Gene Symbol | EIF3B |
Entrez ID | 8662 |
Uniprot ID | P55884 |
Description | eukaryotic translation initiation factor 3 subunit B |
Chromosomal Location | chr7: 2,354,086-2,380,745 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0001731 |
formation of translation preinitiation complex |
The joining of the small ribosomal subunit, ternary complex, and mRNA. |
IEA |
BP |
GO:0006413 |
translational initiation |
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA. |
IC|IDA|TAS |
BP |
GO:0006446 |
regulation of translational initiation |
Any process that modulates the frequency, rate or extent of translational initiation. |
IDA |
BP |
GO:0075522 |
IRES-dependent viral translational initiation |
Process by which viral mRNA translation is initiated, where a domain in the 5' untranslated region (UTR) of the viral mRNA called an internal ribosome entry site (IRES) binds the host 43S preinitiation complex, circumventing regular cap-dependent translation initiation. |
IDA |
BP |
GO:0075525 |
viral translational termination-reinitiation |
A process which occurs as part of viral mRNA translation which allows expression of a downstream open reading frame (ORF) in a dicistronic mRNA. In this process, ribosomes translate the upstream ORF but following termination, a proportion of 40S subunits remain tethered to the mRNA and go on to re-initiate translation at the start codon of the downstream ORF. |
IDA |
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
IDA |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
TAS |
CC |
GO:0005852 |
eukaryotic translation initiation factor 3 complex |
A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex. The eIF3 complex contains five conserved core subunits, and may contain several additional proteins; the non-core subunits are thought to mediate association of the complex with specific sets of mRNAs. |
IDA |
CC |
GO:0016282 |
eukaryotic 43S preinitiation complex |
A protein complex composed of the 40S ribosomal subunit plus eIF1A, eIF3, and eIF2-GTP-bound methionyl-initiator methionine tRNA. |
IEA |
CC |
GO:0033290 |
eukaryotic 48S preinitiation complex |
A protein complex composed of the small ribosomal subunit, eIF3, eIF1A, methionyl-initiatior methionine and a capped mRNA. The complex is initially positioned at the 5'-end of the capped mRNA. |
IEA |
CC |
GO:0070062 |
extracellular exosome |
A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
IDA |
CC |
GO:0071541 |
eukaryotic translation initiation factor 3 complex, eIF3m |
An eukaryotic translation initiation factor 3 complex that contains the PCI-domain protein eIF3m. |
IEA |
MF |
GO:0000166 |
nucleotide binding |
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
IEA |
MF |
GO:0003743 |
translation initiation factor activity |
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. |
IC|IDA |
MF |
GO:0005515 |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IPI |
MF |
GO:0031369 |
translation initiation factor binding |
Interacting selectively and non-covalently with a translation initiation factor, any polypeptide factor involved in the initiation of ribosome-mediated translation. |
IEA |
MF |
GO:0032947 |
protein complex scaffold |
Functions to provide a physical support for the assembly of a multiprotein complex. |
TAS |
Domain ID | Description |
---|---|
IPR000504 |
RNA recognition motif domain |
IPR011400 |
Eukaryotic translation initiation factor 3 subunit B |
IPR013979 |
Translation initiation factor, beta propellor-like domain |
IPR015943 |
WD40/YVTN repeat-like-containing domain |
IPR034363 |
eIF3B, RNA recognition motif |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa03013 |
RNA transport |
KEGG |
WP107 |
Translation Factors |
WikiPathways |
