Protein Description

Gene Symbol PLOD1
Entrez ID 5351
Uniprot ID Q02809
Description procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
Chromosomal Location chr1: 11,934,205-11,975,538
Ontology GO ID GO Term Definition Evidence

BP

GO:0001666

response to hypoxia

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.

IEP

BP

GO:0006464

cellular protein modification process

The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).

NAS

BP

GO:0008544

epidermis development

The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species.

IMP|TAS

BP

GO:0046947

hydroxylysine biosynthetic process

The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.

TAS

BP

GO:0055114

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

TAS

CC

GO:0005789

endoplasmic reticulum membrane

The lipid bilayer surrounding the endoplasmic reticulum.

TAS

CC

GO:0030867

rough endoplasmic reticulum membrane

The lipid bilayer surrounding the rough endoplasmic reticulum.

IEA

CC

GO:0070062

extracellular exosome

A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

IDA

MF

GO:0005506

iron ion binding

Interacting selectively and non-covalently with iron (Fe) ions.

IEA

MF

GO:0008475

procollagen-lysine 5-dioxygenase activity

Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2.

TAS

MF

GO:0031418

L-ascorbic acid binding

Interacting selectively and non-covalently with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species.

IEA

MF

GO:0042803

protein homodimerization activity

Interacting selectively and non-covalently with an identical protein to form a homodimer.

TAS

Domain ID Description

IPR001006

Procollagen-lysine 5-dioxygenase

IPR005123

Oxoglutarate/iron-dependent dioxygenase

IPR006620

Prolyl 4-hydroxylase, alpha subunit

IPR029044

Nucleotide-diphospho-sugar transferases

Pathway ID Pathway Term Pathway Source

hsa00310

Lysine degradation

KEGG

UMLS CUI UMLS Term

C0022821

Kyphosis Deformity Of Spine

Tissue Cell Type

colon

glandular cells

endometrium

glandular cells

epididymis

glandular cells

placenta

decidual cells

rectum

glandular cells

stomach

glandular cells

No databases found.

Pubmed ID Author Year Title

22951915

Haozi et al.

2012

Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome

Gene Symbol Entrez ID Uniprot ID Score

POR

5447

P16435

0.49

NCDN

23154

Q9UBB6

0.63

PLOD1

5351

Q02809

0.75

HNRNPH2

3188

P55795

0.82

RNF169

254225

Q8NCN4

0.07

DDX1

1653

Q92499

0.49

OFD1

8481

O75665

0.49

NAE1

8883

Q13564

0.49

TJP2

9414

Q9UDY2

0.49

RPGRIP1L

23322

Q68CZ1

0.49

TCTN3

26123

Q6NUS6

0.49

TCTN1

79600

Q2MV58

0.49

COLGALT1

79709

Q8NBJ5

0.49

CDCA3

83461

Q99618

0.49

HNRNPA1

3178

P09651

0.63

NEDD8

4738

Q15843

0.63

NTRK1

4914

P04629

0.63

SUMO2

6613

P61956

0.63

TERF1

7013

P54274

0.63

TERF2

7014

Q15554

0.63

SUMO1

7341

P63165

0.63

USP4

7375

Q13107

0.63

CUL5

8065

Q93034

0.63

CUL4B

8450

Q13620

0.63

CUL3

8452

Q13618

0.63

CUL2

8453

Q13617

0.63

CUL1

8454

Q13616

0.63

ISG15

9636

P05161

0.63

KIAA0101

9768

Q15004

0.63

COPS5

10987

Q92905

0.63

GABARAP

11337

O95166

0.63

GABARAPL2

11345

P60520

0.63

OBSL1

23363

O75147

0.63

GABARAPL1

23710

Q9H0R8

0.63

GEMIN5

25929

Q8TEQ6

0.63

FBXO6

26270

Q9NRD1

0.63

LATS2

26524

Q9NRM7

0.63

SIRT7

51547

Q9NRC8

0.63

DCUN1D1

54165

Q96GG9

0.63

CAND1

55832

Q86VP6

0.63

MAP1LC3A

84557

Q9H492

0.63

PDIA3

2923

P30101

0.72

H2AFX

3014

P16104

0.72

MAP3K3

4215

Q99759

0.72