Gene Symbol | EIF6 |
Entrez ID | 3692 |
Uniprot ID | P56537 |
Description | eukaryotic translation initiation factor 6 |
Chromosomal Location | chr20: 35,278,907-35,284,985 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0000054 |
ribosomal subunit export from nucleus |
The directed movement of a ribosomal subunit from the nucleus into the cytoplasm. |
IBA |
BP |
GO:0000460 |
maturation of 5.8S rRNA |
Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule. |
IBA |
BP |
GO:0000470 |
maturation of LSU-rRNA |
Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule. |
IBA |
BP |
GO:0006110 |
regulation of glycolytic process |
Any process that modulates the frequency, rate or extent of glycolysis. |
ISS |
BP |
GO:0006413 |
translational initiation |
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA. |
IEA |
BP |
GO:0032868 |
response to insulin |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms. |
ISS |
BP |
GO:0035195 |
gene silencing by miRNA |
Downregulation of gene expression through the action of microRNAs (miRNAs), endogenous 21-24 nucleotide small RNAs processed from stem-loop RNA precursors (pre-miRNAs). Once incorporated into a RNA-induced silencing complex (RISC), miRNAs can downregulate gene expression by either of two posttranscriptional mechanisms: endolytic cleavage of mRNA cleavage or translational repression, usually accompanied by poly-A tail shortening and subsequent degradation of the mRNA. |
IMP |
BP |
GO:0035278 |
miRNA mediated inhibition of translation |
The process in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs |
IMP |
BP |
GO:0042256 |
mature ribosome assembly |
The aggregation, arrangement and bonding together of the large and small ribosomal subunits into a functional ribosome. |
IMP |
BP |
GO:0042304 |
regulation of fatty acid biosynthetic process |
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. |
ISS |
BP |
GO:0045652 |
regulation of megakaryocyte differentiation |
Any process that modulates the frequency, rate or extent of megakaryocyte differentiation. |
ISS |
BP |
GO:0045727 |
positive regulation of translation |
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA. |
ISS |
BP |
GO:1902626 |
assembly of large subunit precursor of preribosome |
The aggregation, arrangement and bonding together of a set of components to form the large subunit precursor of the preribosome. |
IBA |
BP |
GO:2000377 |
regulation of reactive oxygen species metabolic process |
Any process that modulates the frequency, rate or extent of reactive oxygen species metabolic process. |
ISS |
CC |
GO:0005634 |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
IDA |
CC |
GO:0005654 |
nucleoplasm |
That part of the nuclear content other than the chromosomes or the nucleolus. |
IDA |
CC |
GO:0005730 |
nucleolus |
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
IBA |
CC |
GO:0005737 |
cytoplasm |
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
IDA |
CC |
GO:0005829 |
cytosol |
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
IBA |
CC |
GO:0030687 |
preribosome, large subunit precursor |
A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit. |
IBA |
CC |
GO:0070062 |
extracellular exosome |
A membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
IDA |
MF |
GO:0003743 |
translation initiation factor activity |
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. |
IEA |
MF |
GO:0005515 |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
IPI |
MF |
GO:0043022 |
ribosome binding |
Interacting selectively and non-covalently with any part of a ribosome. |
IDA |
MF |
GO:0043023 |
ribosomal large subunit binding |
Interacting selectively and non-covalently with any part of the larger ribosomal subunit. |
IBA |
Domain ID | Description |
---|---|
IPR002769 |
Translation initiation factor IF6 |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa03008 |
Ribosome biogenesis in eukaryotes |
KEGG |
WP107 |
Translation Factors |
WikiPathways |
h_eifPathway |
