Protein Description

Gene Symbol NFKB1
Entrez ID 4790
Uniprot ID P19838
Description nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
Chromosomal Location chr4: 102,501,329-102,617,302
Ontology GO ID GO Term Definition Evidence

BP

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.

IC|IGI|IMP

BP

GO:0002223

stimulatory C-type lectin receptor signaling pathway

Any series of molecular signals generated as a consequence of binding to a C-type lectin receptor capable of cellular activation.

TAS

BP

GO:0006366

transcription from RNA polymerase II promoter

The synthesis of RNA from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).

TAS

BP

GO:0006915

apoptotic process

A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.

IEA

BP

GO:0006954

inflammatory response

The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.

TAS

BP

GO:0007249

I-kappaB kinase/NF-kappaB signaling

The process in which a signal is passed on to downstream components within the cell through the I-kappaB-kinase (IKK)-dependent activation of NF-kappaB. The cascade begins with activation of a trimeric IKK complex (consisting of catalytic kinase subunits IKKalpha and/or IKKbeta, and the regulatory scaffold protein NEMO) and ends with the regulation of transcription of target genes by NF-kappaB. In a resting state, NF-kappaB dimers are bound to I-kappaB proteins, sequestering NF-kappaB in the cytoplasm. Phosphorylation of I-kappaB targets I-kappaB for ubiquitination and proteasomal degradation, thus releasing the NF-kappaB dimers, which can translocate to the nucleus to bind DNA and regulate transcription.

IBA

BP

GO:0010629

negative regulation of gene expression

Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.

IDA

BP

GO:0010744

positive regulation of macrophage derived foam cell differentiation

Any process that increases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.

IC

BP

GO:0010884

positive regulation of lipid storage

Any process that increases the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.

IC

BP

GO:0010956

negative regulation of calcidiol 1-monooxygenase activity

Any process that decreases the rate, frequency or extent of calcidiol 1-monooxygenase activity. Calcidiol 1-monooxygenase activity is the catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O.

IDA

BP

GO:0010957

negative regulation of vitamin D biosynthetic process

Any process that decreases the rate, frequency or extent of a vitamin D biosynthetic process. Vitamin D biosynthesis is the chemical reactions and pathways resulting in the formation of vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).

IC

BP

GO:0031293

membrane protein intracellular domain proteolysis

The proteolytic cleavage of a transmembrane protein leading to the release of an intracellular domain.

TAS

BP

GO:0032269

negative regulation of cellular protein metabolic process

Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a protein, occurring at the level of an individual cell.

IC

BP

GO:0032375

negative regulation of cholesterol transport

Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

IC

BP

GO:0032481

positive regulation of type I interferon production

Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.

TAS

BP

GO:0035994

response to muscle stretch

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a myofibril being extended beyond its slack length.

IEA

BP

GO:0038061

NIK/NF-kappaB signaling

The process in which a signal is passed on to downstream components within the cell through the NIK-dependent processing and activation of NF-KappaB. Begins with activation of the NF-KappaB-inducing kinase (NIK), which in turn phosphorylates and activates IkappaB kinase alpha (IKKalpha). IKKalpha phosphorylates the NF-Kappa B2 protein (p100) leading to p100 processing and release of an active NF-KappaB (p52).

IBA

BP

GO:0038095

Fc-epsilon receptor signaling pathway

A series of molecular signals initiated by the binding of the Fc portion of immunoglobulin E (IgE) to an Fc-epsilon receptor on the surface of a signal-receiving cell, and ending with regulation of a downstream cellular process, e.g. transcription. The Fc portion of an immunoglobulin is its C-terminal constant region.

TAS

BP

GO:0043066

negative regulation of apoptotic process

Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.

TAS

BP

GO:0045083

negative regulation of interleukin-12 biosynthetic process

Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12.

IEA

BP

GO:0045087

innate immune response

Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.

IBA

BP

GO:0045893

positive regulation of transcription, DNA-templated

Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.

IDA|IMP|NAS

BP

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.

IDA|IMP

BP

GO:0050728

negative regulation of inflammatory response

Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response.

IEA

BP

GO:0050852

T cell receptor signaling pathway

A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell.

TAS

BP

GO:0051092

positive regulation of NF-kappaB transcription factor activity

Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB.

TAS

BP

GO:0051403

stress-activated MAPK cascade

A series of molecular signals in which a stress-activated MAP kinase cascade relays one or more of the signals; MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase.

TAS

BP

GO:0071222

cellular response to lipopolysaccharide

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.

IMP

BP

GO:0071260

cellular response to mechanical stimulus

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.

IEP

BP

GO:0071316

cellular response to nicotine

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus.

IMP

BP

GO:0071347

cellular response to interleukin-1

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus.

IEP

BP

GO:0071354

cellular response to interleukin-6

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-6 stimulus.

IMP

BP

GO:0071359

cellular response to dsRNA

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.

IEA

BP

GO:0071375

cellular response to peptide hormone stimulus

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals.

IMP

BP

GO:0090263

positive regulation of canonical Wnt signaling pathway

Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.

IMP

BP

GO:1900127

positive regulation of hyaluronan biosynthetic process

Any process that activates or increases the frequency, rate or extent of hyaluronan biosynthetic process.

IDA

BP

GO:2000630

positive regulation of miRNA metabolic process

Any process that activates or increases the frequency, rate or extent of miRNA metabolic process.

