Protein Description

Gene Symbol SRSF6
Entrez ID 6431
Uniprot ID Q13247
Description serine/arginine-rich splicing factor 6
Chromosomal Location chr20: 43,457,928-43,464,247
Ontology GO ID GO Term Definition Evidence

BP

GO:0000380

alternative mRNA splicing, via spliceosome

The process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition.

IDA

BP

GO:0000381

regulation of alternative mRNA splicing, via spliceosome

Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.

IDA|IMP

BP

GO:0000398

mRNA splicing, via spliceosome

The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.

TAS

BP

GO:0006369

termination of RNA polymerase II transcription

The process in which the synthesis of an RNA molecule by RNA polymerase II using a DNA template is completed.

TAS

BP

GO:0006376

mRNA splice site selection

Selection of a splice site by components of the assembling spliceosome.

IMP

BP

GO:0006405

RNA export from nucleus

The directed movement of RNA from the nucleus to the cytoplasm.

TAS

BP

GO:0006406

mRNA export from nucleus

The directed movement of mRNA from the nucleus to the cytoplasm.

TAS

BP

GO:0010837

regulation of keratinocyte proliferation

Any process that modulates the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.

IMP

BP

GO:0031124

mRNA 3'-end processing

Any process involved in forming the mature 3' end of an mRNA molecule.

TAS

BP

GO:0032868

response to insulin

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.

IEA

BP

GO:0045617

negative regulation of keratinocyte differentiation

Any process that stops, prevents, or reduces the frequency, rate or extent of keratinocyte differentiation.

IMP

BP

GO:0048025

negative regulation of mRNA splicing, via spliceosome

Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.

IDA

BP

GO:0060501

positive regulation of epithelial cell proliferation involved in lung morphogenesis

Any process that increases the rate or frequency of epithelial cell proliferation that results in the lung attaining its shape.

IDA

BP

GO:0060548

negative regulation of cell death

Any process that decreases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.

IDA

BP

GO:0061041

regulation of wound healing

Any process that modulates the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.

IMP

BP

GO:2000675

negative regulation of type B pancreatic cell apoptotic process

Any process that stops, prevents or reduces the frequency, rate or extent of type B pancreatic cell apoptotic process.

IEA

CC

GO:0005654

nucleoplasm

That part of the nuclear content other than the chromosomes or the nucleolus.

IDA|TAS

CC

GO:0016607

nuclear speck

A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.

IDA

MF

GO:0000166

nucleotide binding

Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

IEA

MF

GO:0003723

RNA binding

Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

IDA

MF

GO:0005515

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

IPI

MF

GO:0036002

pre-mRNA binding

Interacting selectively and non-covalently with pre-messenger RNA (pre-mRNA), an intermediate molecule between DNA and protein that may contain introns and, at least in part, encodes one or more proteins. Introns are removed from pre-mRNA to form a mRNA molecule.

IDA

MF

GO:0044822

poly(A) RNA binding

Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases.

IDA

Domain ID Description

IPR000504

RNA recognition motif domain

IPR034511

SRSF6, RNA recognition motif 1

Pathway ID Pathway Term Pathway Source

hsa03040

Spliceosome

KEGG

hsa05168

Herpes simplex infection

KEGG

WP411

mRNA Processing

WikiPathways

No diseases found.

