulation of organelle organization |
Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle. |
IMP |
BP |
GO:0045732 |
positive regulation of protein catabolic process |
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. |
IMP |
BP |
GO:0048208 |
COPII vesicle coating |
The addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat. |
TAS |
BP |
GO:0048280 |
vesicle fusion with Golgi apparatus |
The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi. |
IBA |
CC |
GO:0000139 |
Golgi membrane |
The lipid bilayer surrounding any of the compartments of the Golgi apparatus. |
TAS |
CC |
GO:0005789 |
endoplasmic reticulum membrane |
The lipid bilayer surrounding the endoplasmic reticulum. |
TAS |
CC |
GO:0005793 |
endoplasmic reticulum-Golgi intermediate compartment |
A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi and Golgi-to-ER transport. |
IDA |
CC |
GO:0012507 |
ER to Golgi transport vesicle membrane |
The lipid bilayer surrounding a vesicle transporting substances from the endoplasmic reticulum to the Golgi. |
TAS |
CC |
GO:0016021 |
integral component of membrane |
The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
IEA |
CC |
GO:0030133 |
transport vesicle |
Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell. |
TAS |
CC |
GO:0031201 |
SNARE complex |
A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25. |
IBA |
CC |
GO:0033116 |
endoplasmic reticulum-Golgi intermediate compartment membrane |
The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system. |
TAS |
CC |
GO:0042470 |
melanosome |
A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells. |
IEA |
MF |
GO:0000149 |
SNARE binding |
Interacting selectively and non-covalently with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein. |
IBA |
MF |
GO:0005484 |
SNAP receptor activity |
Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion. |
IBA |
MF |
GO:0005515 |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IPI |
MF |
GO:0019905 |
syntaxin binding |
Interacting selectively and non-covalently with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse. |
IEA |
Domain ID | Description |
---|---|
IPR001388 |
Synaptobrevin |
IPR010908 |
Longin domain |
IPR011012 |
Longin-like domain |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa04130 |
SNARE interactions in vesicular transport |
KEGG |
hsa04145 |
Phagosome |
KEGG |
hsa05134 |
Legionellosis |
KEGG |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
23824412 |
Piltonen et al. |
2013 |
Mesenchymal Stem/Progenitors and Other Endometrial Cell Types From Women With Polycystic Ovary Syndrome (PCOS) Display Inflammatory and Oncogenic Potential |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
SERPINH1 |
871 |
P50454 |
0.49 |
MPST |
4357 |
P25325 |
0.49 |
SMARCA2 |
6595 |
P51531 |
0.49 |
STIM1 |
6786 |
Q13586 |
0.49 |
VAMP2 |
6844 |
P63027 |
0.49 |
TCOF1 |
6949 |
Q13428 |
0.49 |
TST |
7263 |
Q16762 |
0.49 |
XRCC1 |
7515 |
P18887 |
0.49 |
ZYX |
7791 |
Q15942 |
0.49 |
SUCLG2 |
8801 |
Q96I99 |
0.49 |
SUCLA2 |
8803 |
Q9P2R7 |
0.49 |
UBE2M |
9040 |
P61081 |
0.49 |
SART1 |
9092 |
O43290 |
0.49 |
VAPB |
9217 |
O95292 |
0.49 |
SEPT9 |
10801 |
Q9UHD8 |
0.49 |
TMED10 |
10972 |
P49755 |
0.49 |
SIN3A |
25942 |
Q96ST3 |
0.49 |
TIMM9 |
26520 |
Q9Y5J7 |
0.49 |
UBXN1 |
51035 |
Q04323 |
0.49 |
TACO1 |
51204 |
Q9BSH4 |
0.49 |
VPS29 |
51699 |
Q9UBQ0 |
0.49 |
TMED9 |
54732 |
Q9BVK6 |
0.49 |
SEPT11 |
55752 |
Q9NVA2 |
0.49 |
TMEM9 |
252839 |
Q9P0T7 |
0.49 |
TMEM189 |
387521 |
A5PLL7 |
0.49 |
STX4 |
6810 |
Q12846 |
0.63 |
CREB3 |
10488 |
O43889 |
0.63 |
STX1A |
6804 |
Q16623 |
0.70 |
STX5 |
6811 |
Q13190 |
0.98 |
CPS1 |
1373 |
P31327 |
0.49 |
TCTN3 |
26123 |
Q6NUS6 |
0.49 |
TMEM216 |
51259 |
Q9P0N5 |
0.49 |
TCTN2 |
79867 |
Q96GX1 |
0.49 |
S100A16 |
140576 |
Q96FQ6 |
0.49 |
TMEM17 |
200728 |
Q86X19 |
0.49 |
ADRB2 |
154 |
P07550 |
0.63 |
ATP4A |
495 |
P20648 |
0.63 |
ELAVL1 |
1994 |
Q15717 |
0.63 |
ESR2 |
2100 |
Q92731 |
0.63 |
MCM2 |
4171 |
P49736 |
0.63 |
MDM2 |
4193 |
Q00987 |
0.63 |
RNF2 |
6045 |
Q99496 |
0.63 |
RPA1 |
6117 |
P27694 |
0.63 |
RPA2 |
6118 |
P15927 |
0.63 |
RPA3 |
6119 |
P35244 |
0.63 |
SUMO2 |
6613 |
P61956 |
0.63 |
VCP |
7415 |
P55072 |
0.63 |
VHL |
7428 |
P40337 |
0.63 |
UBL4A |
8266 |
P11441 |
0.63 |
IKBKE |
9641 |
Q14164 |
0.63 |
CUL7 |
9820 |
Q14999 |
0.63 |
OBSL1 |
23363 |
O75147 |
0.63 |
B3GAT3 |
26229 |
O94766 |
0.63 |
DERL1 |
79139 |
Q9BUN8 |
0.63 |
CCDC8 |
83987 |
Q9H0W5 |
0.63 |
UBAC2 |
337867 |
Q8NBM4 |
0.63 |
FN1 |
2335 |
P02751 |
0.72 |
ATP6AP2 |
10159 |
O75787 |
0.72 |
ATL3 |
25923 |
Q6DD88 |
0.72 |
GOLT1B |
51026 |
Q9Y3E0 |
0.72 |
CENPO |
79172 |
Q9BU64 |
0.72 |
GOSR1 |
9527 |
O95249 |
0.79 |
ESR1 |
2099 |
P03372 |
0.82 |
STX18 |
53407 |
Q9P2W9 |
0.89 |