Gene Symbol | ARCN1 |
Entrez ID | 372 |
Uniprot ID | P48444 |
Description | archain 1 |
Chromosomal Location | chr11: 118,572,390-118,603,033 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0006886 |
intracellular protein transport |
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. |
TAS |
BP |
GO:0006888 |
ER to Golgi vesicle-mediated transport |
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi. |
TAS |
BP |
GO:0006890 |
retrograde vesicle-mediated transport, Golgi to ER |
The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG. |
TAS |
BP |
GO:0008344 |
adult locomotory behavior |
Locomotory behavior in a fully developed and mature organism. |
IEA |
BP |
GO:0021691 |
cerebellar Purkinje cell layer maturation |
A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar Purkinje cell layer to attain its fully functional state. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells. |
IEA |
BP |
GO:0043473 |
pigmentation |
The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells. |
IEA |
CC |
GO:0000139 |
Golgi membrane |
The lipid bilayer surrounding any of the compartments of the Golgi apparatus. |
TAS |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
CC |
GO:0005789 |
endoplasmic reticulum membrane |
The lipid bilayer surrounding the endoplasmic reticulum. |
TAS |
CC |
GO:0005794 |
Golgi apparatus |
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions. |
IDA |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
TAS |
CC |
GO:0016020 |
membrane |
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
IDA |
CC |
GO:0030126 |
COPI vesicle coat |
One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state. |
ISS |
CC |
GO:0030133 |
transport vesicle |
Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell. |
TAS |
CC |
GO:0043231 |
intracellular membrane-bounded organelle |
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
IDA |
MF |
GO:0044822 |
poly(A) RNA binding |
Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases. |
IDA |
Domain ID | Description |
---|---|
IPR011012 |
Longin-like domain |
IPR022775 |
AP complex, mu/sigma subunit |
IPR027059 |
Coatomer delta subunit |
IPR028565 |
Mu homology domain |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
WP3596 |
miR-517 relationship with ARCN1 and USP1 |
WikiPathways |
UMLS CUI | UMLS Term |
---|---|
C0004134 |
Ataxia |
Tissue | Cell Type |
---|---|
appendix |
glandular cells |
bone marrow |
hematopoietic cells |
breast |
glandular cells |
bronchus |
respiratory epithelial cells |
cerebellum |
Purkinje cells |
cerebral cortex |
glial cells |
colon |
glandular cells |
colon |
peripheral nerve/ganglion |
duodenum |
glandular cells |
epididymis |
glandular cells |
esophagus |
squamous epithelial cells |
fallopian tube |
glandular cells |
gallbladder |
glandular cells |
lung |
macrophages |
lymph node |
germinal center cells |
lymph node |
non-germinal center cells |
nasopharynx |
respiratory epithelial cells |
pancreas |
exocrine glandular cells |
placenta |
decidual cells |
placenta |
trophoblastic cells |
rectum |
glandular cells |
salivary gland |
glandular cells |
seminal vesicle |
glandular cells |
skin |
fibroblasts |
skin |
Langerhans |
small intestine |
glandular cells |
soft tissue |
chondrocytes |
stomach |
glandular cells |
testis |
cells in seminiferous ducts |
thyroid gland |
glandular cells |
tonsil |
germinal center cells |
tonsil |
non-germinal center cells |
urinary bladder |
urothelial cells |
vagina |
squamous epithelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
SF3B1 |
23451 |
O75533 |
0.49 |
NOB1 |
28987 |
Q9ULX3 |
0.49 |
APP |
351 |
P05067 |
0.56 |
COPE |
11316 |
O14579 |
0.59 |
ARCN1 |
372 |
P48444 |
0.63 |
FLNB |
2317 |
O75369 |
0.63 |
KLC1 |
3831 |
Q07866 |
0.63 |
PPP4R3A |
55671 |
Q6IN85 |
0.63 |
COPZ1 |
22818 |
P61923 |
0.83 |
TMEM216 |
51259 |
Q9P0N5 |
0.49 |
TMEM17 |
200728 |
Q86X19 |
0.49 |
COPZ2 |
51226 |
Q9P299 |
0.59 |
CDC5L |
988 |
Q99459 |
0.63 |
DDB2 |
1643 |
Q92466 |
0.63 |
DIAPH1 |
1729 |
O60610 |
0.63 |
ESR2 |
2100 |
Q92731 |
0.63 |
ITGA4 |
3676 |
P13612 |
0.63 |
JUN |
3725 |
P05412 |
0.63 |
MCM2 |
4171 |
P49736 |
0.63 |
MYC |
4609 |
P01106 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
RNF2 |
6045 |
Q99496 |
0.63 |
TLE3 |
7090 |
Q04726 |
0.63 |
VCAM1 |
7412 |
P19320 |
0.63 |
XPO1 |
7514 |
O14980 |
0.63 |
TSC22D1 |
8848 |
Q15714 |
0.63 |
PTBP3 |
9991 |
O95758 |
0.63 |
SACM1L |
22908 |
Q9NTJ5 |
0.63 |
SNW1 |
22938 |
Q13573 |
0.63 |
PHLDA3 |
23612 |
Q9Y5J5 |
0.63 |
TMED9 |
54732 |
Q9BVK6 |
0.63 |
OTUB1 |
55611 |
Q96FW1 |
0.63 |
CCDC8 |
83987 |
Q9H0W5 |
0.63 |
ATL3 |
25923 |
Q6DD88 |
0.72 |
NUDCD1 |
84955 |
Q96RS6 |
0.72 |
ARMC6 |
93436 |
Q6NXE6 |
0.72 |
CNTROB |
116840 |
Q8N137 |
0.72 |
KEAP1 |
9817 |
Q14145 |
0.76 |
PAN2 |
9924 |
Q504Q3 |
0.76 |
TMED10 |
10972 |
P49755 |
0.78 |
COPG1 |
22820 |
Q9Y678 |
0.79 |
COPG2 |
26958 |
Q9UBF2 |
0.82 |
COPB2 |
9276 |
P35606 |
0.85 |
COPA |
1314 |
P53621 |
0.87 |
COPB1 |
1315 |
P53618 |
0.99 |