Tissue Cell Type

adrenal gland

glandular cells

appendix

glandular cells

bone marrow

hematopoietic cells

breast

adipocytes

breast

glandular cells

breast

myoepithelial cells

bronchus

respiratory epithelial cells

caudate

glial cells

caudate

neuronal cells

cerebellum

cells in granular layer

cerebellum

cells in molecular layer

cerebellum

Purkinje cells

cerebral cortex

glial cells

cerebral cortex

neuronal cells

cervix, uterine

glandular cells

cervix, uterine

squamous epithelial cells

colon

endothelial cells

colon

glandular cells

colon

peripheral nerve/ganglion

duodenum

glandular cells

endometrium

glandular cells

epididymis

glandular cells

esophagus

squamous epithelial cells

fallopian tube

glandular cells

gallbladder

glandular cells

heart muscle

myocytes

hippocampus

neuronal cells

kidney

cells in glomeruli

kidney

cells in tubules

lung

pneumocytes

nasopharynx

respiratory epithelial cells

oral mucosa

squamous epithelial cells

pancreas

exocrine glandular cells

placenta

decidual cells

placenta

trophoblastic cells

prostate

glandular cells

rectum

glandular cells

salivary gland

glandular cells

seminal vesicle

glandular cells

skin

fibroblasts

skin

keratinocytes

skin

Langerhans

skin

melanocytes

skin

epidermal cells

small intestine

glandular cells

soft tissue

adipocytes

soft tissue

chondrocytes

soft tissue

fibroblasts

soft tissue

peripheral nerve

stomach

glandular cells

testis

cells in seminiferous ducts

testis

Leydig cells

thyroid gland

glandular cells

tonsil

germinal center cells

tonsil

non-germinal center cells

tonsil

squamous epithelial cells

urinary bladder

urothelial cells

vagina

squamous epithelial cells

No databases found.

Pubmed ID Author Year Title

22951915

Haozi et al.

2012

Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome

Gene Symbol Entrez ID Uniprot ID Score

RBBP4

5928

Q09028

0.49

SRSF1

6426

Q07955

0.49

ATL3

25923

Q6DD88

0.49

TRA2A

29896

Q13595

0.49

APP

351

P05067

0.56

RPL24

6152

P83731

0.63

LUC7L2

51631

Q9Y383

0.63

TOE1

114034

Q96GM8

0.63

SRPK1

6732

Q96SB4

0.70

TRA2B

6434

P62995

0.73

RNPS1

10921

Q15287

0.73

EWSR1

2130

Q01844

0.49

LMNB1

4001

P20700

0.49

SRSF3

6428

P84103

0.49

SRSF7

6432

Q16629

0.49

EIF3I

8668

Q13347

0.49

SRSF9

8683

Q13242

0.49

SRSF10

10772

O75494

0.49

SUB1

10923

P53999

0.49

CLK1

1195

P49759

0.52

BARD1

580

Q99728

0.63

ELAVL1

1994

Q15717

0.63

ESR1

2099

P03372

0.63

HNRNPA1

3178

P09651

0.63

JUN

3725

P05412

0.63

MDM2

4193

Q00987

0.63

NTRK1

4914

P04629

0.63

SRSF4

6429

Q08170

0.63

TP53

7157

P04637

0.63

VCAM1

7412

P19320

0.63

XPO1

7514

O14980

0.63

YWHAE

7531

P62258

0.63

YWHAG

7532

P61981

0.63

SF1

7536

Q15637

0.63

CNBP

7555

P62633

0.63

SF3A2

8175

Q15428

0.63

RBM10

8241

P98175

0.63

CUL2

8453

Q13617

0.63

CUL1

8454

Q13616

0.63

EED

8726

O75530

0.63

KIAA0101

9768

Q15004

0.63

CUL7

9820

Q14999

0.63

PAN2

9924

Q504Q3

0.63

SF3B4

10262

Q15427

0.63

PPARGC1A

10891

Q9UBK2

0.63

COPS5

10987

Q92905

0.63

SNW1

22938

Q13573

0.63

RRP1B

23076

Q14684

0.63

OBSL1

23363

O75147

0.63

TARDBP

23435

Q13148

0.63

SUZ12

23512

Q15022

0.63

LUZP4

51213

Q9P127

0.63

DDX41

51428

Q9UJV9

0.63

CAND1

55832

Q86VP6

0.63

SNIP1

79753

Q8TAD8

0.63

SREK1

140890

Q8WXA9

0.63

ASB18

401036

Q6ZVZ8

0.63

HNRNPD

3184

Q14103

0.72

MAGOH

4116

P61326

0.72

EIF4A3

9775

P38919

0.72

YWHAQ

10971

P27348

0.72

SRPK3

26576

Q9UPE1

0.72

TERF1

7013

P54274

0.73

TERF2

7014

Q15554

0.73

SRRM1

10250

Q8IYB3

0.73

SRPK2

6733

P78362

0.84