Protein Description

Gene Symbol RAD54L
Entrez ID 8438
Uniprot ID Q92698
Description RAD54-like (S. cerevisiae)
Chromosomal Location chr1: 46,247,688-46,278,473
Ontology GO ID GO Term Definition Evidence

BP

GO:0000724

double-strand break repair via homologous recombination

The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.

IEA

BP

GO:0000733

DNA strand renaturation

The identification and annealing of complementary base pairs in single-strand DNA.

IEA

BP

GO:0006281

DNA repair

The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.

TAS

BP

GO:0006310

DNA recombination

Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.

TAS

BP

GO:0007126

meiotic nuclear division

One of the two nuclear divisions that occur as part of the meiotic cell cycle.

TAS

BP

GO:0008340

determination of adult lifespan

The control of viability and duration in the adult phase of the life-cycle.

IEA

BP

GO:0010212

response to ionizing radiation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.

IEA

BP

GO:0042493

response to drug

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.

IEA

BP

GO:0051276

chromosome organization

A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. This term covers covalent modifications at the molecular level as well as spatial relationships among the major components of a chromosome.

IEA

CC

GO:0005634

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

TAS

CC

GO:0005654

nucleoplasm

That part of the nuclear content other than the chromosomes or the nucleolus.

IDA

MF

GO:0003677

DNA binding

Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

IEA

MF

GO:0004386

helicase activity

Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.

IEA

MF

GO:0005524

ATP binding

Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

IEA

MF

GO:0036310

annealing helicase activity

Catalysis of the ATP-dependent rewinding of single-stranded DNA (ssDNA) to reform base pairs between strands. Often acts on ssDNA bubbles bound by replication protein A (RPA).

IDA

Domain ID Description

IPR000330

SNF2-related, N-terminal domain

IPR001650

Helicase, C-terminal

IPR014001

Helicase superfamily 1/2, ATP-binding domain

IPR027417

P-loop containing nucleoside triphosphate hydrolase

Pathway ID Pathway Term Pathway Source

hsa03440

Homologous recombination

KEGG

WP1984

Integrated Breast Cancer Pathway

WikiPathways

UMLS CUI UMLS Term

C0024305

Lymphoma, Non-Hodgkin

C1458155

Mammary Neoplasms

Tissue Cell Type

bronchus

respiratory epithelial cells

colon

glandular cells

epididymis

glandular cells

fallopian tube

glandular cells

gallbladder

glandular cells

nasopharynx

respiratory epithelial cells

placenta

decidual cells

placenta

trophoblastic cells

rectum

glandular cells

stomach

glandular cells

thyroid gland

glandular cells

urinary bladder

urothelial cells

No databases found.

Pubmed ID Author Year Title

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

Gene Symbol Entrez ID Uniprot ID Score

WDYHV1

55093

Q96HA8

0.63

RAD51

5888

Q06609

0.64

E2F4

1874

Q16254

0.52

HECW2

57520

Q9P2P5

0.63

LIMK1

3984

P53667

0.72

NCK1

4690

P16333

0.72

BAG6

7917

P46379

0.72

SGTB

54557

Q96EQ0

0.72

TNKS2

80351

Q9H2K2

0.77