Protein Description

Gene Symbol PBX1
Entrez ID 5087
Uniprot ID P40424
Description pre-B-cell leukemia homeobox 1
Chromosomal Location chr1: 164,555,584-164,899,296
Ontology GO ID GO Term Definition Evidence

BP

GO:0001658

branching involved in ureteric bud morphogenesis

The process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.

IEA

BP

GO:0006366

transcription from RNA polymerase II promoter

The synthesis of RNA from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).

IEA

BP

GO:0006694

steroid biosynthetic process

The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification.

IEA

BP

GO:0007548

sex differentiation

The establishment of the sex of an organism by physical differentiation.

IEA

BP

GO:0008284

positive regulation of cell proliferation

Any process that activates or increases the rate or extent of cell proliferation.

IEA

BP

GO:0009952

anterior/posterior pattern specification

The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.

IEA

BP

GO:0009954

proximal/distal pattern formation

The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end).

IEA

BP

GO:0010971

positive regulation of G2/M transition of mitotic cell cycle

Any process that increases the rate or extent of progression from G2 phase to M phase of the mitotic cell cycle.

IEA

BP

GO:0030278

regulation of ossification

Any process that modulates the frequency, rate or extent of bone formation.

IEA

BP

GO:0030325

adrenal gland development

The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells.

IEA

BP

GO:0030326

embryonic limb morphogenesis

The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping.

IEA

BP

GO:0035019

somatic stem cell population maintenance

Any process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line.

TAS

BP

GO:0035162

embryonic hemopoiesis

The stages of blood cell formation that take place within the embryo.

IEA

BP

GO:0045665

negative regulation of neuron differentiation

Any process that stops, prevents, or reduces the frequency, rate or extent of neuron differentiation.

IEA

BP

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.

IEA

BP

GO:0048536

spleen development

The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions.

IEA

BP

GO:0048538

thymus development

The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components.

IEA

BP

GO:0048706

embryonic skeletal system development

The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure.

IEA

CC

GO:0005634

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

IDA

CC

GO:0005654

nucleoplasm

That part of the nuclear content other than the chromosomes or the nucleolus.

TAS

CC

GO:0005667

transcription factor complex

A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription.

IEA

CC

GO:0005737

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

IDA

MF

GO:0000978

RNA polymerase II core promoter proximal region sequence-specific DNA binding

Interacting selectively and non-covalently with a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II.

IEA

MF

GO:0001077

transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding

Interacting selectively and non-covalently with a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II (RNAP II) in order to activate or increase the frequency, rate or extent of transcription from the RNAP II promoter.

IEA

MF

GO:0003677

DNA binding

Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

IDA

MF

GO:0003700

transcription factor activity, sequence-specific DNA binding

Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.

NAS

MF

GO:0005515

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

IPI

MF

GO:0046982

protein heterodimerization activity

Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.

IEA

Domain ID Description

IPR001356

Homeobox domain

IPR005542

PBX

IPR009057

Homeobox domain-like

IPR017970

Homeobox, conserved site

Pathway ID Pathway Term Pathway Source

hsa05202

Transcriptional misregulation in cancer

KEGG

WP706

Sudden Infant Death Syndrome (SIDS) Susceptibility Pathways

WikiPathways

WP2857

Mesodermal Commitment Pathway

WikiPathways

WP3527

Preimplantation Embryo

WikiPathways

WP2853

Endoderm Differentiation

WikiPathways

UMLS CUI UMLS Term

C0006413

Burkitt Lymphoma

C0236969

Substance-Related Disorders

Tissue Cell Type

adrenal gland

glandular cells

cerebellum

cells in molecular layer

cervix, uterine

glandular cells

endometrium

cells in endometrial stroma

fallopian tube

glandular cells

hippocampus

neuronal cells

nasopharynx

respiratory epithelial cells

ovary

ovarian stroma cells

pancreas

exocrine glandular cells

parathyroid gland

glandular cells

placenta

decidual cells

salivary gland

glandular cells

smooth muscle

smooth muscle cells

thyroid gland

glandular cells

urinary bladder

urothelial cells

vagina

squamous epithelial cells

No databases found.

Pubmed ID Author Year Title

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

22951915

Haozi et al.

2012

Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome

Gene Symbol Entrez ID Uniprot ID Score

UCHL3

7347

P15374

0.49

HOXA5

3202

P20719

0.52

HOXD10

3236

P28358

0.52

PAX6

5080

P26367

0.52

PDX1

3651

P52945

0.56

MDM2

4193

Q00987

0.59

HOXC8

3224

P31273

0.63

SIN3B

23309

O75182

0.63

KAT2A

2648

Q92830

0.68

HOXA10

3206

P31260

0.69

TLX1

3195

P31314

0.72

NR3C1

2908

P04150

0.73

HOXB8

3218

P17481

0.75

HOXD9

3235

P28356

0.75

HOXD4

3233

P09016

0.76

HOXB7

3217

P09629

0.77

MYH10

4628

P35580

0.77

HOXB1

3211

P14653

0.89

PKNOX1

5316

P55347

0.89

MEIS1

4211

O00470

0.99

CREBBP

1387

Q92793

0.56

POU2F1

5451

P14859

0.56

SMARCD3

6604

Q6STE5

0.59

ELAVL1

1994

Q15717

0.63

HDAC1

3065

Q13547

0.63

HOXA1

3198

P49639

0.63

LMX1B

4010

O60663

0.63

MAB21L1

4081

Q13394

0.63

MAGEA1

4100

P43355

0.63

MYOD1

4654

P15172

0.63

PBX2

5089

P40425

0.63

SMARCA4

6597

P51532

0.63

HDAC3

8841

O15379

0.63

MAB21L2

10586

Q9Y586

0.63

NEDD4L

23327

Q96PU5

0.63

FOXE1

2304

O00358

0.72

FOXA1

3169

P55317

0.72

RBPJ

3516

Q06330

0.72

FOXQ1

94234

Q9C009

0.72

FOXC1

2296

Q12948

0.88

HOXA9

3205

P31269

0.92

MEIS2

4212

O14770

0.97