Protein Description

Gene Symbol PDLIM7
Entrez ID 9260
Uniprot ID Q9NR12
Description PDZ and LIM domain 7
Chromosomal Location chr5: 177,483,394-177,497,606
Ontology GO ID GO Term Definition Evidence

BP

GO:0001503

ossification

The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance.

IEA

BP

GO:0006898

receptor-mediated endocytosis

An endocytosis process in which cell surface receptors ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles.

TAS

BP

GO:0007275

multicellular organism development

The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

IEA

BP

GO:0030036

actin cytoskeleton organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.

IEA

BP

GO:0030154

cell differentiation

The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.

IEA

BP

GO:0045669

positive regulation of osteoblast differentiation

Any process that activates or increases the frequency, rate or extent of osteoblast differentiation.

IEA

CC

GO:0001725

stress fiber

A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.

IEA

CC

GO:0001726

ruffle

Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork.

IEA

CC

GO:0005634

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

IDA

CC

GO:0005737

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

IEA

CC

GO:0005911

cell-cell junction

A cell junction that forms a connection between two or more cells in a multicellular organism; excludes direct cytoplasmic junctions such as ring canals.

IDA

CC

GO:0005925

focal adhesion

Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.

IDA

CC

GO:0015629

actin cytoskeleton

The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.

IDA

MF

GO:0005515

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

IPI

MF

GO:0008270

zinc ion binding

Interacting selectively and non-covalently with zinc (Zn) ions.

IEA

Domain ID Description

IPR001478

PDZ domain

IPR001781

Zinc finger, LIM-type

Pathway ID Pathway Term Pathway Source

WP262

EBV LMP1 signaling

WikiPathways

No diseases found.

No tissues found.

No databases found.

Pubmed ID Author Year Title

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

22951915

Haozi et al.

2012

Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome

Gene Symbol Entrez ID Uniprot ID Score

SMAD1

4086

Q15797

0.52

PRKCA

5578

P17252

0.62

HBB

3043

P68871

0.63

HOXA1

3198

P49639

0.63

PRKCB

5579

P05771

0.63

PRKCZ

5590

Q05513

0.63

SH3BP2

6452

P78314

0.63

TPM1

7168

P09493

0.63

NR2C2

7182

P49116

0.63

TRAF2

7186

Q12933

0.63

TRAF3

7187

Q13114

0.63

TRAF6

7189

Q9Y4K3

0.63

YES1

7525

P07947

0.63

TRADD

8717

Q15628

0.63

TAB2

23118

Q9NYJ8

0.63

TP53

7157

P04637

0.68

COPS5

10987

Q92905

0.68

ACTG1

71

P63261

0.72

ACTN4

81

O43707

0.72

ACTN1

87

P12814

0.72

AP2A1

160

O95782

0.72

ATP6V1A

523

P38606

0.72

CALM2

805

P62158

0.72

CALM3

808

P62158

0.72

CALML3

810

P27482

0.72

CAPZA2

830

P47755

0.72

CAPZB

832

P47756

0.72

AP2M1

1173

Q96CW1

0.72

CLTA

1211

P09496

0.72

CLTB

1212

P09497

0.72

CLTC

1213

Q00610

0.72

CPM

1368

P14384

0.72

EPS15

2060

P42566

0.72

FLNA

2316

P21333

0.72

GNAI2

2771

P04899

0.72

GNB1

2782

P62873

0.72

ABLIM1

3983

O14639

0.72

MYO1B

4430

O43795

0.72

MYH9

4627

P35579

0.72

MYL6

4637

P60660

0.72

MYO1E

4643

Q12965

0.72

MYO5A

4644

Q9Y4I1

0.72

PLEC

5339

Q15149

0.72

SOAT1

6646

P35610

0.72

SORD

6652

Q00796

0.72

SPTAN1

6709

Q13813

0.72

SPTBN1

6711

Q01082

0.72

SVIL

6840

O95425

0.72

TCEB2

6923

Q15370

0.72

TMOD1

7111

P28289

0.72

TPM3

7170

P06753

0.72

TPM4

7171

P67936

0.72

VARS

7407

P26640

0.72

LUZP1

7798

Q86V48

0.72

ARPC4

10093

P59998

0.72

ARPC3

10094

O15145

0.72

ACTR3

10096

P61158

0.72

ARPC2

10109

O15144

0.72

MYL12A

10627

P19105

0.72

AKAP2

11217

Q9Y2D5

0.72

SYNPO

11346

Q8N3V7

0.72

CEP162

22832

Q5TB80

0.72

PALLD

23022

Q8WX93

0.72

MPRIP

23164

Q6WCQ1

0.72

COBL

23242

O75128

0.72

SPECC1L

23384

Q69YQ0

0.72

RAI14

26064

Q9P0K7

0.72

REPIN1

29803

Q9BWE0

0.72

BMP2K

55589

Q9NSY1

0.72

MYO5C

55930

Q9NQX4

0.72

QSER1

79832

Q2KHR3

0.72

ARPC5L

81873

Q9BPX5

0.72

MISP

126353

Q8IVT2

0.72

ACTRT1

139741

Q8TDG2

0.72

MYL6B

140465

P14649

0.72

TPRN

286262

Q4KMQ1

0.72

AP5B1

91056

Q2VPB7

0.73

GEM

2669

P55040

0.73

PSMF1

9491

Q92530

0.73

C20orf195

79025

Q9BVV2

0.73

ENKD1

84080

Q9H0I2

0.73

UBQLN4

56893

Q9NRR5

0.75

RET

5979

P07949

0.83

ZMYND11

10771

Q15326

0.83

SMURF1

57154

Q9HCE7

0.87

NDUFA7

4701

O95182

0.49

NINL

22981

Q9Y2I6

0.49

CEP128

145508

Q6ZU80

0.49

GRB2

2885

P62993

0.56

PARP1

142

P09874

0.63

CDC5L

988

Q99459

0.63

HNRNPD

3184

Q14103

0.63

NEDD4

4734

P46934

0.63

PCBP1

5093

Q15365

0.63

PHF1

5252

O43189

0.63

SHMT2

6472

P34897

0.63

TRIP6

7205

Q15654

0.63

TSG101

7251

Q99816

0.63

XPO1

7514

O14980

0.63

DGCR6

8214

Q14129

0.63

IQGAP1

8826

P46940

0.63

FHL5

9457

Q5TD97

0.63

NXF1

10482

Q9UBU9

0.63

SNW1

22938

Q13573

0.63

SYT11

23208

Q9BT88

0.63

FBXW11

23291

Q9UKB1

0.63

OBSL1

23363

O75147

0.63

LUZP4

51213

Q9P127

0.63

ETV7

51513

Q9Y603

0.63

ZCCHC7

84186

Q8N3Z6

0.63

SH2B2

10603

O14492

0.65

MDM2

4193

Q00987

0.68

MYC

4609

P01106

0.72

MYO1C

4641

O00159

0.72

YAP1

10413

P46937

0.72

CBLC

23624

Q9ULV8

0.72

BSG

682

P35613

0.73

GFAP

2670

P14136

0.73

SPP1

6696

P10451

0.73

UBE2I

7329

P63279

0.73

ZNF165

7718

P49910

0.73

PRKD2

25865

Q9BZL6

0.73

PAK7

57144

Q9P286

0.73

CCDC185

164127

Q8N715

0.73

WWP2

11060

O00308

0.74

BAG3

9531

O95817

0.82

TPM2

7169

P07951

0.90