| Gene Symbol | PBX1 |
| Entrez ID | 5087 |
| Uniprot ID | P40424 |
| Description | pre-B-cell leukemia homeobox 1 |
| Chromosomal Location | chr1: 164,555,584-164,899,296 |
| Ontology | GO ID | GO Term | Definition | Evidence |
|---|---|---|---|---|
|
BP |
GO:0001658 |
branching involved in ureteric bud morphogenesis |
The process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules. |
IEA |
|
BP |
GO:0006366 |
transcription from RNA polymerase II promoter |
The synthesis of RNA from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs). |
IEA |
|
BP |
GO:0006694 |
steroid biosynthetic process |
The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification. |
IEA |
|
BP |
GO:0007548 |
sex differentiation |
The establishment of the sex of an organism by physical differentiation. |
IEA |
|
BP |
GO:0008284 |
positive regulation of cell proliferation |
Any process that activates or increases the rate or extent of cell proliferation. |
IEA |
|
BP |
GO:0009952 |
anterior/posterior pattern specification |
The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism. |
IEA |
|
BP |
GO:0009954 |
proximal/distal pattern formation |
The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end). |
IEA |
|
BP |
GO:0010971 |
positive regulation of G2/M transition of mitotic cell cycle |
Any process that increases the rate or extent of progression from G2 phase to M phase of the mitotic cell cycle. |
IEA |
|
BP |
GO:0030278 |
regulation of ossification |
Any process that modulates the frequency, rate or extent of bone formation. |
IEA |
|
BP |
GO:0030325 |
adrenal gland development |
The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells. |
IEA |
|
BP |
GO:0030326 |
embryonic limb morphogenesis |
The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping. |
IEA |
|
BP |
GO:0035019 |
somatic stem cell population maintenance |
Any process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line. |
TAS |
|
BP |
GO:0035162 |
embryonic hemopoiesis |
The stages of blood cell formation that take place within the embryo. |
IEA |
|
BP |
GO:0045665 |
negative regulation of neuron differentiation |
Any process that stops, prevents, or reduces the frequency, rate or extent of neuron differentiation. |
IEA |
|
BP |
GO:0045944 |
positive regulation of transcription from RNA polymerase II promoter |
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. |
IEA |
|
BP |
GO:0048536 |
spleen development |
The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions. |
IEA |
|
BP |
GO:0048538 |
thymus development |
The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components. |
IEA |
|
BP |
GO:0048706 |
embryonic skeletal system development |
The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. |
IEA |
|
CC |
GO:0005634 |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
IDA |
|
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
TAS |
|
CC |
GO:0005667 |
transcription factor complex |
A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription. |
IEA |
|
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
|
MF |
GO:0000978 |
RNA polymerase II core promoter proximal region sequence-specific DNA binding |
Interacting selectively and non-covalently with a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II. |
IEA |
|
MF |
GO:0001077 |
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding |
