Protein Description

Gene Symbol PGD
Entrez ID 5226
Uniprot ID P52209
Description phosphogluconate dehydrogenase
Chromosomal Location chr1: 10,398,592-10,420,144
Ontology GO ID GO Term Definition Evidence

BP

GO:0006098

pentose-phosphate shunt

The glucose-6-phosphate catabolic process in which, coupled to NADPH synthesis, glucose-6-P is oxidized with the formation of carbon dioxide (CO2) and ribulose 5-phosphate; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses.

ISS|TAS

BP

GO:0009051

pentose-phosphate shunt, oxidative branch

The branch of the pentose-phosphate shunt which involves the oxidation of glucose 6-P and produces ribulose 5-P, reduced NADP+ and carbon dioxide (CO2).

IDA

BP

GO:0019322

pentose biosynthetic process

The chemical reactions and pathways resulting in the formation of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.

IEA

BP

GO:0019521

D-gluconate metabolic process

The chemical reactions and pathways involving D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.

IEA

BP

GO:0055114

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

IDA

CC

GO:0005634

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

IDA

CC

GO:0005829

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

TAS

CC

GO:0070062

extracellular exosome

A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

IDA

MF

GO:0004616

phosphogluconate dehydrogenase (decarboxylating) activity

Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+.

EXP|ISS

Domain ID Description

IPR006113

6-phosphogluconate dehydrogenase, decarboxylating

IPR006114

6-phosphogluconate dehydrogenase, C-terminal

IPR006115

6-phosphogluconate dehydrogenase, NADP-binding

IPR006183

6-phosphogluconate dehydrogenase

IPR006184

6-phosphogluconate-binding site

IPR008927

6-phosphogluconate dehydrogenase C-terminal domain-like

IPR013328

6-phosphogluconate dehydrogenase, domain 2

IPR016040

NAD(P)-binding domain

Pathway ID Pathway Term Pathway Source

hsa00030

Pentose phosphate pathway

KEGG

hsa00480

Glutathione metabolism

KEGG

hsa01100

Metabolic pathways

KEGG

hsa01200

Carbon metabolism

KEGG

WP134

Pentose Phosphate Pathway

WikiPathways

WP2884

NRF2 pathway

WikiPathways

UMLS CUI UMLS Term

C2239176

Liver Carcinoma

Tissue Cell Type

bone marrow

hematopoietic cells

esophagus

squamous epithelial cells

gallbladder

glandular cells

ovary

follicle cells

placenta

decidual cells

spleen

cells in red pulp

testis

cells in seminiferous ducts

tonsil

squamous epithelial cells

No databases found.

Pubmed ID Author Year Title

12734205

Wood et al.

2003

The Molecular Phenotype of Polycystic Ovary Syndrome (PCOS) Theca Cells and New Candidate PCOS Genes Defined by Microarray Analysis

Gene Symbol Entrez ID Uniprot ID Score

FABP5

2171

Q01469

0.49

GDI1

2664

P31150

0.49

P4HB

5034

P07237

0.49

SUMO3

6612

P55854

0.49

TALDO1

6888

P37837

0.56

ALDH9A1

223

P49189

0.63

ALDH7A1

501

P49419

0.63

CDK4

1019

P11802

0.63

GLA

2717

P06280

0.63

GNAI3

2773

P08754

0.63

HMGB2

3148

P26583

0.63

RPS6KA1

6195

Q15418

0.63

UNC13A

23025

Q9UPW8

0.63

TXNDC5

81567

Q8NBS9

0.63

EEF2

1938

P13639

0.70

CTSL

1514

P07711

0.49

MSN

4478

P26038

0.49

NCBP1

4686

Q09161

0.49

RDX

5962

P35241

0.49

TAGLN

6876

Q01995

0.49

UCHL3

7347

P15374

0.49

EZR

7430

P15311

0.49

ACAA2

10449

P42765

0.49

ISYNA1

51477

Q9NPH2

0.49

CDV3

55573

Q9UKY7

0.49

ARF6

382

P62330

0.63

CDK2

1017

P24941

0.63

GBE1

2632

Q04446

0.63

PDIA3

2923

P30101

0.63

HLA-B

3106

P30480

0.63

LDHA

3939

P00338

0.63

LDHB

3945

P07195

0.63

MOV10

4343

Q9HCE1

0.63

MYC

4609

P01106

0.63

NEDD8

4738

Q15843

0.63

PRKAB1

5564

Q9Y478

0.63

SORD

6652

Q00796

0.63

TCEA1

6917

P23193

0.63

TGM2

7052

P21980

0.63

THOP1

7064

P52888

0.63

TRAF6

7189

Q9Y4K3

0.63

SUMO1

7341

P63165

0.63

EIF4H

7458

Q15056

0.63

YWHAB

7529

P31946

0.63

YWHAG

7532

P61981

0.63

ISG15

9636

P05161

0.63

IKBKE

9641

Q14164

0.63

NDRG1

10397

Q92597

0.63

NXF1

10482

Q9UBU9

0.63

AHSA1

10598

O95433

0.63

YWHAQ

10971

P27348

0.63

CHORDC1

26973

Q9UHD1

0.63

LSM8

51691

O95777

0.63

WWOX

51741

Q9NZC7

0.63

C12orf10

60314

Q9HB07

0.63

G6PD

2539

P11413

0.70

OFD1

8481

O75665

0.72

IQCB1

9657

Q15051

0.72

RBM8A

9939

Q9Y5S9

0.72

CEP290

80184

O15078

0.72

TERF1

7013

P54274

0.73

SUMO2

6613

P61956

0.74

USPL1

10208

Q5W0Q7

0.76