Protein Description

Gene Symbol EIF6
Entrez ID 3692
Uniprot ID P56537
Description eukaryotic translation initiation factor 6
Chromosomal Location chr20: 35,278,907-35,284,985
Ontology GO ID GO Term Definition Evidence

BP

GO:0000054

ribosomal subunit export from nucleus

The directed movement of a ribosomal subunit from the nucleus into the cytoplasm.

IBA

BP

GO:0000460

maturation of 5.8S rRNA

Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule.

IBA

BP

GO:0000470

maturation of LSU-rRNA

Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule.

IBA

BP

GO:0006110

regulation of glycolytic process

Any process that modulates the frequency, rate or extent of glycolysis.

ISS

BP

GO:0006413

translational initiation

The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.

IEA

BP

GO:0032868

response to insulin

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.

ISS

BP

GO:0035195

gene silencing by miRNA

Downregulation of gene expression through the action of microRNAs (miRNAs), endogenous 21-24 nucleotide small RNAs processed from stem-loop RNA precursors (pre-miRNAs). Once incorporated into a RNA-induced silencing complex (RISC), miRNAs can downregulate gene expression by either of two posttranscriptional mechanisms: endolytic cleavage of mRNA cleavage or translational repression, usually accompanied by poly-A tail shortening and subsequent degradation of the mRNA.

IMP

BP

GO:0035278

miRNA mediated inhibition of translation

The process in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs

IMP

BP

GO:0042256

mature ribosome assembly

The aggregation, arrangement and bonding together of the large and small ribosomal subunits into a functional ribosome.

IMP

BP

GO:0042304

regulation of fatty acid biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils.

ISS

BP

GO:0045652

regulation of megakaryocyte differentiation

Any process that modulates the frequency, rate or extent of megakaryocyte differentiation.

ISS

BP

GO:0045727

positive regulation of translation

Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA.

ISS

BP

GO:1902626

assembly of large subunit precursor of preribosome

The aggregation, arrangement and bonding together of a set of components to form the large subunit precursor of the preribosome.

IBA

BP

GO:2000377

regulation of reactive oxygen species metabolic process

Any process that modulates the frequency, rate or extent of reactive oxygen species metabolic process.

ISS

CC

GO:0005634

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

IDA

CC

GO:0005654

nucleoplasm

That part of the nuclear content other than the chromosomes or the nucleolus.

IDA

CC

GO:0005730

nucleolus

A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.

IBA

CC

GO:0005737

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

IDA

CC

GO:0005829

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

IBA

CC

GO:0030687

preribosome, large subunit precursor

A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.

IBA

CC

GO:0070062

extracellular exosome

A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

IDA

MF

GO:0003743

translation initiation factor activity

Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.

IEA

MF

GO:0005515

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

IPI

MF

GO:0043022

ribosome binding

Interacting selectively and non-covalently with any part of a ribosome.

IDA

MF

GO:0043023

ribosomal large subunit binding

Interacting selectively and non-covalently with any part of the larger ribosomal subunit.

IBA

Domain ID Description

IPR002769

Translation initiation factor IF6

Pathway ID Pathway Term Pathway Source

hsa03008

Ribosome biogenesis in eukaryotes

KEGG

WP107

Translation Factors

WikiPathways

h_eifPathway

Eukaryotic protein translation

BioCarta

UMLS CUI UMLS Term

C0016689

Freckles

C0019693

HIV Infections

C1458155

Mammary Neoplasms

Tissue Cell Type

adrenal gland

glandular cells

appendix

glandular cells

colon

glandular cells

duodenum

glandular cells

esophagus

squamous epithelial cells

fallopian tube

glandular cells

gallbladder

glandular cells

kidney

cells in tubules

pancreas

exocrine glandular cells

placenta

trophoblastic cells

rectum

glandular cells

skin

epidermal cells

small intestine

glandular cells

stomach

glandular cells

testis

cells in seminiferous ducts

tonsil

germinal center cells

tonsil

squamous epithelial cells

vagina

squamous epithelial cells

No databases found.