IMP

CC

GO:0005634

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

IDA

CC

GO:0005654

nucleoplasm

That part of the nuclear content other than the chromosomes or the nucleolus.

IDA|TAS

CC

GO:0005737

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

IDA

CC

GO:0005739

mitochondrion

A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

IDA

CC

GO:0005829

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

IBA|TAS

CC

GO:0033256

I-kappaB/NF-kappaB complex

A protein complex containing an inhibitory-kappaB (I-kappaB/IKB) protein and one or more copies of an NF-kappaB protein. In the resting state, NF-kappaB dimers are bound to I-kappaB proteins, sequestering NF-kappaB in the cytoplasm.

TAS

MF

GO:0000975

regulatory region DNA binding

Interacting selectively and non-covalently with a DNA region that regulates a DNA-based process. Such processes include transcription, DNA replication, and DNA repair.

IDA

MF

GO:0000976

transcription regulatory region sequence-specific DNA binding

Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.

IDA

MF

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.

IDA

MF

GO:0000980

RNA polymerase II distal enhancer sequence-specific DNA binding

Interacting selectively and non-covalently with a RNA polymerase II (Pol II) distal enhancer. In mammalian cells, enhancers are distal sequences that increase the utilization of some promoters, and can function in either orientation and in any location (upstream or downstream) relative to the core promoter.

IDA

MF

GO:0001205

transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding

Interacting selectively and non-covalently with a sequence of DNA that is in a distal enhancer region for RNA polymerase II (RNAP II) in order to activate or increase the frequency, rate or extent of transcription from the RNAP II promoter.

IDA

MF

GO:0001227

transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding

Interacting selectively and non-covalently with a sequence of DNA that is in the regulatory region for RNA polymerase II (RNAP II) in order to stop, prevent, or reduce the frequency, rate or extent of transcription from an RNA polymerase II promoter.

IDA

MF

GO:0003682

chromatin binding

Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.

IBA

MF

GO:0003700

transcription factor activity, sequence-specific DNA binding

Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.

IDA

MF

GO:0005515

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

IPI

MF

GO:0008134

transcription factor binding

Interacting selectively and non-covalently with a transcription factor, any protein required to initiate or regulate transcription.

IDA

MF

GO:0042802

identical protein binding

Interacting selectively and non-covalently with an identical protein or proteins.

IPI

MF

GO:0042803

protein homodimerization activity

Interacting selectively and non-covalently with an identical protein to form a homodimer.

IEA

MF

GO:0042805

actinin binding

Interacting selectively and non-covalently with actinin, any member of a family of proteins that crosslink F-actin.

IPI

MF

GO:0044212

transcription regulatory region DNA binding

Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.

IDA

MF

GO:0046982

protein heterodimerization activity

Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.

IDA

Domain ID Description

IPR000451

NF-kappa-B/Dorsal

IPR000488

Death domain

IPR002110

Ankyrin repeat

IPR002909

IPT domain

IPR008967

p53-like transcription factor, DNA-binding

IPR011029

Death-like domain

IPR011539

Rel homology domain (RHD), DNA-binding domain

IPR013783

Immunoglobulin-like fold

IPR014756

Immunoglobulin E-set

IPR020683

Ankyrin repeat-containing domain

IPR030492

Rel homology domain, conserved site

IPR030503

Nuclear factor NF-kappa-B, p105 subunit

IPR032397

Rel homology dimerisation domain

IPR033926

NFkappaB IPT domain

Pathway ID Pathway Term Pathway Source

hsa01523

Antifolate resistance

KEGG

hsa04010

MAPK signaling pathway

KEGG

hsa04014

Ras signaling pathway

KEGG

hsa04024

cAMP signaling pathway

KEGG

hsa04062

Chemokine signaling pathway

KEGG

hsa04064

NF-kappa B signaling pathway

KEGG

hsa04066

HIF-1 signaling pathway

KEGG

hsa04071

Sphingolipid signaling pathway

KEGG

hsa04151

PI3K-Akt signaling pathway

KEGG

hsa04210

Apoptosis

KEGG

hsa04211

Longevity regulating pathway

KEGG

hsa04380

Osteoclast differentiation

KEGG

hsa04620

Toll-like receptor signaling pathway

KEGG

hsa04621

NOD-like receptor signaling pathway

KEGG

hsa04622

RIG-I-like receptor signaling pathway

KEGG

hsa04623

Cytosolic DNA-sensing pathway

KEGG

hsa04657

IL-17 signaling pathway

KEGG

hsa04658

Th1 and Th2 cell differentiation

KEGG

hsa04659

Th17 cell differentiation

KEGG

hsa04660

T cell receptor signaling pathway

KEGG

hsa04662

B cell receptor signaling pathway

KEGG

hsa04668

TNF signaling pathway

KEGG

hsa04722

Neurotrophin signaling pathway

KEGG

hsa04917

Prolactin signaling pathway

KEGG

hsa04920

Adipocytokine signaling pathway

KEGG

hsa04931

Insulin resistance

KEGG

hsa04932

Non-alcoholic fatty liver disease (NAFLD)

