Gene Symbol | RAP1A |
Entrez ID | 5906 |
Uniprot ID | P62834 |
Description | RAP1A, member of RAS oncogene family |
Chromosomal Location | chr1: 111,542,218-111,716,691 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0000186 |
activation of MAPKK activity |
The initiation of the activity of the inactive enzyme MAP kinase kinase (MAPKK). |
TAS |
BP |
GO:0007165 |
signal transduction |
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
TAS |
BP |
GO:0010976 |
positive regulation of neuron projection development |
Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). |
ISS |
BP |
GO:0015031 |
protein transport |
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
IDA |
BP |
GO:0032486 |
Rap protein signal transduction |
A series of molecular signals within the cell that are mediated by a member of the Rap family of proteins switching to a GTP-bound active state. |
IMP |
BP |
GO:0032966 |
negative regulation of collagen biosynthetic process |
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. |
IEA |
BP |
GO:0035690 |
cellular response to drug |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease. |
IEA |
BP |
GO:0038180 |
nerve growth factor signaling pathway |
A series of molecular signals initiated by the binding of nerve growth factor (NGF) to a receptor on the surface of the target cell, and ending with regulation of a downstream cellular process, e.g. transcription. |
ISS |
BP |
GO:0043547 |
positive regulation of GTPase activity |
Any process that activates or increases the activity of a GTPase. |
ISS |
BP |
GO:0045860 |
positive regulation of protein kinase activity |
Any process that activates or increases the frequency, rate or extent of protein kinase activity. |
ISS |
BP |
GO:0046326 |
positive regulation of glucose import |
Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle. |
IEA |
BP |
GO:0050766 |
positive regulation of phagocytosis |
Any process that activates or increases the frequency, rate or extent of phagocytosis. |
IEA |
BP |
GO:0050796 |
regulation of insulin secretion |
Any process that modulates the frequency, rate or extent of the regulated release of insulin. |
TAS |
BP |
GO:0061028 |
establishment of endothelial barrier |
The establishment of a barrier between endothelial cell layers, such as those in the brain, lung or intestine, to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition. |
IMP |
BP |
GO:0070374 |
positive regulation of ERK1 and ERK2 cascade |
Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade. |
ISS |
BP |
GO:0071320 |
cellular response to cAMP |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus. |
IDA |
BP |
GO:0071333 |
cellular response to glucose stimulus |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus. |
IEA |
BP |
GO:0097327 |
response to antineoplastic agent |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antineoplastic agent stimulus. An antineoplastic agent is a substance that inhibits or prevents the proliferation of neoplasms. |
IEA |
BP |
GO:0097421 |
liver regeneration |
The regrowth of lost or destroyed liver. |
IEA |
BP |
GO:1901888 |
regulation of cell junction assembly |
Any process that modulates the frequency, rate or extent of cell junction assembly. |
IMP |
BP |
GO:1990090 |
cellular response to nerve growth factor stimulus |
A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus. |
ISS |
BP |
GO:2000301 |
negative regulation of synaptic vesicle exocytosis |
Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle exocytosis. |
IEA |
BP |
GO:2001214 |
positive regulation of vasculogenesis |
Any process that activates or increases the frequency, rate or extent of vasculogenesis. |
ISS |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
CC |
GO:0005769 |
early endosome |
A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways. |
ISS |
CC |
GO:0005770 |
late endosome |
A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center. |
ISS |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
TAS |
CC |
GO:0005886 |
plasma membrane |
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
TAS |
CC |
GO:0030054 |
cell junction |
A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix. |
ISS |
CC |
GO:0032045 |
guanyl-nucleotide exchange factor complex |
A protein complex that stimulates the exchange of guanyl nucleotides associated with a GTPase. |
IEA |
CC |
GO:0043005 |
neuron projection |
A prolongation or process extending from a nerve cell, e.g. an axon or dendrite. |
IEA |
CC |
GO:0043209 |
myelin sheath |
An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system. |
IEA |
CC |
GO:0048471 |
perinuclear region of cytoplasm |
Cytoplasm situated near, or occurring around, the nucleus. |
IDA |
CC |
GO:0070062 |
extracellular exosome |
A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
IDA |
MF |
GO:0003924 |
GTPase activity |
Catalysis of the reaction: GTP + H2O = GDP + phosphate. |
IEA |
MF |
GO:0005515 |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IPI |
MF |
GO:0005525 |
GTP binding |
Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
IEA |
MF |
GO:0008565 |
protein transporter activity |
Enables the directed movement of proteins into, out of or within a cell, or between cells. |
IDA |
MF |
GO:0017016 |
Ras GTPase binding |
Interacting selectively and non-covalently with any member of the Ras superfamily of monomeric GTPases. |
IEA |
MF |
GO:0017034 |
Rap guanyl-nucleotide exchange factor activity |
Stimulates the exchange of guanyl nucleotides associated with a GTPase of the Rap family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase. |
ISS |
MF |
GO:0032403 |
protein complex binding |
Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IDA |
Domain ID | Description |
---|---|
IPR001806 |
Small GTPase superfamily |
IPR005225 |
Small GTP-binding protein domain |
IPR020849 |
Small GTPase superfamily, Ras type |
IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa04010 |
MAPK signaling pathway |
KEGG |
hsa04014 |
Ras signaling pathway |
KEGG |
hsa04015 |
Rap1 signaling pathway |
KEGG |
hsa04024 |
cAMP signaling pathway |
KEGG |
hsa04062 |
Chemokine signaling pathway |
KEGG |
hsa04510 |
Focal adhesion |
KEGG |
hsa04530 |
Tight junction |
KEGG |
hsa04611 |
Platelet activation |
KEGG |
hsa04670 |
Leukocyte transendothelial migration |
KEGG |
hsa04720 |
Long-term potentiation |
KEGG |
hsa04722 |
Neurotrophin signaling pathway |
KEGG |
hsa04972 |
Pancreatic secretion |
KEGG |
hsa05211 |
Renal cell carcinoma |
KEGG |
WP437 |
EGF/EGFR Signaling Pathway |
WikiPathways |
WP734 |
Serotonin Receptor 4/6/7 and NR3C Signaling |
WikiPathways |
WP1984 |
Integrated Breast Cancer Pathway |
WikiPathways |
WP313 |
Signaling of Hepatocyte Growth Factor Receptor |
WikiPathways |
WP3929 |
Chemokine signaling pathway |
WikiPathways |
WP306 |
Focal Adhesion |
WikiPathways |
WP585 |
Interferon type I signaling pathways |
WikiPathways |
WP185 |
