Protein Description

Gene Symbol TMOD1
Entrez ID 7111
Uniprot ID P28289
Description tropomodulin 1
Chromosomal Location chr9: 97,501,180-97,601,748
Ontology GO ID GO Term Definition Evidence

BP

GO:0006936

muscle contraction

A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis.

IBA

BP

GO:0007015

actin filament organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.

IBA

BP

GO:0008344

adult locomotory behavior

Locomotory behavior in a fully developed and mature organism.

IEA

BP

GO:0030049

muscle filament sliding

The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated.

TAS

BP

GO:0030239

myofibril assembly

Formation of myofibrils, the repeating units of striated muscle.

IBA

BP

GO:0051694

pointed-end actin filament capping

The binding of a protein or protein complex to the pointed (or minus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.

IEA

BP

GO:0070307

lens fiber cell development

The process whose specific outcome is the progression of a lens fiber cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a lens fiber cell fate. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.

IEA

CC

GO:0005829

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

TAS

CC

GO:0005865

striated muscle thin filament

Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils.

IBA

CC

GO:0005884

actin filament

A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.

IDA

CC

GO:0008180

COP9 signalosome

A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome.

IDA

CC

GO:0016020

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

IEA

CC

GO:0030016

myofibril

The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.

IDA

CC

GO:0030017

sarcomere

The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.

IDA

CC

GO:0030863

cortical cytoskeleton

The portion of the cytoskeleton that lies just beneath the plasma membrane.

IEA

MF

GO:0003779

actin binding

Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.

IDA

MF

GO:0005523

tropomyosin binding

Interacting selectively and non-covalently with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle.

IBA

MF

GO:0051015

actin filament binding

Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.

IEA

Domain ID Description

IPR004934

Tropomodulin

IPR030135

Tropomodulin-1

IPR032675

Leucine-rich repeat domain, L domain-like

Pathway ID Pathway Term Pathway Source

WP383

Striated Muscle Contraction

WikiPathways

UMLS CUI UMLS Term

C0029927

Ovarian Cysts

C0033578

Prostatic Neoplasms

Tissue Cell Type

heart muscle

myocytes

No databases found.

Pubmed ID Author Year Title

15308691

Jansen et al.

2004

Abnormal Gene Expression Profiles in Human Ovaries from Polycystic Ovary Syndrome Patients

Gene Symbol Entrez ID Uniprot ID Score

TLR2

7097

O60603

0.49

WARS

7453

P23381

0.49

FBXW7

55294

Q969H0

0.49

TPM3

7170

P06753

0.52

FLII

2314

Q13045

0.63

GSN

2934

P06396

0.63

MYO5B

4645

Q9ULV0

0.63

SNX1

6642

Q13596

0.63

LRRFIP1

9208

Q32MZ4

0.63

LRRFIP2

9209

Q9Y608

0.63

TBC1D4

9882

O60343

0.63

AGTPBP1

23287

Q9UPW5

0.63

NIN

51199

Q8N4C6

0.63

SCIN

85477

Q9Y6U3

0.63

NEB

4703

P20929

0.76

MYO5C

55930

Q9NQX4

0.82

APC

324

P25054

0.49

BUB1

699

O43683

0.49

CDH1

999

P12830

0.49

CDKN2A

1029

Q8N726

0.49

DCC

1630

P43146

0.49

ODC1

4953

P11926

0.49

PIK3CA

5290

P42336

0.49

DLC1

10395

Q96QB1

0.49

MLH3

27030

Q9UHC1

0.49

EFHD2

79180

Q96C19

0.49

NTRK1

4914

P04629

0.63

PRKAA2

5563

P54646

0.63

PAN2

9924

Q504Q3

0.63

COPS5

10987

Q92905

0.63

TMSB10

9168

P63313

0.67

ADD1

118

P35611

0.72

CAPZA2

830

P47755

0.72

CDK2

1017

P24941

0.72

DBN1

1627

Q16643

0.72

FLNA

2316

P21333

0.72

MYH9

4627

P35579

0.72

MYO1C

4641

O00159

0.72

PPP1CB

5500

P62140

0.72

IQGAP1

8826

P46940

0.72

PDLIM7

9260

Q9NR12

0.72

SYNPO

11346

Q8N3V7

0.72

MAPRE1

22919

Q15691

0.72

LIMA1

51474

Q9UHB6

0.72

ANLN

54443

Q9NQW6

0.72

MYO19

80179

Q96H55

0.72

MYO18A

399687

Q92614

0.72