KEGG

hsa04933

AGE-RAGE signaling pathway in diabetic complications

KEGG

hsa05030

Cocaine addiction

KEGG

hsa05120

Epithelial cell signaling in Helicobacter pylori infection

KEGG

hsa05131

Shigellosis

KEGG

hsa05132

Salmonella infection

KEGG

hsa05133

Pertussis

KEGG

hsa05134

Legionellosis

KEGG

hsa05140

Leishmaniasis

KEGG

hsa05142

Chagas disease (American trypanosomiasis)

KEGG

hsa05145

Toxoplasmosis

KEGG

hsa05146

Amoebiasis

KEGG

hsa05152

Tuberculosis

KEGG

hsa05160

Hepatitis C

KEGG

hsa05161

Hepatitis B

KEGG

hsa05162

Measles

KEGG

hsa05164

Influenza A

KEGG

hsa05166

HTLV-I infection

KEGG

hsa05168

Herpes simplex infection

KEGG

hsa05169

Epstein-Barr virus infection

KEGG

hsa05200

Pathways in cancer

KEGG

hsa05202

Transcriptional misregulation in cancer

KEGG

hsa05203

Viral carcinogenesis

KEGG

hsa05206

MicroRNAs in cancer

KEGG

hsa05212

Pancreatic cancer

KEGG

hsa05215

Prostate cancer

KEGG

hsa05220

Chronic myeloid leukemia

KEGG

hsa05221

Acute myeloid leukemia

KEGG

hsa05222

Small cell lung cancer

KEGG

hsa05321

Inflammatory bowel disease (IBD)

KEGG

hsa05418

Fluid shear stress and atherosclerosis

KEGG

WP23

B Cell Receptor Signaling Pathway

WikiPathways

WP1533

Vitamin B12 Metabolism

WikiPathways

WP3941

Oxidative Damage

WikiPathways

WP195

IL-1 signaling pathway

WikiPathways

WP560

TGF-beta Receptor Signaling

WikiPathways

WP1984

Integrated Breast Cancer Pathway

WikiPathways

WP706

Sudden Infant Death Syndrome (SIDS) Susceptibility Pathways

WikiPathways

WP15

Selenium Micronutrient Network

WikiPathways

WP2865

IL1 and megakaryocytes in obesity

WikiPathways

WP3929

Chemokine signaling pathway

WikiPathways

WP262

EBV LMP1 signaling

WikiPathways

WP3646

Hepatitis C and Hepatocellular Carcinoma

WikiPathways

WP3298

Melatonin metabolism and effects

WikiPathways

WP2324

AGE/RAGE pathway

WikiPathways

WP3863

T-Cell antigen Receptor (TCR) pathway during Staphylococcus aureus infection

WikiPathways

WP1559

TFs Regulate miRNAs related to cardiac hypertrophy

WikiPathways

WP75

Toll-like Receptor Signaling Pathway

WikiPathways

WP3630

NAD metabolism, sirtuins and aging

WikiPathways

WP2355

Corticotropin-releasing hormone signaling pathway

WikiPathways

WP2064

Neural Crest Differentiation

WikiPathways

WP384

Apoptosis Modulation by HSP70

WikiPathways

WP2036

TNF related weak inducer of apoptosis (TWEAK) Signaling Pathway

WikiPathways

WP3303

Rac1/Pak1/p38/MMP-2 pathway

WikiPathways

WP289

Myometrial Relaxation and Contraction Pathways

WikiPathways

WP3877

Simplified Depiction of MYD88 Distinct Input-Output Pathway

WikiPathways

WP2034

Leptin signaling pathway

WikiPathways

WP710

DNA Damage Response (only ATM dependent)

WikiPathways

WP3878

ATM Signaling Network in Development and Disease

WikiPathways

WP3414

Initiation of transcription and translation elongation at the HIV-1 LTR

WikiPathways

WP3617

Photodynamic therapy-induced NF-kB survival signaling

WikiPathways

WP2435

Quercetin and Nf-kB/ AP-1 Induced Cell Apoptosis

WikiPathways

WP61

Notch Signaling Pathway

WikiPathways

WP2637

Structural Pathway of Interleukin 1 (IL-1)