UMLS CUI | UMLS Term |
---|---|
C0019693 |
HIV Infections |
Tissue | Cell Type |
---|---|
adrenal gland |
glandular cells |
appendix |
glandular cells |
appendix |
lymphoid tissue |
bronchus |
respiratory epithelial cells |
cerebellum |
Purkinje cells |
cervix, uterine |
squamous epithelial cells |
colon |
glandular cells |
duodenum |
glandular cells |
endometrium |
glandular cells |
epididymis |
glandular cells |
esophagus |
squamous epithelial cells |
gallbladder |
glandular cells |
kidney |
cells in tubules |
nasopharynx |
respiratory epithelial cells |
oral mucosa |
squamous epithelial cells |
pancreas |
exocrine glandular cells |
pancreas |
islets of Langerhans |
parathyroid gland |
glandular cells |
rectum |
glandular cells |
skin |
fibroblasts |
skin |
keratinocytes |
skin |
epidermal cells |
small intestine |
glandular cells |
soft tissue |
chondrocytes |
stomach |
glandular cells |
testis |
cells in seminiferous ducts |
testis |
Leydig cells |
thyroid gland |
glandular cells |
tonsil |
germinal center cells |
tonsil |
squamous epithelial cells |
urinary bladder |
urothelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
ATP6V0D1 |
9114 |
P61421 |
0.49 |
ATL3 |
25923 |
Q6DD88 |
0.49 |
RPLP0P6 |
220717 |
Q8NHW5 |
0.49 |
IL2RB |
3560 |
P14784 |
0.52 |
UPF2 |
26019 |
Q9HAU5 |
0.63 |
EIF5 |
1983 |
P55010 |
0.65 |
EIF4B |
1975 |
P23588 |
0.72 |
NCBP1 |
4686 |
Q09161 |
0.76 |
RPS6 |
6194 |
P62753 |
0.81 |
EIF4A1 |
1973 |
P60842 |
0.82 |
RPTOR |
57521 |
Q8N122 |
0.82 |
MTOR |
2475 |
P42345 |
0.83 |
EIF3M |
10480 |
Q7L2H7 |
0.83 |
EIF3L |
51386 |
Q9Y262 |
0.83 |
RPS6KB1 |
6198 |
P23443 |
0.88 |
EIF3J |
8669 |
O75822 |
0.88 |
EIF3D |
8664 |
O15371 |
0.89 |
EIF4E |
1977 |
P06730 |
0.93 |
EIF4G1 |
1981 |
Q04637 |
0.94 |
EIF3E |
3646 |
P60228 |
0.94 |
EIF3C |
8663 |
Q99613 |
0.94 |
EIF3I |
8668 |
Q13347 |
0.98 |
EIF3A |
8661 |
Q14152 |
0.99 |
EIF3G |
8666 |
O75821 |
0.99 |
ATP1A1 |
476 |
P05023 |
0.49 |
MSH2 |
4436 |
P43246 |
0.49 |
VAPA |
9218 |
Q9P0L0 |
0.49 |
MRPL40 |
64976 |
Q9NQ50 |
0.49 |
EIF3CL |
728689 |
B5ME19 |
0.49 |
ACTB |
60 |
P60709 |
0.55 |
EIF6 |
3692 |
P56537 |
0.62 |
BRCA1 |
672 |
P38398 |
0.63 |
CD4 |
920 |
P01730 |
0.63 |
CD81 |
975 |
P60033 |
0.63 |
CDC5L |
988 |
Q99459 |
0.63 |
CSNK1E |
1454 |
P49674 |
0.63 |
DYNC1I2 |
1781 |
Q13409 |
0.63 |
ESR1 |
2099 |
P03372 |
0.63 |
ICAM1 |
3383 |
P05362 |
0.63 |
ITGA4 |
3676 |
P13612 |
0.63 |
JUN |
3725 |
P05412 |
0.63 |
MCM2 |
4171 |
P49736 |
0.63 |
MCM4 |
4173 |
P33991 |
0.63 |
MDM2 |
4193 |
Q00987 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
RAD21 |
5885 |
O60216 |
0.63 |
RNF2 |
6045 |
Q99496 |
0.63 |
RPS6KB2 |
6199 |
Q9UBS0 |
0.63 |
SUMO2 |
6613 |
P61956 |
0.63 |
STAU1 |
6780 |
O95793 |
0.63 |
STK4 |
6789 |
Q13043 |
0.63 |
TADA2A |
6871 |
O75478 |
0.63 |
UVRAG |
7405 |
Q9P2Y5 |
0.63 |
GAN |
8139 |
Q9H2C0 |
0.63 |
EIF4G3 |
8672 |
O43432 |
0.63 |
EED |
8726 |
O75530 |
0.63 |
HERC2 |
8924 |
O95714 |
0.63 |
KIAA0101 |
9768 |
Q15004 |
0.63 |
PAN2 |
9924 |
Q504Q3 |
0.63 |
HDAC5 |
10014 |
Q9UQL6 |
0.63 |
AHSA1 |
10598 |
O95433 |
0.63 |
CDC37 |
11140 |
Q16543 |
0.63 |
LARP1 |
23367 |
Q6PKG0 |
0.63 |
TARDBP |
23435 |
Q13148 |
0.63 |
SRRM2 |
23524 |
Q9UQ35 |
0.63 |
FBXO6 |
26270 |
Q9NRD1 |
0.63 |
SMURF1 |
57154 |
Q9HCE7 |
0.63 |
CCDC8 |
83987 |
Q9H0W5 |
0.63 |
IGSF8 |
93185 |
Q969P0 |
0.63 |
RSPH9 |
221421 |
Q9H1X1 |
0.63 |
PAIP1 |
10605 |
Q9H074 |
0.68 |
FN1 |
2335 |
P02751 |
0.72 |
MYO1C |
4641 |
O00159 |
0.72 |
UPF1 |
5976 |
Q92900 |
0.72 |
RIOK2 |
55781 |
Q9BVS4 |
0.72 |
DDX3X |
1654 |
O00571 |
0.76 |
USP3 |
9960 |
Q9Y6I4 |
0.76 |
CSNK2A2 |
1459 |
P19784 |
0.79 |
VCAM1 |
7412 |
P19320 |
0.82 |
EIF3K |
27335 |
Q9UBQ5 |
0.94 |
EIF3F |
8665 |
O00303 |
0.96 |
EIF3H |
8667 |
O15372 |
0.96 |