Gene Symbol | TMOD1 |
Entrez ID | 7111 |
Uniprot ID | P28289 |
Description | tropomodulin 1 |
Chromosomal Location | chr9: 97,501,180-97,601,748 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006936 |
muscle contraction |
A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. |
IBA |
BP |
GO:0007015 |
actin filament organization |
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
IBA |
BP |
GO:0008344 |
adult locomotory behavior |
Locomotory behavior in a fully developed and mature organism. |
IEA |
BP |
GO:0030049 |
muscle filament sliding |
The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated. |
TAS |
BP |
GO:0030239 |
myofibril assembly |
Formation of myofibrils, the repeating units of striated muscle. |
IBA |
BP |
GO:0051694 |
pointed-end actin filament capping |
The binding of a protein or protein complex to the pointed (or minus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits. |
IEA |
BP |
GO:0070307 |
lens fiber cell development |
The process whose specific outcome is the progression of a lens fiber cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a lens fiber cell fate. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye. |
IEA |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
TAS |
CC |
GO:0005865 |
striated muscle thin filament |
Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils. |
IBA |
CC |
GO:0005884 |
actin filament |
A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane. |
IDA |
CC |
GO:0008180 |
COP9 signalosome |
A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome. |
IDA |
CC |
GO:0016020 |
membrane |
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
IEA |
CC |
GO:0030016 |
myofibril |
The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism. |
IDA |
CC |
GO:0030017 |
sarcomere |
The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. |
IDA |
CC |
GO:0030863 |
cortical cytoskeleton |
The portion of the cytoskeleton that lies just beneath the plasma membrane. |
IEA |
MF |
GO:0003779 |
actin binding |
Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. |
IDA |
MF |
GO:0005523 |
tropomyosin binding |
Interacting selectively and non-covalently with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle. |
IBA |
MF |
GO:0051015 |
actin filament binding |
Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. |
IEA |
Domain ID | Description |
---|---|
IPR004934 |
Tropomodulin |
IPR030135 |
Tropomodulin-1 |
IPR032675 |
Leucine-rich repeat domain, L domain-like |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
WP383 |
Striated Muscle Contraction |
WikiPathways |
UMLS CUI | UMLS Term |
---|---|
C0029927 |
Ovarian Cysts |
C0033578 |
Prostatic Neoplasms |
Tissue | Cell Type |
---|---|
heart muscle |
myocytes |
Pubmed ID | Author | Year | Title |
---|---|---|---|
15308691 |
Jansen et al. |
2004 |
Abnormal Gene Expression Profiles in Human Ovaries from Polycystic Ovary Syndrome Patients |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
TLR2 |
7097 |
O60603 |
0.49 |
WARS |
7453 |
P23381 |
0.49 |
FBXW7 |
55294 |
Q969H0 |
0.49 |
TPM3 |
7170 |
P06753 |
0.52 |
FLII |
2314 |
Q13045 |
0.63 |
GSN |
2934 |
P06396 |
0.63 |
MYO5B |
4645 |
Q9ULV0 |
0.63 |
SNX1 |
6642 |
Q13596 |
0.63 |
LRRFIP1 |
9208 |
Q32MZ4 |
0.63 |
LRRFIP2 |
9209 |
Q9Y608 |
0.63 |
TBC1D4 |
9882 |
O60343 |
0.63 |
AGTPBP1 |
23287 |
Q9UPW5 |
0.63 |
NIN |
51199 |
Q8N4C6 |
0.63 |
SCIN |
85477 |
Q9Y6U3 |
0.63 |
NEB |
4703 |
P20929 |
0.76 |
MYO5C |
55930 |
Q9NQX4 |
0.82 |
APC |
324 |
P25054 |
0.49 |
BUB1 |
699 |
O43683 |
0.49 |
CDH1 |
999 |
P12830 |
0.49 |
CDKN2A |
1029 |
Q8N726 |
0.49 |
DCC |
1630 |
P43146 |
0.49 |
ODC1 |
4953 |
P11926 |
0.49 |
PIK3CA |
5290 |
P42336 |
0.49 |
DLC1 |
10395 |
Q96QB1 |
0.49 |
MLH3 |
27030 |
Q9UHC1 |
0.49 |
EFHD2 |
79180 |
Q96C19 |
0.49 |
NTRK1 |
4914 |
P04629 |
0.63 |
PRKAA2 |
5563 |
P54646 |
0.63 |
PAN2 |
9924 |
Q504Q3 |
0.63 |
COPS5 |
10987 |
Q92905 |
0.63 |
TMSB10 |
9168 |
P63313 |
0.67 |
ADD1 |
118 |
P35611 |
0.72 |
CAPZA2 |
830 |
P47755 |
0.72 |
CDK2 |
1017 |
P24941 |
0.72 |
DBN1 |
1627 |
Q16643 |
0.72 |
FLNA |
2316 |
P21333 |
0.72 |
MYH9 |
4627 |
P35579 |
0.72 |
MYO1C |
4641 |
O00159 |
0.72 |
PPP1CB |
5500 |
P62140 |
0.72 |
IQGAP1 |
8826 |
P46940 |
0.72 |
PDLIM7 |
9260 |
Q9NR12 |
0.72 |
SYNPO |
11346 |
Q8N3V7 |
0.72 |
MAPRE1 |
22919 |
Q15691 |
0.72 |
LIMA1 |
51474 |
Q9UHB6 |
0.72 |
ANLN |
54443 |
Q9NQW6 |
0.72 |
MYO19 |
80179 |
Q96H55 |
0.72 |
MYO18A |
399687 |
Q92614 |
0.72 |