Integrin-mediated Cell Adhesion |
WikiPathways |
WP382 |
MAPK Signaling Pathway |
WikiPathways |
WP2636 |
Common Pathways Underlying Drug Addiction |
WikiPathways |
WP2032 |
Human Thyroid Stimulating Hormone (TSH) signaling pathway |
WikiPathways |
WP2380 |
Brain-Derived Neurotrophic Factor (BDNF) signaling pathway |
WikiPathways |
WP3888 |
VEGFA-VEGFR2 Signaling Pathway |
WikiPathways |
h_integrinPathway |
Integrin Signaling Pathway |
BioCarta |
h_metPathway |
Signaling of Hepatocyte Growth Factor Receptor |
BioCarta |
UMLS CUI | UMLS Term |
---|---|
C0029456 |
Osteoporosis |
Pubmed ID | Author | Year | Title |
---|---|---|---|
17148555 |
Wood et al. |
2007 |
Molecular Abnormalities in Oocytes from Women with Polycystic Ovary Syndrome Revealed by Microarray Analysis |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
ARHGDIA |
396 |
P52565 |
0.49 |
ECHS1 |
1892 |
P30084 |
0.49 |
RAB8A |
4218 |
P61006 |
0.49 |
RAB5A |
5868 |
P20339 |
0.49 |
RAB5B |
5869 |
P61020 |
0.49 |
RAB5C |
5878 |
P51148 |
0.49 |
UQCRC2 |
7385 |
P22695 |
0.49 |
RAB7A |
7879 |
P51149 |
0.49 |
RAB8B |
51762 |
Q92930 |
0.49 |
RASA1 |
5921 |
P20936 |
0.52 |
SMARCA4 |
6597 |
P51532 |
0.52 |
RASGRP2 |
10235 |
Q7LDG7 |
0.55 |
HSPA4 |
3308 |
P34932 |
0.56 |
SMARCA2 |
6595 |
P51531 |
0.56 |
BIN1 |
274 |
O00499 |
0.59 |
BMX |
660 |
P51813 |
0.59 |
HDAC1 |
3065 |
Q13547 |
0.59 |
TCEB3 |
6924 |
Q14241 |
0.59 |
FADD |
8772 |
Q13158 |
0.59 |
TNFRSF10C |
8794 |
O14798 |
0.59 |
FAF1 |
11124 |
Q9UNN5 |
0.59 |
RAP1A |
5906 |
P62834 |
0.62 |
GANAB |
23193 |
Q14697 |
0.63 |
YWHAZ |
7534 |
P63104 |
0.72 |
RUNDC3A |
10900 |
Q59EK9 |
0.75 |
TSC2 |
7249 |
P49815 |
0.84 |
RASSF5 |
83593 |
Q8WWW0 |
0.84 |
MLLT4 |
4301 |
P55196 |
0.88 |
RAF1 |
5894 |
P04049 |
0.90 |
CDK11B |
984 |
P21127 |
0.49 |
FEN1 |
2237 |
P39748 |
0.49 |
ILF3 |
3609 |
Q12906 |
0.49 |
HNRNPM |
4670 |
P52272 |
0.49 |
PON2 |
5445 |
Q15165 |
0.49 |
RAB1A |
5861 |
P62820 |
0.49 |
DNAJC8 |
22826 |
O75937 |
0.49 |
GNG12 |
55970 |
Q9UBI6 |
0.49 |
HSPA1A |
3303 |
P0DMV8 |
0.52 |
HSPA1B |
3304 |
P0DMV9 |
0.52 |
RASA3 |
22821 |
Q14644 |
0.52 |
PRKACA |
5566 |
P17612 |
0.55 |
BRAF |
673 |
P15056 |
0.56 |
CDC42 |
998 |
P60953 |
0.59 |
KRIT1 |
889 |
O00522 |
0.63 |
ELAVL1 |
1994 |
Q15717 |
0.63 |
ESR1 |
2099 |
P03372 |
0.63 |
MTOR |
2475 |
P42345 |
0.63 |
GJA1 |
2697 |
P17302 |
0.63 |
GNB1 |
2782 |
P62873 |
0.63 |
MDM2 |
4193 |
Q00987 |
0.63 |
RALA |
5898 |
P11233 |
0.63 |
TRAF6 |
7189 |
Q9Y4K3 |
0.63 |
VHL |
7428 |
P40337 |
0.63 |
DGKI |
9162 |
O75912 |
0.63 |
SIRT1 |
23411 |
Q96EB6 |
0.63 |
FTSJ1 |
24140 |
Q9UET6 |
0.63 |
RADIL |
55698 |
Q96JH8 |
0.63 |
UNK |
85451 |
Q9C0B0 |
0.63 |
GRDX |
117189 |
N/A |
0.63 |
RAP1GAP |
5909 |
P47736 |
0.65 |
ARHGEF1 |
9138 |
Q92888 |
0.65 |
RAPGEF3 |
10411 |
O95398 |
0.65 |
RAPGEF4 |
11069 |
Q8WZA2 |
0.65 |
GABARAPL2 |
11345 |
P60520 |
0.65 |
RASIP1 |
54922 |
Q5U651 |
0.65 |
RASGRP4 |
115727 |
Q8TDF6 |
0.65 |
APBB1IP |
54518 |
Q7Z5R6 |
0.67 |
FAS |
355 |
P25445 |
0.71 |
RHEB |
6009 |
Q15382 |
0.72 |
IQGAP1 |
8826 |
P46940 |
0.72 |
LIMA1 |
51474 |
Q9UHB6 |
0.72 |
NTRK1 |
4914 |
P04629 |
0.73 |
PPP2R1A |
5518 |
P30153 |
0.73 |
RGL4 |
266747 |
Q8IZJ4 |
0.75 |
PDE6D |
5147 |
O43924 |
0.76 |
RAPGEF5 |
9771 |
Q92565 |
0.77 |
RABAC1 |
10567 |
Q9UI14 |
0.77 |
RAPGEF6 |
51735 |
Q8TEU7 |
0.79 |
MTNR1A |
4543 |
P48039 |
0.83 |
RAP1GDS1 |
5910 |
P52306 |
0.83 |
RGS14 |
10636 |
O43566 |
0.87 |
RALGDS |
5900 |
Q12967 |
0.89 |
RAPGEF2 |
9693 |
Q9Y4G8 |
0.89 |