| Gene Symbol | SDHB |
| Entrez ID | 6390 |
| Uniprot ID | P21912 |
| Description | succinate dehydrogenase complex subunit B, iron sulfur (Ip) |
| Chromosomal Location | chr1: 17,018,722-17,054,170 |
| Ontology | GO ID | GO Term | Definition | Evidence |
|---|---|---|---|---|
|
BP |
GO:0006099 |
tricarboxylic acid cycle |
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle. |
IEA|TAS |
|
BP |
GO:0006105 |
succinate metabolic process |
The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle. |
IEA |
|
BP |
GO:0009060 |
aerobic respiration |
The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor. |
TAS |
|
BP |
GO:0022904 |
respiratory electron transport chain |
A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. |
IBA |
|
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
IDA |
|
CC |
GO:0005739 |
mitochondrion |
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
IDA |
|
CC |
GO:0005743 |
mitochondrial inner membrane |
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae. |
ISS|TAS |
|
CC |
GO:0005749 |
mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) |
A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain. |
ISS |
|
CC |
GO:0005886 |
plasma membrane |
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
IDA |
|
CC |
GO:0031966 |
mitochondrial membrane |
Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. |
IBA |
|
CC |
GO:0045273 |
respiratory chain complex II |
A part of the respiratory chain, containing the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain. |
IBA |
|
CC |
GO:0070062 |
extracellular exosome |
A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
IDA |
|
MF |
GO:0000104 |
succinate dehydrogenase activity |
Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor. |
IBA |
|
MF |
GO:0005515 |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IPI |
|
MF |
GO:0008177 |
succinate dehydrogenase (ubiquinone) activity |
Catalysis of the reaction: succinate + ubiquinone = fumarate + ubiquinol. |
IEA |
|
MF |
GO:0009055 |
electron carrier activity |
Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. |
IBA |
|
MF |
GO:0046872 |
metal ion binding |
Interacting selectively and non-covalently with any metal ion. |
IEA |
|
MF |
GO:0048039 |
ubiquinone binding |
Interacting selectively and non-covalently with ubiquinone, a quinone derivative with a tail of isoprene units. |
ISS |
|
MF |
GO:0051537 |
2 iron, 2 sulfur cluster binding |
Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands. |
IBA|ISS |
|
MF |
GO:0051538 |
3 iron, 4 sulfur cluster binding |
Interacting selectively and non-covalently with a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing. |
IBA|ISS |
|
MF |
GO:0051539 |
4 iron, 4 sulfur cluster binding |
Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. |
IBA|ISS |
| Domain ID | Description |
|---|---|
|
IPR001041 |
