Protein Description

Gene Symbol SDHB
Entrez ID 6390
Uniprot ID P21912
Description succinate dehydrogenase complex subunit B, iron sulfur (Ip)
Chromosomal Location chr1: 17,018,722-17,054,170
Ontology GO ID GO Term Definition Evidence

BP

GO:0006099

tricarboxylic acid cycle

A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.

IEA|TAS

BP

GO:0006105

succinate metabolic process

The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle.

IEA

BP

GO:0009060

aerobic respiration

The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.

TAS

BP

GO:0022904

respiratory electron transport chain

A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.

IBA

CC

GO:0005654

nucleoplasm

That part of the nuclear content other than the chromosomes or the nucleolus.

IDA

CC

GO:0005739

mitochondrion

A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

IDA

CC

GO:0005743

mitochondrial inner membrane

The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.

ISS|TAS

CC

GO:0005749

mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)

A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain.

ISS

CC

GO:0005886

plasma membrane

The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

IDA

CC

GO:0031966

mitochondrial membrane

Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope.

IBA

CC

GO:0045273

respiratory chain complex II

A part of the respiratory chain, containing the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain.

IBA

CC

GO:0070062

extracellular exosome

A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

IDA

MF

GO:0000104

succinate dehydrogenase activity

Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor.

IBA

MF

GO:0005515

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

IPI

MF

GO:0008177

succinate dehydrogenase (ubiquinone) activity

Catalysis of the reaction: succinate + ubiquinone = fumarate + ubiquinol.

IEA

MF

GO:0009055

electron carrier activity

Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.

IBA

MF

GO:0046872

metal ion binding

Interacting selectively and non-covalently with any metal ion.

IEA

MF

GO:0048039

ubiquinone binding

Interacting selectively and non-covalently with ubiquinone, a quinone derivative with a tail of isoprene units.

ISS

MF

GO:0051537

2 iron, 2 sulfur cluster binding

Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.

IBA|ISS

MF

GO:0051538

3 iron, 4 sulfur cluster binding

Interacting selectively and non-covalently with a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing.

IBA|ISS

MF

GO:0051539

4 iron, 4 sulfur cluster binding

Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.

IBA|ISS

Domain ID Description

IPR001041

2Fe-2S ferredoxin-type iron-sulfur binding domain

IPR004489

Succinate dehydrogenase/fumarate reductase iron-sulphur protein

IPR006058

2Fe-2S ferredoxin, iron-sulphur binding site

IPR009051

Alpha-helical ferredoxin

IPR012675

Beta-grasp domain

IPR017896

4Fe-4S ferredoxin-type, iron-sulphur binding domain

IPR017900

4Fe-4S ferredoxin, iron-sulphur binding, conserved site

IPR025192

Succinate dehydogenase/fumarate reductase N-terminal

Pathway ID Pathway Term Pathway Source

hsa00020

Citrate cycle (TCA cycle)

KEGG

hsa00190

Oxidative phosphorylation

KEGG

hsa01100

Metabolic pathways

KEGG

hsa01200

Carbon metabolism

KEGG

hsa04932

Non-alcoholic fatty liver disease (NAFLD)

KEGG

hsa05010

Alzheimer's disease

KEGG

hsa05012

Parkinson's disease

KEGG

hsa05016

Huntington's disease

KEGG

WP111

Electron Transport Chain

WikiPathways

WP78

TCA Cycle

WikiPathways

h_etcPathway

Electron Transport Reaction in Mitochondria

BioCarta

UMLS CUI UMLS Term

C0018553

Hamartoma Syndrome, Multiple

C0027672

Neoplastic Syndromes, Hereditary

C0030421

Paraganglioma

C0031511

Pheochromocytoma

C0238198

Gastrointestinal Stromal Tumors

Tissue Cell Type

adrenal gland

glandular cells

appendix

glandular cells

breast

glandular cells

breast

myoepithelial cells

bronchus

respiratory epithelial cells

caudate

neuronal cells

cerebellum

cells in granular layer

cerebral cortex

glial cells

cerebral cortex

neuronal cells

colon

glandular cells

duodenum

glandular cells

endometrium

glandular cells

esophagus

squamous epithelial cells

gallbladder

glandular cells

heart muscle

myocytes

hippocampus

glial cells

kidney

cells in tubules

liver

hepatocytes

lung

macrophages

lymph node

non-germinal center cells

nasopharynx

respiratory epithelial cells

pancreas

exocrine glandular cells

parathyroid gland

glandular cells

rectum

glandular cells

skin

melanocytes

small intestine

glandular cells

spleen

cells in white pulp

stomach

glandular cells

testis

cells in seminiferous ducts

testis

Leydig cells

tonsil

germinal center cells

tonsil

non-germinal center cells

urinary bladder

urothelial cells

No databases found.