WikiPathways

WP3849

MAPK and NFkB Signalling Pathways Inhibited by Yersinia YopJ

WikiPathways

WP28

Selenium Metabolism and Selenoproteins

WikiPathways

WP1449

Regulation of toll-like receptor signaling pathway

WikiPathways

WP2112

IL17 signaling pathway

WikiPathways

WP3851

TLR4 Signaling and Tolerance

WikiPathways

WP2374

Oncostatin M Signaling Pathway

WikiPathways

WP3850

Factors and pathways affecting insulin-like growth factor (IGF1)-Akt signaling

WikiPathways

WP3858

Toll-like Receptor Signaling

WikiPathways

WP3865

RIG-I-like Receptor Signaling

WikiPathways

WP382

MAPK Signaling Pathway

WikiPathways

WP2037

Prolactin Signaling Pathway

WikiPathways

WP1434

Osteopontin Signaling

WikiPathways

WP176

Folate Metabolism

WikiPathways

WP1544

MicroRNAs in cardiomyocyte hypertrophy

WikiPathways

WP2583

T-Cell Receptor and Co-stimulatory Signaling

WikiPathways

WP408

Oxidative Stress

WikiPathways

WP254

Apoptosis

WikiPathways

WP2586

Aryl Hydrocarbon Receptor

WikiPathways

WP231

TNF alpha Signaling Pathway

WikiPathways

WP1772

Apoptosis Modulation and Signaling

WikiPathways

WP2018

RANKL/RANK (Receptor activator of NFKB (ligand)) Signaling Pathway

WikiPathways

WP712

Estrogen signaling pathway

WikiPathways

WP2795

Cardiac Hypertrophic Response

WikiPathways

WP2864

Apoptosis-related network due to altered Notch3 in ovarian cancer

WikiPathways

WP2380

Brain-Derived Neurotrophic Factor (BDNF) signaling pathway

WikiPathways

WP395

IL-4 Signaling Pathway

WikiPathways

WP69

T-Cell antigen Receptor (TCR) Signaling Pathway

WikiPathways

WP3888

VEGFA-VEGFR2 Signaling Pathway

WikiPathways

h_RELAPathway

Acetylation and Deacetylation of RelA in The Nucleus

BioCarta

h_pkcPathway

Activation of PKC through G protein coupled receptor

BioCarta

h_aktPathway

AKT Signaling Pathway

BioCarta

h_atmPathway

ATM Signaling Pathway

BioCarta

h_ranklPathway

Bone Remodelling

BioCarta

h_cdMacPathway

Cadmium induces DNA synthesis and proliferation in macrophages

BioCarta

h_cd40Pathway

CD40L Signaling Pathway

BioCarta

h_ceramidePathway

Ceramide Signaling Pathway

BioCarta

h_tidPathway

Chaperones modulate interferon Signaling Pathway

BioCarta

h_gcrPathway

Corticosteroids and cardioprotection

BioCarta

h_cxcr4Pathway

CXCR4 Signaling Pathway

BioCarta

h_rnaPathway

Double Stranded RNA Induced Gene Expression

BioCarta

h_eponfkbPathway

Erythropoietin mediated neuroprotection through NF-kB

BioCarta

h_fMLPpathway

fMLP induced chemokine gene expression in HMC-1 cells

BioCarta

h_freePathway

Free Radical Induced Apoptosis

BioCarta

h_HivnefPathway

HIV-I Nef: negative effector of Fas and TNF

BioCarta

h_hcmvPathway

Human Cytomegalovirus and Map Kinase Pathways

BioCarta

h_gsk3Pathway

Inactivation of Gsk3 by AKT causes accumulation of b-catenin in Alveolar Macrophages

BioCarta

h_deathPathway

Induction of apoptosis through DR3 and DR4/5 Death Receptors

BioCarta

h_RacCycDPathway

Influence of Ras and Rho proteins on G1 to S Transition

BioCarta

h_keratinocytePathway

Keratinocyte Differentiation

BioCarta

h_mapkPathway

MAPKinase Signaling Pathway

BioCarta

h_vipPathway

Neuropeptides VIP and PACAP inhibit the apoptosis of activated T cells

BioCarta

h_nthiPathway

NFkB activation by Nontypeable Hemophilus influenzae

BioCarta

h_nfkbPathway

NF-kB Signaling Pathway

BioCarta

h_rasPathway

Ras Signaling Pathway

BioCarta

h_cardiacegfPathway

Role of EGF Receptor Transactivation by GPCRs in Cardiac Hypertrophy

BioCarta

h_il1rPathway

Signal transduction through IL1R

BioCarta

h_tcrPathway

T Cell Receptor Signaling Pathway

BioCarta

h_tall1Pathway

TACI and BCMA stimulation of B cell immune responses

BioCarta

h_41bbPathway

The 4-1BB-dependent immune response

BioCarta

h_pcafpathway

The information-processing pathway at the IFN-beta enhancer

BioCarta

h_stressPathway

TNF/Stress Related Signaling

BioCarta

h_tnfr2Pathway

TNFR2 Signaling Pathway

BioCarta

h_tollPathway

Toll-Like Receptor Pathway

BioCarta

UMLS CUI UMLS Term

C0001418

Adenocarcinoma

C0007621

Neoplastic Cell Transformation

C0007786

Brain Ischemia

C0009324

Ulcerative Colitis

C0009375

Colonic Neoplasms

C0009447

Common Variable Immunodeficiency

C0011860

Diabetes Mellitus, Non-Insulin-Dependent

C0018843

Heat Stroke

C0020500

Hyperoxaluria

C0022661

Kidney Failure, Chronic

C0023892

Biliary Cirrhosis

C0023895

Liver Diseases

C0029927

Ovarian Cysts

C0036341

Schizophrenia

Tissue Cell Type

bone marrow

hematopoietic cells

lymph node

germinal center cells

lymph node

non-germinal center cells

tonsil

germinal center cells

tonsil

non-germinal center cells

urinary bladder

urothelial cells

No databases found.

Pubmed ID Author Year Title

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

22951915

Haozi et al.