2Fe-2S ferredoxin-type iron-sulfur binding domain |
|
IPR004489 |
Succinate dehydrogenase/fumarate reductase iron-sulphur protein |
|
IPR006058 |
2Fe-2S ferredoxin, iron-sulphur binding site |
|
IPR009051 |
Alpha-helical ferredoxin |
|
IPR012675 |
Beta-grasp domain |
|
IPR017896 |
4Fe-4S ferredoxin-type, iron-sulphur binding domain |
|
IPR017900 |
4Fe-4S ferredoxin, iron-sulphur binding, conserved site |
|
IPR025192 |
Succinate dehydogenase/fumarate reductase N-terminal |
| Pathway ID | Pathway Term | Pathway Source |
|---|---|---|
|
hsa00020 |
Citrate cycle (TCA cycle) |
KEGG |
|
hsa00190 |
Oxidative phosphorylation |
KEGG |
|
hsa01100 |
Metabolic pathways |
KEGG |
|
hsa01200 |
Carbon metabolism |
KEGG |
|
hsa04932 |
Non-alcoholic fatty liver disease (NAFLD) |
KEGG |
|
hsa05010 |
Alzheimer's disease |
KEGG |
|
hsa05012 |
Parkinson's disease |
KEGG |
|
hsa05016 |
Huntington's disease |
KEGG |
|
WP111 |
Electron Transport Chain |
WikiPathways |
|
WP78 |
TCA Cycle |
WikiPathways |
|
h_etcPathway |
Electron Transport Reaction in Mitochondria |
BioCarta |
| UMLS CUI | UMLS Term |
|---|---|
|
C0018553 |
Hamartoma Syndrome, Multiple |
|
C0027672 |
Neoplastic Syndromes, Hereditary |
|
C0030421 |
Paraganglioma |
|
C0031511 |
Pheochromocytoma |
|
C0238198 |
Gastrointestinal Stromal Tumors |
| Tissue | Cell Type |
|---|---|
|
adrenal gland |
glandular cells |
|
appendix |
glandular cells |
|
breast |
glandular cells |
|
breast |
myoepithelial cells |
|
bronchus |
respiratory epithelial cells |
|
caudate |
neuronal cells |
|
cerebellum |
cells in granular layer |
|
cerebral cortex |
glial cells |
|
cerebral cortex |
neuronal cells |
|
colon |
glandular cells |
|
duodenum |
glandular cells |
|
endometrium |
glandular cells |
|
esophagus |
squamous epithelial cells |
|
gallbladder |
glandular cells |
|
heart muscle |
myocytes |
|
hippocampus |
glial cells |
|
kidney |
cells in tubules |
|
liver |
hepatocytes |
|
lung |
macrophages |
|
lymph node |
non-germinal center cells |
|
nasopharynx |
respiratory epithelial cells |
|
pancreas |
exocrine glandular cells |
|
parathyroid gland |
glandular cells |
|
rectum |
glandular cells |
|
skin |
melanocytes |
|
small intestine |
glandular cells |
|
spleen |
cells in white pulp |
|
stomach |
glandular cells |
|
testis |
cells in seminiferous ducts |
|
testis |
Leydig cells |
|
tonsil |
germinal center cells |
|
tonsil |
non-germinal center cells |
|
urinary bladder |
urothelial cells |
| Pubmed ID | Author | Year | Title |
|---|---|---|---|
|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
| Gene Symbol | Entrez ID | Uniprot ID | Score |
|---|---|---|---|
|
ACAT1 |
38 |
P24752 |
0.49 |
|
AGL |
178 |
P35573 |
0.49 |
|
COX4I1 |
1327 |
P13073 |
0.49 |
|
GPD2 |
2820 |
P43304 |
0.49 |
|
GPI |
2821 |
P06744 |
0.49 |
|
GSN |
2934 |
P06396 |
0.49 |
|
MT-CO2 |
4513 |
P00403 |
0.49 |
|
NDUFA2 |
4695 |
O43678 |