Pubmed ID Author Year Title

22951915

Haozi et al.

2012

Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome

Gene Symbol Entrez ID Uniprot ID Score

ACAT1

38

P24752

0.49

AGL

178

P35573

0.49

COX4I1

1327

P13073

0.49

GPD2

2820

P43304

0.49

GPI

2821

P06744

0.49

GSN

2934

P06396

0.49

MT-CO2

4513

P00403

0.49

NDUFA2

4695

O43678

0.49

NDUFA6

4700

P56556

0.49

NDUFA9

4704

Q16795

0.49

NDUFA10

4705

O95299

0.49

NDUFB6

4712

O95139

0.49

NDUFS4

4724

O43181

0.49

OXA1L

5018

Q15070

0.49

PDHA1

5160

P08559

0.49

PDHA2

5161

P29803

0.49

SSBP1

6742

Q04837

0.49

UQCRB

7381

P14927

0.49

UQCRC2

7385

P22695

0.49

VDAC3

7419

Q9Y277

0.49

RAB7A

7879

P51149

0.49

IQGAP1

8826

P46940

0.49

PRDX6

9588

P30041

0.49

ATP6AP2

10159

O75787

0.49

RBM14

10432

Q96PK6

0.49

TOMM40

10452

O96008

0.49

TMED2

10959

Q15363

0.49

ILVBL

10994

A1L0T0

0.49

LAMTOR2

28956

Q9Y2Q5

0.49

NDUFB11

54539

Q9NX14

0.49

TOMM7

54543

Q9P0U1

0.49

OCIAD1

54940

Q9NX40

0.49

MRPL20

55052

Q9BYC9

0.49

MRPS10

55173

P82664

0.49

IWS1

55677

Q96ST2

0.49

CISD1

55847

Q9NZ45

0.49

NDUFA12

55967

Q9UI09

0.49

MRPS5

64969

P82675

0.49

MRPL40

64976

Q9NQ50

0.49

SLC25A22

79751

Q9H936

0.49

TIMM50

92609

Q3ZCQ8

0.49

PIGS

94005

Q96S52

0.49

TXLNA

200081

P40222

0.49

HNRNPUL2

221092

Q1KMD3

0.49

SPNS1

83985

Q9H2V7

0.52

DLAT

1737

P10515

0.56

UQCRFS1

7386

P47985

0.56

SUCLA2

8803

Q9P2R7

0.56

NDUFB9

4715

Q9Y6M9

0.59

NDUFS1

4719

P28331

0.59

NDUFV2

4729

P19404

0.59

MRPL45

84311

Q9BRJ2

0.59

FXN

2395

Q16595

0.63

SDHA

6389

P31040

0.78

ACLY

47

P53396

0.49

ATP5B

506

P06576

0.49

CS

1431

O75390

0.49

LDHA

3939

P00338

0.49

MAT2A

4144

P31153

0.49

MDH2

4191

P40926

0.49

RAB8A

4218

P61006

0.49

NDUFV1

4723

P49821

0.49

NDUFS8

4728

O00217

0.49

SLC25A3

5250

Q00325

0.49

UAP1

6675

Q16222

0.49

MTCH2

23788

Q9Y6C9

0.49

MRPL48

51642

Q96GC5

0.49

UAP1L1

91373

Q3KQV9

0.49

DLD

1738

P09622

0.56

SUCLG1

8802

P53597

0.56

ABCA1

19

O95477

0.63

SLC25A5

292

P05141

0.63

GEM

2669

P55040

0.63

ITGA4

3676

P13612

0.63

JUN

3725

P05412

0.63

MCC

4163

P23508

0.63

ABCE1

6059

P61221

0.63

VCAM1

7412

P19320

0.63

CUL3

8452

Q13618

0.63

CUL2

8453

Q13617

0.63

CUL1

8454

Q13616

0.63

IKBKE

9641

Q14164

0.63

KIAA0101

9768

Q15004

0.63

SPRY2

10253

O43597

0.63

COPS5

10987

Q92905

0.63

GABARAP

11337

O95166

0.63

PIK3R5

23533

Q8WYR1

0.63

GABARAPL1

23710

Q9H0R8

0.63

XRN1

54464

Q8IZH2

0.63

OTUB1

55611

Q96FW1

0.63

CAND1

55832

Q86VP6

0.63

SDHC

6391

Q99643

0.71

TP53BP1

7158

Q12888

0.72