Gene Symbol | TNFSF4 |
Entrez ID | 7292 |
Uniprot ID | P23510 |
Description | tumor necrosis factor superfamily member 4 |
Chromosomal Location | chr1: 173,183,734-173,207,313 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0002215 |
defense response to nematode |
A response to protect an organism from a directly detected or perceived external threat from a nematode or nematodes, which results in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. |
ISS |
BP |
GO:0002526 |
acute inflammatory response |
Inflammation which comprises a rapid, short-lived, relatively uniform response to acute injury or antigenic challenge and is characterized by accumulations of fluid, plasma proteins, and granulocytic leukocytes. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response. |
ISS |
BP |
GO:0002726 |
positive regulation of T cell cytokine production |
Any process that activates or increases the frequency, rate, or extent of T cell cytokine production. |
ISS |
BP |
GO:0002819 |
regulation of adaptive immune response |
Any process that modulates the frequency, rate, or extent of an adaptive immune response. |
ISS |
BP |
GO:0002830 |
positive regulation of type 2 immune response |
Any process that activates or increases the frequency, rate, or extent of a type 2 immune response. |
ISS |
BP |
GO:0002891 |
positive regulation of immunoglobulin mediated immune response |
Any process that activates or increases the frequency, rate, or extent of an immunoglobulin mediated immune response. |
ISS |
BP |
GO:0006955 |
immune response |
Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. |
IEA |
BP |
GO:0007165 |
signal transduction |
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
TAS |
BP |
GO:0008203 |
cholesterol metabolic process |
The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues. |
IEA |
BP |
GO:0008284 |
positive regulation of cell proliferation |
Any process that activates or increases the rate or extent of cell proliferation. |
TAS |
BP |
GO:0009615 |
response to virus |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus. |
ISS |
BP |
GO:0032689 |
negative regulation of interferon-gamma production |
Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon. |
ISS |
BP |
GO:0032700 |
negative regulation of interleukin-17 production |
Any process that stops, prevents, or reduces the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines. |
IDA |
BP |
GO:0032729 |
positive regulation of interferon-gamma production |
Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon. |
IDA |
BP |
GO:0032733 |
positive regulation of interleukin-10 production |
Any process that activates or increases the frequency, rate, or extent of interleukin-10 production. |
ISS |
BP |
GO:0032735 |
positive regulation of interleukin-12 production |
Any process that activates or increases the frequency, rate, or extent of interleukin-12 production. |
ISS |
BP |
GO:0032736 |
positive regulation of interleukin-13 production |
Any process that activates or increases the frequency, rate, or extent of interleukin-13 production. |
ISS |
BP |
GO:0032743 |
positive regulation of interleukin-2 production |
Any process that activates or increases the frequency, rate, or extent of interleukin-2 production. |
IEA |
BP |
GO:0032753 |
positive regulation of interleukin-4 production |
Any process that activates or increases the frequency, rate, or extent of interleukin-4 production. |
IDA |
BP |
GO:0032755 |
positive regulation of interleukin-6 production |
Any process that activates or increases the frequency, rate, or extent of interleukin-6 production. |
IDA |
BP |
GO:0033209 |
tumor necrosis factor-mediated signaling pathway |
A series of molecular signals initiated by the binding of a tumor necrosis factor to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription. |
TAS |
BP |
GO:0035709 |
memory T cell activation |
The change in morphology and behavior of a memory T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific. |
ISS |
BP |
GO:0035712 |
T-helper 2 cell activation |
The change in morphology and behavior of a T helper 2 cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific. |
ISS |
BP |
GO:0035713 |
response to nitrogen dioxide |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen dioxide (NO2) stimulus. |
ISS |
BP |
GO:0035714 |
cellular response to nitrogen dioxide |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen dioxide (NO2) stimulus. |
IEA |
BP |
GO:0035783 |
CD4-positive, alpha-beta T cell costimulation |
The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment CD4-positive, alpha-beta T cell activation. |
IEA |
BP |
GO:0042098 |
T cell proliferation |
The expansion of a T cell population by cell division. Follows T cell activation. |
IEA |
BP |
GO:0042102 |
positive regulation of T cell proliferation |
Any process that activates or increases the rate or extent of T cell proliferation. |
IBA |
BP |
GO:0042104 |
positive regulation of activated T cell proliferation |
Any process that activates or increases the rate or extent of activated T cell proliferation. |
IEA |
BP |
GO:0043372 |
positive regulation of CD4-positive, alpha-beta T cell differentiation |
Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell differentiation. |