0.49 |
|
NDUFA6 |
4700 |
P56556 |
0.49 |
|
NDUFA9 |
4704 |
Q16795 |
0.49 |
|
NDUFA10 |
4705 |
O95299 |
0.49 |
|
NDUFB6 |
4712 |
O95139 |
0.49 |
|
NDUFS4 |
4724 |
O43181 |
0.49 |
|
OXA1L |
5018 |
Q15070 |
0.49 |
|
PDHA1 |
5160 |
P08559 |
0.49 |
|
PDHA2 |
5161 |
P29803 |
0.49 |
|
SSBP1 |
6742 |
Q04837 |
0.49 |
|
UQCRB |
7381 |
P14927 |
0.49 |
|
UQCRC2 |
7385 |
P22695 |
0.49 |
|
VDAC3 |
7419 |
Q9Y277 |
0.49 |
|
RAB7A |
7879 |
P51149 |
0.49 |
|
IQGAP1 |
8826 |
P46940 |
0.49 |
|
PRDX6 |
9588 |
P30041 |
0.49 |
|
ATP6AP2 |
10159 |
O75787 |
0.49 |
|
RBM14 |
10432 |
Q96PK6 |
0.49 |
|
TOMM40 |
10452 |
O96008 |
0.49 |
|
TMED2 |
10959 |
Q15363 |
0.49 |
|
ILVBL |
10994 |
A1L0T0 |
0.49 |
|
LAMTOR2 |
28956 |
Q9Y2Q5 |
0.49 |
|
NDUFB11 |
54539 |
Q9NX14 |
0.49 |
|
TOMM7 |
54543 |
Q9P0U1 |
0.49 |
|
OCIAD1 |
54940 |
Q9NX40 |
0.49 |
|
MRPL20 |
55052 |
Q9BYC9 |
0.49 |
|
MRPS10 |
55173 |
P82664 |
0.49 |
|
IWS1 |
55677 |
Q96ST2 |
0.49 |
|
CISD1 |
55847 |
Q9NZ45 |
0.49 |
|
NDUFA12 |
55967 |
Q9UI09 |
0.49 |
|
MRPS5 |
64969 |
P82675 |
0.49 |
|
MRPL40 |
64976 |
Q9NQ50 |
0.49 |
|
SLC25A22 |
79751 |
Q9H936 |
0.49 |
|
TIMM50 |
92609 |
Q3ZCQ8 |
0.49 |
|
PIGS |
94005 |
Q96S52 |
0.49 |
|
TXLNA |
200081 |
P40222 |
0.49 |
|
HNRNPUL2 |
221092 |
Q1KMD3 |
0.49 |
|
SPNS1 |
83985 |
Q9H2V7 |
0.52 |
|
DLAT |
1737 |
P10515 |
0.56 |
|
UQCRFS1 |
7386 |
P47985 |
0.56 |
|
SUCLA2 |
8803 |
Q9P2R7 |
0.56 |
|
NDUFB9 |
4715 |
Q9Y6M9 |
0.59 |
|
NDUFS1 |
4719 |
P28331 |
0.59 |
|
NDUFV2 |
4729 |
P19404 |
0.59 |
|
MRPL45 |
84311 |
Q9BRJ2 |
0.59 |
|
FXN |
2395 |
Q16595 |
0.63 |
|
SDHA |
6389 |
P31040 |
0.78 |
|
ACLY |
47 |
P53396 |
0.49 |
|
ATP5B |
506 |
P06576 |
0.49 |
|
CS |
1431 |
O75390 |
0.49 |
|
LDHA |
3939 |
P00338 |
0.49 |
|
MAT2A |
4144 |
P31153 |
0.49 |
|
MDH2 |
4191 |
P40926 |
0.49 |
|
RAB8A |
4218 |
P61006 |
0.49 |
|
NDUFV1 |
4723 |
P49821 |
0.49 |
|
NDUFS8 |
4728 |
O00217 |
0.49 |
|
SLC25A3 |
5250 |
Q00325 |
0.49 |
|
UAP1 |
6675 |
Q16222 |
0.49 |
|
MTCH2 |
23788 |
Q9Y6C9 |
0.49 |
|
MRPL48 |
51642 |
Q96GC5 |
0.49 |
|
UAP1L1 |
91373 |
Q3KQV9 |
0.49 |
|
DLD |
1738 |
P09622 |
0.56 |
|
SUCLG1 |
8802 |
P53597 |
0.56 |
|
ABCA1 |
19 |
O95477 |
0.63 |
|
SLC25A5 |
292 |
P05141 |
0.63 |
|
GEM |
2669 |
P55040 |
0.63 |
|
ITGA4 |
3676 |
P13612 |
0.63 |
|
JUN |
3725 |
P05412 |
0.63 |
|
MCC |
4163 |
P23508 |
0.63 |
|
ABCE1 |
6059 |
P61221 |
0.63 |
|
VCAM1 |
7412 |
P19320 |
0.63 |
|
CUL3 |
8452 |
Q13618 |
0.63 |
|
CUL2 |
8453 |
Q13617 |
0.63 |
|
CUL1 |
8454 |
Q13616 |
0.63 |
|
IKBKE |
9641 |
Q14164 |
0.63 |
|
KIAA0101 |
9768 |
Q15004 |
0.63 |
|
SPRY2 |
10253 |
O43597 |
0.63 |
|
COPS5 |
10987 |
Q92905 |
0.63 |
|
GABARAP |
11337 |
O95166 |
0.63 |
|
PIK3R5 |
23533 |
Q8WYR1 |
0.63 |
|
GABARAPL1 |
23710 |
Q9H0R8 |
0.63 |
|
XRN1 |
54464 |
Q8IZH2 |
0.63 |
|
OTUB1 |
55611 |
Q96FW1 |
0.63 |
|
CAND1 |
55832 |
Q86VP6 |
0.63 |
|
SDHC |
6391 |
Q99643 |
0.71 |
|
TP53BP1 |
7158 |
Q12888 |
0.72 |