Pubmed ID Author Year Title

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

Gene Symbol Entrez ID Uniprot ID Score

IMPA1

3612

P29218

0.49

LMNB1

4001

P20700

0.49

SNU13

4809

P55769

0.49

PSMA4

5685

P25789

0.49

RPL17

6139

P18621

0.49

RPS5

6193

P46782

0.49

RPS6

6194

P62753

0.49

RPS24

6229

P62847

0.49

RPL23

9349

P62829

0.49

RBM14

10432

Q96PK6

0.49

CHMP4A

29082

Q9BY43

0.49

CHMP4B

128866

Q9H444

0.49

EIF3J

8669

O75822

0.55

APP

351

P05067

0.56

NOP2

4839

P46087

0.56

RPL7

6129

P18124

0.56

PUM3

9933

Q15397

0.56

NOP58

51602

Q9Y2X3

0.56

DDX27

55661

Q96GQ7

0.56

RPL37A

6168

P61513

0.59

RPS4X

6191

P62701

0.59

RPS15A

6210

P62244

0.59

RPL9; RPL9P7; RPL9P8; RPL9P9

6133

P32969

0.59

EIF3B

8662

P55884

0.62

EIF3C

8663

Q99613

0.62

ACP1

52

P24666

0.63

ANXA2

302

P07355

0.63

APEX1

328

P27695

0.63

ASNA1

439

O43681

0.63

ATP5O

539

P48047

0.63

CAPN1

823

P07384

0.63

CBR1

873

P16152

0.63

CS

1431

O75390

0.63

DDOST

1650

P39656

0.63

EEF1D

1936

P29692

0.63

EIF1AX

1964

P47813

0.63

FH

2271

P07954

0.63

GDI2

2665

P50395

0.63

HPRT1

3251

P00492

0.63

EIF3E

3646

P60228

0.63

MAD2L1

4085

Q13257

0.63

MAGOH

4116

P61326

0.63

MYL6

4637

P60660

0.63

PA2G4

5036

Q9UQ80

0.63

PAFAH1B2

5049

P68402

0.63

PDHA1

5160

P08559

0.63

PEPD

5184

P12955

0.63

PFDN2

5202

Q9UHV9

0.63

PPP2CB

5516

P62714

0.63

PPP2R1A

5518

P30153

0.63

PSMB1

5689

P20618

0.63

PSMB3

5691

P49720

0.63

RPS16

6217

P62249

0.63

RRM1

6240

P23921

0.63

SEC13

6396

P55735

0.63

SHMT2

6472

P34897

0.63

FSCN1

6624

Q16658

0.63

TALDO1

6888

P37837

0.63

TOP2A

7153

P11388

0.63

TOP2B

7155

Q02880

0.63

TPM3

7170

P06753

0.63

UBE2I

7329

P63279

0.63

UCHL1

7345

P09936

0.63

VDAC1

7416

P21796

0.63

WFS1

7466

O76024

0.63

CNBP

7555

P62633

0.63

OFD1

8481

O75665

0.63

RUVBL1

8607

Q9Y265

0.63

EIF3I

8668

Q13347

0.63

MRPS31

10240

Q92665

0.63

AHSA1

10598

O95433

0.63

NUDC

10726

Q9Y266

0.63

POP1

10940

Q99575

0.63

OS9

10956

Q13438

0.63

NUDT5

11164

Q9UKK9

0.63

HSPA4L

22824

O95757

0.63

USP33

23032

Q8TEY7

0.63

GANAB

23193

Q14697

0.63

POLA2

23649

Q14181

0.63

ABHD14A

25864

Q9BUJ0

0.63

CACYBP

27101

Q9HB71

0.63

EIF3K

27335

Q9UBQ5

0.63

GIT1

28964

Q9Y2X7

0.63

BZW2

28969

Q9Y6E2

0.63

GLTSCR2

29997

Q9NZM5

0.63

CMPK1

51727

P30085

0.63

C4orf27

54969

Q9NWY4

0.63

ENOX1

55068

Q8TC92

0.63

LRRC59

55379

Q96AG4

0.63

LRIF1

55791

Q5T3J3

0.63

RCC2

55920

Q9P258

0.63

SEPT3

55964

Q9UH03

0.63

MYDGF

56005

Q969H8

0.63

CEP126

57562

Q9P2H0

0.63

SRPRB

58477

Q9Y5M8

0.63

GINS3

64785

Q9BRX5

0.63

UPF3B

65109

Q9BZI7

0.63

FUNDC2

65991

Q9BWH2

0.63

CRELD1

78987

Q96HD1

0.63

GRPEL1

80273

Q9HAV7

0.63

AKT1S1

84335

Q96B36

0.63