2012

Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome

Gene Symbol Entrez ID Uniprot ID Score

RBPJ

3516

Q06330

0.00

PIK3CA

5290

P42336

0.00

PIK3R1

5295

P27986

0.00

PLD1

5337

Q13393

0.00

PRKACG

5568

P22612

0.00

PRKCD

5580

Q05655

0.00

PRKCI

5584

P41743

0.00

PRKCZ

5590

Q05513

0.00

SRC

6714

P12931

0.00

TLR2

7097

O60603

0.00

TLR3

7098

O15455

0.00

TLR5

7100

O60602

0.00

VCAM1

7412

P19320

0.00

TRADD

8717

Q15628

0.00

RIPK2

8767

O43353

0.00

TNFRSF10B

8795

O14763

0.00

TNFRSF10A

8797

O00220

0.00

NOD2

64127

Q9HC29

0.00

APLP2

334

Q06481

0.49

ATP5J

522

P18859

0.49

ERCC6

2074

Q03468

0.49

PLS3

5358

P13797

0.49

SPTAN1

6709

Q13813

0.49

SPTBN1

6711

Q01082

0.49

DDX46

9879

Q7L014

0.49

VPS4A

27183

Q9UN37

0.49

SARAF

51669

Q96BY9

0.49

BIRC3

330

Q13489

0.52

IRF1

3659

P10914

0.52

CD82

3732

P27701

0.52

POLR2A

5430

P24928

0.52

UBE2D3

7323

P61077

0.52

IL2RA

3559

P01589

0.55

MPP6

51678

Q9NZW5

0.56

ACACA

31

Q13085

0.63

ACTA2

59

P62736

0.63

ACTB

60

P60709

0.63

ACTG1

71

P63261

0.63

ADSL

158

P30566

0.63

ALB

213

P02768

0.63

ALOX12B

242

O75342

0.63

ALPI

248

P09923

0.63

SLC25A4

291

P12235

0.63

ANXA1

301

P04083

0.63

ANXA2

302

P07355

0.63

APRT

353

P07741

0.63

ARF4

378

P18085

0.63

ATP1A1

476

P05023

0.63

ATP5A1

498

P25705

0.63

ATP5B

506

P06576

0.63

ATP5C1

509

P36542

0.63

AZGP1

563

P25311

0.63

BLMH

642

Q13867

0.63

BSG

682

P35613

0.63

C1QBP

708

Q07021

0.63

CAD

790

P27708

0.63

CALM2

805

P62158

0.63

CALM3

808

P62158

0.63

CAT

847

P04040

0.63

CDK1

983

P06493

0.63

CDSN

1041

Q15517

0.63

CFL1

1072

P23528

0.63

CHD3

1107

Q12873

0.63

CKB

1152

P12277

0.63

CLU

1191

P10909

0.63

CLTC

1213

Q00610

0.63

SLC25A10

1468

Q9UBX3

0.63

DBT

1629

P11182

0.63

DSP

1832

P15924

0.63

EEF1A1

1915

P68104

0.63

EEF1A2

1917

Q05639

0.63

EEF1D

1936

P29692

0.63

EEF1G

1937

P26641

0.63

EIF4A1

1973

P60842

0.63

ELAVL1

1994

Q15717

0.63

ENO1

2023

P06733

0.63

EPHA5

2044

P54756

0.63

FBL

2091

P22087

0.63

ETFA

2108

P13804

0.63

FARSA

2193

Q9Y285

0.63

FLNB

2317

O75369

0.63

GAPDH

2597

P04406

0.63

GNAS

2778

Q5JWF2

0.63

H1F0

3005

P07305

0.63

HIST1H1C

3006

P16403

0.63

HIST1H1B

3009

P16401

0.63

HIST1H2BB

3018

P33778

0.63

HIST1H1A

3024

Q02539

0.63

HDAC2

3066

Q92769

0.63

HK1

3098

P19367

0.63

HNRNPA2B1

3181

P22626

0.63

HNRNPF

3185

P52597

0.63

HNRNPH1

3187

P31943

0.63

HNRNPK

3190

P61978

0.63

HNRNPU

3192

Q00839

0.63

HOXC8

3224

P31273

0.63

HPRT1

3251

P00492

0.63

DNAJA1

3301

P31689

0.63

HSPA2

3306

P54652

0.63

HSP90AA1

3320

P07900

0.63

HSP90AB3P

3327

Q58FF7

0.63

HSPD1

3329

P10809

0.63

IGHA1

3493

P01876

0.63

JCHAIN

3512

P01591

0.63

IGKC

3514

P01834

0.63

IGLC2

3538

P0CG05

0.63

IMPDH2

3615

P12268

0.63

KPNA1

3836

P52294

0.63

KPNA2

3838

P52292

0.63

KPNA3

3840

O00505

0.63

LMNB1

4001

P20700

0.63

LYZ

4069

P61626

0.63

MCM7

4176

P33993

0.63

MSH2

4436

P43246

0.63

MTHFD1

4522

P11586

0.63

MYH9

4627

P35579

0.63

MYH10

4628

P35580

0.63

MYL6

4637

P60660

0.63

NDUFA10

4705

O95299

0.63

NPM1

4869

P06748

0.63

OAT

4942

P04181

0.63

PRDX1

5052

Q06830

0.63

PC

5091

P11498

0.63

PCBD1

5092

P61457

0.63

PCBP1

5093

Q15365

0.63

PCBP2

5094

Q15366

0.63

PCCA

5095

P05165

0.63

PCCB

5096

P05166