ISS |
BP |
GO:0043382 |
positive regulation of memory T cell differentiation |
Any process that activates or increases the frequency, rate or extent of memory T cell differentiation. |
ISS |
BP |
GO:0043433 |
negative regulation of sequence-specific DNA binding transcription factor activity |
Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription. |
ISS |
BP |
GO:0045590 |
negative regulation of regulatory T cell differentiation |
Any process that stops, prevents, or reduces the rate of differentiation of regulatory T cells. |
ISS |
BP |
GO:0045626 |
negative regulation of T-helper 1 cell differentiation |
Any process that stops, prevents, or reduces the frequency, rate or extent of T-helper 1 cell differentiation. |
ISS |
BP |
GO:0045630 |
positive regulation of T-helper 2 cell differentiation |
Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation. |
ISS |
BP |
GO:0045892 |
negative regulation of transcription, DNA-templated |
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
ISS |
BP |
GO:0046641 |
positive regulation of alpha-beta T cell proliferation |
Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation. |
ISS |
BP |
GO:0050710 |
negative regulation of cytokine secretion |
Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of cytokines from a cell. |
IEA |
BP |
GO:0050727 |
regulation of inflammatory response |
Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. |
ISS |
BP |
GO:0050729 |
positive regulation of inflammatory response |
Any process that activates or increases the frequency, rate or extent of the inflammatory response. |
IDA |
BP |
GO:0050871 |
positive regulation of B cell activation |
Any process that activates or increases the frequency, rate or extent of B cell activation. |
ISS |
BP |
GO:0051024 |
positive regulation of immunoglobulin secretion |
Any process that activates or increases the frequency, rate or extent of the regulated release of immunoglobulins from a cell. |
ISS |
BP |
GO:0071222 |
cellular response to lipopolysaccharide |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria. |
IDA |
BP |
GO:0071380 |
cellular response to prostaglandin E stimulus |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus. |
IDA |
BP |
GO:0071954 |
chemokine (C-C motif) ligand 11 production |
The appearance of chemokine (C-C motif) ligand 11 (CCL11, also known as eotaxin-1) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. |
ISS |
BP |
GO:1900281 |
positive regulation of CD4-positive, alpha-beta T cell costimulation |
Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell costimulation. |
ISS |
BP |
GO:2000568 |
positive regulation of memory T cell activation |
Any process that activates or increases the frequency, rate or extent of memory T cell activation. |
IEA |
BP |
GO:2000570 |
positive regulation of T-helper 2 cell activation |
Any process that activates or increases the frequency, rate or extent of T-helper 2 cell activation. |
IEA |
BP |
GO:2000572 |
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes |
Any process that activates or increases the frequency, rate or extent of interleukin-4-dependent isotype switching to IgE isotypes. |
ISS |
CC |
GO:0005615 |
extracellular space |
That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
IDA |
CC |
GO:0005886 |
plasma membrane |
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
TAS |
CC |
GO:0005887 |
integral component of plasma membrane |
The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
NAS |
CC |
GO:0009986 |
cell surface |
The external part of the cell wall and/or plasma membrane. |
IDA |
MF |
GO:0005102 |
receptor binding |
Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
TAS |
MF |
GO:0005125 |
cytokine activity |
Functions to control the survival, growth, differentiation and effector function of tissues and cells. |
IEA |
MF |
GO:0005164 |
tumor necrosis factor receptor binding |
Interacting selectively and non-covalently with the tumor necrosis factor receptor. |
IEA |
MF |
GO:0032813 |
tumor necrosis factor receptor superfamily binding |
Interacting selectively and non-covalently with any member of the tumor necrosis factor receptor superfamily. |
IBA|ISS |
Domain ID | Description |
---|---|
IPR006052 |
Tumour necrosis factor domain |
IPR008983 |
Tumour necrosis factor-like domain |
IPR021184 |
Tumour necrosis factor, conserved site |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa04060 |
Cytokine-cytokine receptor interaction |
KEGG |
h_ox40Pathway |
OX40 Signaling Pathway |
BioCarta |
UMLS CUI | UMLS Term |
---|---|
C0024141 |
Lupus Erythematosus, Systemic |
C0027051 |
Myocardial Infarction |
C0027404 |
Narcolepsy |
C0751362 |
Narcolepsy-Cataplexy Syndrome |
Tissue | Cell Type |
---|---|
appendix |
glandular cells |
colon |
glandular cells |
duodenum |
glandular cells |
esophagus |
squamous epithelial cells |
heart muscle |
myocytes |
oral mucosa |
squamous epithelial cells |
rectum |
glandular cells |
salivary gland |
glandular cells |
skin |
epidermal cells |
small intestine |
glandular cells |
smooth muscle |
smooth muscle cells |
testis |
cells in seminiferous ducts |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
TRAF2 |
7186 |
Q12933 |
0.73 |
TNFRSF4 |
7293 |
P43489 |
0.88 |