Gene Symbol | PDXK |
Entrez ID | 8566 |
Uniprot ID | O00764 |
Description | pyridoxal (pyridoxine, vitamin B6) kinase |
Chromosomal Location | chr21: 43,719,094-43,762,307 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0008283 |
cell proliferation |
The multiplication or reproduction of cells, resulting in the expansion of a cell population. |
IDA |
BP |
GO:0009443 |
pyridoxal 5'-phosphate salvage |
Any process that generates pyridoxal 5'-phosphate, the active form of vitamin B6, from derivatives of it without de novo synthesis. |
IBA |
BP |
GO:0016310 |
phosphorylation |
The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide. |
IEA |
BP |
GO:0042816 |
vitamin B6 metabolic process |
The chemical reactions and pathways involving any of the vitamin B6 compounds: pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate. |
IBA|IC|TAS |
BP |
GO:0042823 |
pyridoxal phosphate biosynthetic process |
The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6. |
IDA |
CC |
GO:0005634 |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
IDA |
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
IDA |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
IDA|TAS |
CC |
GO:0070062 |
extracellular exosome |
A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
IDA |
MF |
GO:0000287 |
magnesium ion binding |
Interacting selectively and non-covalently with magnesium (Mg) ions. |
IDA |
MF |
GO:0005524 |
ATP binding |
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
IDA |
MF |
GO:0008270 |
zinc ion binding |
Interacting selectively and non-covalently with zinc (Zn) ions. |
IDA |
MF |
GO:0008478 |
pyridoxal kinase activity |
Catalysis of the reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate. |
IDA|TAS |
MF |
GO:0030170 |
pyridoxal phosphate binding |
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
IDA |
MF |
GO:0030955 |
potassium ion binding |
Interacting selectively and non-covalently with potassium (K+) ions. |
IDA |
MF |
GO:0031402 |
sodium ion binding |
Interacting selectively and non-covalently with sodium ions (Na+). |
IDA |
MF |
GO:0031403 |
lithium ion binding |
Interacting selectively and non-covalently with lithium ions (Li+). |
IDA |
MF |
GO:0042803 |
protein homodimerization activity |
Interacting selectively and non-covalently with an identical protein to form a homodimer. |
IDA |
Domain ID | Description |
---|---|
IPR004625 |
Pyridoxine kinase |
IPR013749 |
Pyridoxamine kinase/Phosphomethylpyrimidine kinase |
IPR029056 |
Ribokinase-like |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa00750 |
Vitamin B6 metabolism |
KEGG |
hsa01100 |
Metabolic pathways |
KEGG |
UMLS CUI | UMLS Term |
---|---|
C0038220 |
Status Epilepticus |
Tissue | Cell Type |
---|---|
cerebral cortex |
glial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
ABAT |
18 |
P80404 |
0.49 |
RABIF |
5877 |
P47224 |
0.49 |
TPI1 |
7167 |
P60174 |
0.49 |
OGT |
8473 |
O15294 |
0.49 |
EIF4E |
1977 |
P06730 |
0.49 |
G6PD |
2539 |
P11413 |
0.49 |
ITPA |
3704 |
Q9BY32 |
0.49 |
MDH1 |
4190 |
P40925 |
0.49 |
OAT |
4942 |
P04181 |
0.49 |
SNX2 |
6643 |
O60749 |
0.49 |
SOD1 |
6647 |
P00441 |
0.49 |
EZR |
7430 |
P15311 |
0.49 |
HIBADH |
11112 |
P31937 |
0.49 |
HYI |
81888 |
Q5T013 |
0.49 |
BARD1 |
580 |
Q99728 |
0.63 |
ELAVL1 |
1994 |
Q15717 |
0.63 |
MOV10 |
4343 |
Q9HCE1 |
0.63 |
NEDD8 |
4738 |
Q15843 |
0.63 |
PRKAB1 |
5564 |
Q9Y478 |
0.63 |
SUMO1 |
7341 |
P63165 |
0.63 |
CUL3 |
8452 |
Q13618 |
0.63 |
CUL1 |
8454 |
Q13616 |
0.63 |
IKBKE |
9641 |
Q14164 |
0.63 |
KIAA0101 |
9768 |
Q15004 |
0.63 |
NXF1 |
10482 |
Q9UBU9 |
0.63 |
COPS5 |
10987 |
Q92905 |
0.63 |
GABARAP |
11337 |
O95166 |
0.63 |
GABARAPL2 |
11345 |
P60520 |
0.63 |
CAND1 |
55832 |
Q86VP6 |
0.63 |
MAP1LC3B |
81631 |
Q9GZQ8 |
0.63 |
MAP1LC3A |
84557 |
Q9H492 |
0.63 |
YWHAZ |
7534 |
P63104 |
0.68 |
YWHAQ |
10971 |
P27348 |
0.68 |