Interacting selectively and non-covalently with a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II (RNAP II) in order to activate or increase the frequency, rate or extent of transcription from the RNAP II promoter. |
IEA |
|
MF |
GO:0003677 |
DNA binding |
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
IDA |
|
MF |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex. |
NAS |
|
MF |
GO:0005515 |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IPI |
|
MF |
GO:0046982 |
protein heterodimerization activity |
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer. |
IEA |
| Domain ID | Description |
|---|---|
|
IPR001356 |
Homeobox domain |
|
IPR005542 |
PBX |
|
IPR009057 |
Homeobox domain-like |
|
IPR017970 |
Homeobox, conserved site |
| Pathway ID | Pathway Term | Pathway Source |
|---|---|---|
|
hsa05202 |
Transcriptional misregulation in cancer |
KEGG |
|
WP706 |
Sudden Infant Death Syndrome (SIDS) Susceptibility Pathways |
WikiPathways |
|
WP2857 |
Mesodermal Commitment Pathway |
WikiPathways |
|
WP3527 |
Preimplantation Embryo |
WikiPathways |
|
WP2853 |
Endoderm Differentiation |
WikiPathways |
| UMLS CUI | UMLS Term |
|---|---|
|
C0006413 |
Burkitt Lymphoma |
|
C0236969 |
Substance-Related Disorders |
| Tissue | Cell Type |
|---|---|
|
adrenal gland |
glandular cells |
|
cerebellum |
cells in molecular layer |
|
cervix, uterine |
glandular cells |
|
endometrium |
cells in endometrial stroma |
|
fallopian tube |
glandular cells |
|
hippocampus |
neuronal cells |
|
nasopharynx |
respiratory epithelial cells |
|
ovary |
ovarian stroma cells |
|
pancreas |
exocrine glandular cells |
|
parathyroid gland |
glandular cells |
|
placenta |
decidual cells |
|
salivary gland |
glandular cells |
|
smooth muscle |
smooth muscle cells |
|
thyroid gland |
glandular cells |
|
urinary bladder |
urothelial cells |
|
vagina |
squamous epithelial cells |
| Pubmed ID | Author | Year | Title |
|---|---|---|---|
|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
| Gene Symbol | Entrez ID | Uniprot ID | Score |
|---|---|---|---|
|
UCHL3 |
7347 |
P15374 |
0.49 |
|
HOXA5 |
3202 |
P20719 |
0.52 |
|
HOXD10 |
3236 |
P28358 |
0.52 |
|
PAX6 |
5080 |
P26367 |
0.52 |
|
PDX1 |
3651 |
P52945 |
0.56 |
|
MDM2 |
4193 |
Q00987 |
0.59 |
|
HOXC8 |
3224 |
P31273 |
0.63 |
|
SIN3B |
23309 |
O75182 |
0.63 |
|
KAT2A |
2648 |
Q92830 |
0.68 |
|
HOXA10 |
3206 |
P31260 |
0.69 |
|
TLX1 |
3195 |
P31314 |
0.72 |
|
NR3C1 |
2908 |
P04150 |
0.73 |
|
HOXB8 |
3218 |
P17481 |
0.75 |
|
HOXD9 |
3235 |
P28356 |
0.75 |
|
HOXD4 |
3233 |
P09016 |
0.76 |
|
HOXB7 |
3217 |
P09629 |
0.77 |
|
MYH10 |
4628 |
P35580 |
0.77 |
|
HOXB1 |
3211 |
P14653 |
0.89 |
|
PKNOX1 |
5316 |
P55347 |
0.89 |
|
MEIS1 |
4211 |
O00470 |
0.99 |
|
CREBBP |
1387 |
Q92793 |
0.56 |
|
POU2F1 |
5451 |
P14859 |
0.56 |
|
SMARCD3 |
6604 |
Q6STE5 |
0.59 |
|
ELAVL1 |
1994 |
Q15717 |
0.63 |
|
HDAC1 |
3065 |
Q13547 |
0.63 |
|
HOXA1 |
3198 |
P49639 |
0.63 |
|
LMX1B |
4010 |
O60663 |
0.63 |
|
MAB21L1 |
4081 |
Q13394 |
0.63 |
|
MAGEA1 |
4100 |
P43355 |
0.63 |
|
MYOD1 |
4654 |
P15172 |
0.63 |
|
PBX2 |
5089 |
P40425 |
0.63 |
|
SMARCA4 |
6597 |
P51532 |
0.63 |
|
HDAC3 |
8841 |
O15379 |
0.63 |
|
MAB21L2 |
10586 |
Q9Y586 |
0.63 |
|
NEDD4L |
23327 |
Q96PU5 |
0.63 |
|
FOXE1 |
2304 |
O00358 |
0.72 |
|
FOXA1 |
3169 |
P55317 |
0.72 |
|
RBPJ |
3516 |
Q06330 |
0.72 |
|
FOXQ1 |
94234 |
Q9C009 |
0.72 |
|
FOXC1 |
2296 |
Q12948 |
0.88 |
|
HOXA9 |
3205 |
P31269 |
0.92 |
|
MEIS2 |
4212 |
O14770 |
0.97 |