0.63

PCMT1

5110

P22061

0.63

PDHA1

5160

P08559

0.63

PDHB

5162

P11177

0.63

PFKP

5214

Q01813

0.63

SLC25A3

5250

Q00325

0.63

PIP

5304

P12273

0.63

PKM

5315

P14618

0.63

PRPH

5630

P41219

0.63

PRPS1

5631

P60891

0.63

PRPSAP2

5636

O60256

0.63

PRSS1

5644

P07477

0.63

PRSS3

5646

P35030

0.63

PSMC2

5701

P35998

0.63

PSMC3

5702

P17980

0.63

PSMD2

5708

Q13200

0.63

PTPRF

5792

P10586

0.63

RAN

5901

P62826

0.63

RPL11

6135

P62913

0.63

RPS3A

6189

P61247

0.63

RPS4X

6191

P62701

0.63

RPS8

6202

P62241

0.63

RPS10

6204

P46783

0.63

RPS14

6208

P62263

0.63

RPS15A

6210

P62244

0.63

RPS16

6217

P62249

0.63

RPS18

6222

P62269

0.63

RPS28

6234

P62857

0.63

SEMG1

6406

P04279

0.63

SEMG2

6407

Q02383

0.63

SLC1A5

6510

Q15758

0.63

SNRPB

6628

P14678

0.63

SPRR1A

6698

P35321

0.63

SSR1

6745

P43307

0.63

STAT5A

6776

P42229

0.63

TCP1

6950

P17987

0.63

PRDX2

7001

P32119

0.63

TFAM

7019

Q00059

0.63

TPR

7175

P12270

0.63

CCT3

7203

P49368

0.63

DNAJC7

7266

Q99615

0.63

TUBA4A

7277

P68366

0.63

TUBB2A

7280

Q13885

0.63

TUBG1

7283

P23258

0.63

TUFM

7284

P49411

0.63

UBA52

7311

P62987

0.63

UBE2L3

7332

P68036

0.63

UQCRC2

7385

P22695

0.63

VARS

7407

P26640

0.63

VCP

7415

P55072

0.63

VTN

7448

P04004

0.63

ZFP36

7538

P26651

0.63

TUBA1A

7846

Q71U36

0.63

ALDH5A1

7915

P51649

0.63

HSD17B8

7923

Q92506

0.63

HIST1H2BC; HIST1H2BE; HIST1H2BF; HIST1H2BG; HIST1H2BI

8339

P62807

0.63

TTF2

8458

Q9UNY4

0.63

IRS4

8471

O14654

0.63

SLC25A12

8604

O75746

0.63

DPM1

8813

O60762

0.63

DNAJA3

9093

Q96EY1

0.63

INA

9118

Q16352

0.63

AIFM1

9131

O95831

0.63

DDX21

9188

Q9NR30

0.63

VAPB

9217

O95292

0.63

VAPA

9218

Q9P0L0

0.63

NPEPPS

9520

P55786

0.63

BAG2

9532

O95816

0.63

ISG15

9636

P05161

0.63

MATR3

9782

P43243

0.63

CKAP5

9793

Q14008

0.63

RAD50

10111

Q92878

0.63

LRPPRC

10128

P42704

0.63

TRAP1

10131

Q12931

0.63

SLC25A13

10165

Q9UJS0

0.63

DDX39A

10212

O00148

0.63

MRPS31

10240

Q92665

0.63

STUB1

10273

Q9UNE7

0.63

TUBA1B

10376

P68363

0.63

TUBB3

10381

Q13509

0.63

TUBB4B

10383

P68371

0.63

RACK1

10399

P63244

0.63

SYNCRIP

10492

O60506

0.63

DDX17

10521

Q92841

0.63

CCT2

10576

P78371

0.63

AHSA1

10598

O95433

0.63

MYL12A

10627

P19105

0.63

RGS14

10636

O43566

0.63

IGF2BP1

10642

Q9NZI8

0.63

YWHAQ

10971

P27348

0.63

CEP162

22832

Q5TB80

0.63

TARDBP

23435

Q13148

0.63

FKBP8

23770

Q14318

0.63

DHRS7B

25979

Q6IAN0

0.63

RBMXL2

27288

O75526

0.63

RBMX

27316

P38159

0.63

C18orf8

29919

Q96DM3

0.63

GMPPA

29926

Q96IJ6

0.63

NSDHL

50814

Q15738

0.63

DIRAS2

54769

Q96HU8

0.63

NSUN2

54888

Q08J23

0.63

C4orf27

54969

Q9NWY4

0.63

RIF1

55183

Q5UIP0

0.63

ATAD3A

55210

Q9NVI7

0.63

C4orf19

55286

Q8IY42

0.63

NAGK

55577

Q9UJ70

0.63

MCCC1

56922

Q96RQ3

0.63

TOMM22

56993

Q9NS69

0.63

CCAR2

57805

Q8N163

0.63

MCCC2

64087

Q9HCC0

0.63

GGCT

79017

O75223

0.63

SLC25A22

79751

Q9H936

0.63

TUBB1

81027

Q9H4B7

0.63

SEH1L

81929

Q96EE3

0.63

FRMD8

83786

Q9BZ67

0.63

SLF1

84250

Q9BQI6

0.63

TUBB6

84617

Q9BUF5

0.63

TUBA1C

84790

Q9BQE3

0.63

NAV3

89795

Q8IVL0

0.63

TIMM50

92609

Q3ZCQ8

0.63

RPS10P5

93144

Q9NQ39

0.63

SFXN1

94081

Q9H9B4

0.63

HIST1H4A; HIST1H4B; HIST1H4C; HIST1H4D; HIST1H4E; HIST1H4F; HIST1H4H; HIST1H4I; HIST1H4J; HIST1H4K; HIST1H4L; HIST2H4A; HIST2H4B; HIST4H4