ZNF622

90441

Q969S3

0.63

ACAP3

116983

Q96P50

0.63

ASPM

259266

Q8IZT6

0.63

RPL4

6124

P36578

0.65

RPL5

6125

P46777

0.65

RPL18A

6142

Q02543

0.65

RPL31

6160

P62899

0.65

BTF3

689

P20290

0.70

CFL1

1072

P23528

0.70

IMPDH2

3615

P12268

0.70

TUFM

7284

P49411

0.70

NMD3

51068

Q96D46

0.70

PPAN

56342

Q9NQ55

0.70

RPL21P97

387753

N/A

0.72

RPL6

6128

Q02878

0.73

FUS

2521

P35637

0.76

HAS1

3036

Q92839

0.76

OAT

4942

P04181

0.76

RGS10

6001

O43665

0.76

YARS

8565

P54577

0.76

SORBS1

10580

Q9BX66

0.76

PAICS

10606

P22234

0.76

RRP15

51018

Q9Y3B9

0.76

PRKCB

5579

P05771

0.77

NREP

9315

Q16612

0.77

RPL34

6164

P49207

0.86

NPEPPS

9520

P55786

0.86

BCCIP

56647

Q9P287

0.87

ITGB4

3691

P16144

0.88

RACK1

10399

P63244

0.89

RPL3

6122

P39023

0.93

GTPBP4

23560

Q9BZE4

0.93

CLTC

1213

Q00610

0.49

DHX9

1660

Q08211

0.49

HNRNPU

3192

Q00839

0.49

PFDN4

5203

Q9NQP4

0.49

PPIB

5479

P23284

0.49

RAN

5901

P62826

0.49

TSNAX

7257

Q99598

0.49

PABPN1

8106

Q86U42

0.49

API5

8539

Q9BZZ5

0.49

DDX39A

10212

O00148

0.49

RUVBL2

10856

Q9Y230

0.49

NLRP1

22861

Q9C000

0.49

RPL36

25873

Q9Y3U8

0.49

GNL3

26354

Q9BVP2

0.49

PDCD4

27250

Q53EL6

0.49

ELAC2

60528

Q9BQ52

0.49

MCFD2

90411

Q8NI22

0.49

DDX3X

1654

O00571

0.55

RPL8

6132

P62917

0.56

RPLP0

6175

P05388

0.56

VAPA

9218

Q9P0L0

0.56

RPL13A

23521

P40429

0.56

ABCF1

23

Q8NE71

0.63

ACTG1

71

P63261

0.63

ALDH2

217

P05091

0.63

DFFA

1676

O00273

0.63

ECT2

1894

Q9H8V3

0.63

ESR1

2099

P03372

0.63

GH1

2688

P01241

0.63

HIP1

3092

O00291

0.63

HSPA1A

3303

P0DMV8

0.63

HSPA1B

3304

P0DMV9

0.63

HSPA9

3313

P38646

0.63

IFI16

3428

Q16666

0.63

JUN

3725

P05412

0.63

MCC

4163

P23508

0.63

NTRK1

4914

P04629

0.63

PLK1

5347

P53350

0.63

PPP5C

5536

P53041

0.63

PRKAB1

5564

Q9Y478

0.63

PSME1

5720

Q06323

0.63

RARS

5917

P54136

0.63

RNF2

6045

Q99496

0.63

TK1

7083

P04183

0.63

CUL3

8452

Q13618

0.63

KIAA0101

9768

Q15004

0.63

CUL7

9820

Q14999

0.63

MCRS1

10445

Q96EZ8

0.63

GABARAP

11337

O95166

0.63

OBSL1

23363

O75147

0.63

TNFAIP8

25816

O95379

0.63

SIRT7

51547

Q9NRC8

0.63

OTUB1

55611

Q96FW1

0.63

LYAR

55646

Q9NX58

0.63

CAND1

55832

Q86VP6

0.63

ZBTB26

57684

Q9HCK0

0.63

CLEC4G

339390

Q6UXB4

0.63

CKMT1A; CKMT1B

1159

P12532

0.63

FBL

2091

P22087

0.65

EBNA1BP2

10969

Q99848

0.65

CSNK2B

1460

P67870

0.70

EIF4E

1977

P06730

0.70

CUL1

8454

Q13616

0.70

HNRNPD

3184

Q14103

0.72

CNOT2

4848

Q9NZN8

0.72

VCAM1

7412

P19320

0.72

HDAC9

9734

Q9UKV0

0.72

PHF8

23133

Q9UPP1

0.72

XRN2

22803

Q9H0D6

0.73

OAS3

4940

Q9Y6K5

0.75

EIF2AK2

5610

P19525

0.75

DHX58

79132

Q96C10

0.75

ARF6

382

P62330

0.76

FHL2

2274

Q14192

0.76

FIBP

9158

O43427

0.76