121504

P62805

0.63

SCLT1

132320

Q96NL6

0.63

RBBP8NL

140893

Q8NC74

0.63

A2ML1

144568

A8K2U0

0.63

ANKRD24

170961

Q8TF21

0.63

CEP112

201134

Q8N8E3

0.63

ZBTB9

221504

Q96C00

0.63

HIST1H2AA

221613

Q96QV6

0.63

STXBP4

252983

Q6ZWJ1

0.63

HIST1H2BA

255626

Q96A08

0.63

SYPL2

284612

Q5VXT5

0.63

LRRIQ4

344657

A6NIV6

0.63

ACTBL2

345651

Q562R1

0.63

TUBB2B

347733

Q9BVA1

0.63

SBSN

374897

Q6UWP8

0.63

CCDC42B

387885

A6NFT4

0.63

HSP90AB2P

391634

Q58FF8

0.63

ANKHD1

404734

Q8IWZ3

0.63

POTEKP

440915

Q9BYX7

0.63

TRIM72

493829

Q6ZMU5

0.63

HIST1H2AB; HIST1H2AE

3012

P04908

0.63

TUBA3C; TUBA3D

113457

Q13748

0.63

BRCA1

672

P38398

0.65

PML

5371

P29590

0.65

CFLAR

8837

O15519

0.65

HSPA4

3308

P34932

0.68

PPARG

5468

P37231

0.68

PSMD10

5716

O75832

0.68

HDAC5

10014

Q9UQL6

0.68

NONO

4841

Q15233

0.70

SFPQ

6421

P23246

0.70

PDCD11

22984

Q14690

0.70

SIN3A

25942

Q96ST3

0.72

TBK1

29110

Q9UHD2

0.72

TNIP3

79931

Q96KP6

0.72

HMGB1

3146

P09429

0.75

IRF8

3394

Q02556

0.75

IRF2

3660

P14316

0.75

IRF9

10379

Q00978

0.75

PELP1

27043

Q8IZL8

0.75

KPNA4

3839

O00629

0.78

FBXW11

23291

Q9UKB1

0.78

LYL1

4066

P12980

0.79

EP300

2033

Q09472

0.81

SLC25A5

292

P05141

0.82

SLC25A6

293

P12236

0.82

HSPA1A

3303

P0DMV8

0.82

HSPA1B

3304

P0DMV9

0.82

HSPA5

3309

P11021

0.82

HSPA6

3310

P17066

0.82

HSPA8

3312

P11142

0.82

HSPA9

3313

P38646

0.82

HNRNPM

4670

P52272

0.82

PRKDC

5591

P78527

0.82

VIM

7431

P08670

0.82

RUVBL1

8607

Q9Y265

0.82

TUBB4A

10382

P04350

0.82

TUBB

203068

P07437

0.82

HSPA1L

3305

P34931

0.84

HSP90AB1

3326

P08238

0.84

HIF1AN

55662

Q9NWT6

0.86

BTRC

8945

Q9Y297

0.88

RUVBL2

10856

Q9Y230

0.88

CHUK

1147

O15111

0.89

NR3C1

2908

P04150

0.89

IKBKG

8517

Q9Y6K9

0.89

COPB2

9276

P35606

0.89

TNIP1

10318

Q15025

0.89

MEN1

4221

O00255

0.90

REL

5966

Q04864

0.90

STAT3

6774

P40763

0.90

NFKBIB

4793

Q15653

0.94

NFKBIE

4794

O00221

0.95

BCL3

602

P20749

0.97

NFKB2

4791

Q00653

0.97

NFKBIA

4792

P25963

0.97

RELA

5970

Q04206

0.97

RELB

5971

Q01201

0.97

NFKB1

4790

P19838

0.99

BIRC2

329

Q13490

0.00

CASP3

836

P42574

0.00

CASP8

841

Q14790

0.00

CD14

929

P08571

0.00

CD40

958

P25942

0.00

MAPK14

1432

Q16539

0.00

CSF2

1437

P04141

0.00

CSNK1A1

1452

P48729

0.00

FCER2

2208

P06734

0.00

GLI2

2736

P10070

0.00

IL1R1

3554

P14778

0.00

IL6

3569

P05231

0.00

CXCL8

3576

P10145

0.00

IL12A

3592

P29459

0.00

IL12B

3593

P29460

0.00

JAK2

3717

O60674

0.00

LTBR

4055

P36941

0.00

MAP3K1

4214

Q13233

0.00

MYC

4609

P01106

0.00

MAP2K1

5604

Q02750

0.00

CCL3

6348

P10147

0.00

CCL5

6352

P13501

0.00

CCL11

6356

P51671

0.00

MAP3K7

6885

O43318

0.00

IL1R2

7850

P27930

0.00

CUL1

8454

Q13616

0.00

FADD

8772

Q13158

0.00

ARHGEF7

8874

Q14155

0.00

BCL10

8915

O95999

0.00

IKBKE

9641

Q14164

0.00

AKT3

10000

Q9Y243

0.00

MALT1

10892

Q9UDY8

0.00

IRAK4

51135

Q9NWZ3

0.00

CARD11

84433

Q9BXL7

0.00

DST

667

Q03001

0.49

GRB14

2888

Q14449

0.49

HMGB2

3148

P26583

0.49

IFNGR1

3459

P15260

0.49

CARM1

10498

Q86X55

0.49

TNRC6B

23112

Q9UPQ9

0.49

INTS3

65123

Q68E01

0.49

C1orf52

148423

Q8N6N3

0.49

JAKMIP1

152789

Q96N16

0.49

ATF3

467

P18847

0.52

FOS

2353

P01100

0.52

UBE2K

3093

P61086

0.52

NFRKB

4798

Q6P4R8

0.52

PRKACA

5566

P17612

0.52

SPI1

6688

P17947

0.52

RIPK1

8737

Q13546

0.52

CDK9

1025

P50750

0.55

TNFSF11

8600

O14788

0.55

G3BP2

9908

Q9UN86

0.55

NCF1

653361

P14598

0.55

HMGA1

3159

P17096

0.56

SRF

6722

P11831

0.56

COMMD7

149951

Q86VX2

0.56

SERPINA3

12

P01011

0.63

ANXA4

307

P09525

0.63

GLUL

2752

P15104

0.63

NR4A1

3164

P22736

0.63

NOV

4856

P48745

0.63

PSMA4

5685

P25789

0.63

SUMO1

7341

P63165

0.63

XPO1

7514

O14980

0.63

XRCC4

7518

Q13426

0.63

YY1

7528

P25490

0.63

CUL5

8065

Q93034

0.63

DPF1

8193

Q92782

0.63

NCOA3

8202

Q9Y6Q9

0.63

CUL4B

8450

Q13620

0.63

CUL4A

8451

Q13619

0.63

CUL3

8452

Q13618

0.63

TP63

8626

Q9H3D4

0.63

SOCS3

9021

O14543

0.63

RPS6KA5

9252

O75582

0.63

HDAC4

9759

P56524

0.63

PPARGC1A

10891

Q9UBK2

0.63

COPS6

10980

Q7L5N1

0.63

GABARAPL2

11345

P60520

0.63

SIRT1

23411

Q96EB6

0.63

BRMS1

25855

Q9HCU9

0.63

PPME1

51400

Q9Y570

0.63

DCUN1D1

54165

Q96GG9

0.63

BANP

54971

Q8N9N5

0.63

PHF10

55274

Q8WUB8

0.63

MAP1LC3B

81631

Q9GZQ8

0.63

MAP1LC3A

84557

Q9H492

0.63

SPPL2A

84888

Q8TCT8

0.63

AR

367

P10275

0.65

ETS1

2113

P14921

0.65

NCOR2

9612

Q9Y618

0.65

RNF123

63891

Q5XPI4

0.65

KAT5

10524

Q92993

0.67

SF1

7536

Q15637

0.68

DPF3

8110

Q92784

0.68

COMMD3

23412

Q9UBI1

0.68

COMMD5

28991

Q9GZQ3

0.68

COMMD9

29099

Q9P000

0.68

COMMD2

51122

Q86X83

0.68

ECSIT

51295

Q9BQ95

0.68

COMMD10

51397

Q9Y6G5

0.68

COMMD4

54939

Q9H0A8

0.68

COMMD8

54951

Q9NX08

0.68

COMMD1

150684

Q8N668

0.68

COMMD6

170622

Q7Z4G1

0.68

GSK3B

2932

P49841

0.69

TRIP4

9325

Q15650

0.70

SMAD4

4089

Q13485

0.72

VPS26A

9559

O75436

0.72

NCOR1

9611

O75376

0.72

HTT

3064

P42858

0.73

TP53BP1

7158

Q12888

0.73

MXD3

83463

Q9BW11

0.73

UNC5CL

222643

Q8IV45

0.73

PPP4C

5531

P60510

0.74

RSF1

51773

Q96T23

0.74

RXRA

6256

P19793

0.75

HDAC3

8841

O15379

0.75

NCOA6

23054

Q14686

0.75

PLD3

23646

Q8IV08

0.75

NKRF

55922

O15226

0.75

MTPN

136319

P58546

0.75

CEBPB

1051

P17676

0.76

ABCC2

1244

Q92887

0.76

DPF2

5977

Q92785

0.78

HMGA2

8091

P52926

0.78

TAB2

23118

Q9NYJ8

0.78

TSC22D3

1831

Q99576

0.79

E2F1

1869

Q01094

0.79

STAT6

6778

P42226

0.79

ITGB3BP

23421

Q13352

0.79

ESR1

2099

P03372

0.80

AURKA

6790

O14965

0.82

COPS5

10987

Q92905

0.82

KLF5

688

Q13887

0.85

ELF1

1997

P32519

0.85

NCOA1

8648

Q15788

0.85

PARP1

142

P09874

0.87

CTNNB1

1499

P35222

0.87

RPS3

6188

P23396

0.87

ELF3

1999

P78545

0.88

SP1

6667

P08047

0.88

TXN

7295

P10599

0.88

SPAG9

9043

O60271

0.88

IKBKB

3551

O14920

0.89

MAP3K8

1326

P41279

0.90

NOTCH1

4851

P46531

0.90

TNIP2

79155

Q8NFZ5

0.90

NFKBIZ

64332

Q9BYH8

0.94

HDAC1

3065

Q13547

0.97