Eukaryotic protein translation |
BioCarta |
UMLS CUI | UMLS Term |
---|---|
C0016689 |
Freckles |
C0019693 |
HIV Infections |
C1458155 |
Mammary Neoplasms |
Tissue | Cell Type |
---|---|
adrenal gland |
glandular cells |
appendix |
glandular cells |
colon |
glandular cells |
duodenum |
glandular cells |
esophagus |
squamous epithelial cells |
fallopian tube |
glandular cells |
gallbladder |
glandular cells |
kidney |
cells in tubules |
pancreas |
exocrine glandular cells |
placenta |
trophoblastic cells |
rectum |
glandular cells |
skin |
epidermal cells |
small intestine |
glandular cells |
stomach |
glandular cells |
testis |
cells in seminiferous ducts |
tonsil |
germinal center cells |
tonsil |
squamous epithelial cells |
vagina |
squamous epithelial cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
IMPA1 |
3612 |
P29218 |
0.49 |
LMNB1 |
4001 |
P20700 |
0.49 |
SNU13 |
4809 |
P55769 |
0.49 |
PSMA4 |
5685 |
P25789 |
0.49 |
RPL17 |
6139 |
P18621 |
0.49 |
RPS5 |
6193 |
P46782 |
0.49 |
RPS6 |
6194 |
P62753 |
0.49 |
RPS24 |
6229 |
P62847 |
0.49 |
RPL23 |
9349 |
P62829 |
0.49 |
RBM14 |
10432 |
Q96PK6 |
0.49 |
CHMP4A |
29082 |
Q9BY43 |
0.49 |
CHMP4B |
128866 |
Q9H444 |
0.49 |
EIF3J |
8669 |
O75822 |
0.55 |
APP |
351 |
P05067 |
0.56 |
NOP2 |
4839 |
P46087 |
0.56 |
RPL7 |
6129 |
P18124 |
0.56 |
PUM3 |
9933 |
Q15397 |
0.56 |
NOP58 |
51602 |
Q9Y2X3 |
0.56 |
DDX27 |
55661 |
Q96GQ7 |
0.56 |
RPL37A |
6168 |
P61513 |
0.59 |
RPS4X |
6191 |
P62701 |
0.59 |
RPS15A |
6210 |
P62244 |
0.59 |
RPL9; RPL9P7; RPL9P8; RPL9P9 |
6133 |
P32969 |
0.59 |
EIF3B |
8662 |
P55884 |
0.62 |
EIF3C |
8663 |
Q99613 |
0.62 |
ACP1 |
52 |
P24666 |
0.63 |
ANXA2 |
302 |
P07355 |
0.63 |
APEX1 |
328 |
P27695 |
0.63 |
ASNA1 |
439 |
O43681 |
0.63 |
ATP5O |
539 |
P48047 |
0.63 |
CAPN1 |
823 |
P07384 |
0.63 |
CBR1 |
873 |
P16152 |
0.63 |
CS |
1431 |
O75390 |
0.63 |
DDOST |
1650 |
P39656 |
0.63 |
EEF1D |
1936 |
P29692 |
0.63 |
EIF1AX |
1964 |
P47813 |
0.63 |
FH |
2271 |
P07954 |
0.63 |
GDI2 |
2665 |
P50395 |
0.63 |
HPRT1 |
3251 |
P00492 |
0.63 |
EIF3E |
3646 |
P60228 |
0.63 |
MAD2L1 |
4085 |
Q13257 |
0.63 |
MAGOH |
4116 |
P61326 |
0.63 |
MYL6 |
4637 |
P60660 |
0.63 |
PA2G4 |
5036 |
Q9UQ80 |
0.63 |
PAFAH1B2 |
5049 |
P68402 |
0.63 |
PDHA1 |
5160 |
P08559 |
0.63 |
PEPD |
5184 |
P12955 |
0.63 |
PFDN2 |
5202 |
Q9UHV9 |
0.63 |
PPP2CB |
5516 |
P62714 |
0.63 |
PPP2R1A |
5518 |
P30153 |
0.63 |
PSMB1 |
5689 |
P20618 |
0.63 |
PSMB3 |
5691 |
P49720 |
0.63 |
RPS16 |
6217 |
P62249 |
0.63 |
RRM1 |
6240 |
P23921 |
0.63 |
SEC13 |
6396 |
P55735 |
0.63 |
SHMT2 |
6472 |
P34897 |
0.63 |
FSCN1 |
6624 |
Q16658 |
0.63 |
TALDO1 |
6888 |
P37837 |
0.63 |
TOP2A |
7153 |
P11388 |
0.63 |
TOP2B |
7155 |
Q02880 |
0.63 |
TPM3 |
7170 |
P06753 |
0.63 |
UBE2I |
7329 |
P63279 |
0.63 |
UCHL1 |
7345 |
P09936 |
0.63 |
VDAC1 |
7416 |
P21796 |
0.63 |
WFS1 |
7466 |
O76024 |
0.63 |
CNBP |
7555 |
P62633 |
0.63 |
OFD1 |
8481 |
O75665 |
0.63 |
RUVBL1 |
8607 |
Q9Y265 |
0.63 |
EIF3I |
8668 |
Q13347 |
0.63 |
MRPS31 |
10240 |
Q92665 |
0.63 |
AHSA1 |
10598 |
O95433 |
0.63 |
NUDC |
10726 |
Q9Y266 |
0.63 |
POP1 |
10940 |
Q99575 |
0.63 |
OS9 |
10956 |
Q13438 |
0.63 |
NUDT5 |
11164 |
Q9UKK9 |
0.63 |
HSPA4L |
22824 |
O95757 |
0.63 |
USP33 |
23032 |
Q8TEY7 |
0.63 |
GANAB |
23193 |
Q14697 |
0.63 |
POLA2 |
23649 |
Q14181 |
0.63 |
ABHD14A |
25864 |
Q9BUJ0 |
0.63 |
CACYBP |
27101 |
Q9HB71 |
0.63 |
EIF3K |
27335 |
Q9UBQ5 |
0.63 |
GIT1 |
28964 |
Q9Y2X7 |
0.63 |
BZW2 |
28969 |
Q9Y6E2 |
0.63 |
GLTSCR2 |
29997 |
Q9NZM5 |
0.63 |
CMPK1 |
51727 |
P30085 |
0.63 |
C4orf27 |
54969 |
Q9NWY4 |
0.63 |
ENOX1 |
55068 |
Q8TC92 |
0.63 |
LRRC59 |
55379 |
Q96AG4 |
0.63 |
LRIF1 |
55791 |
Q5T3J3 |
0.63 |
RCC2 |
55920 |
Q9P258 |
0.63 |
SEPT3 |
55964 |
Q9UH03 |
0.63 |
MYDGF |
56005 |
Q969H8 |
0.63 |
CEP126 |
57562 |
Q9P2H0 |
0.63 |
SRPRB |
58477 |
Q9Y5M8 |
0.63 |
GINS3 |
64785 |
Q9BRX5 |
0.63 |
UPF3B |
65109 |
Q9BZI7 |
0.63 |
FUNDC2 |
65991 |
Q9BWH2 |
0.63 |
CRELD1 |
78987 |
Q96HD1 |
0.63 |
GRPEL1 |
80273 |
Q9HAV7 |
0.63 |
AKT1S1 |
84335 |
Q96B36 |
0.63 |
ZNF622 |
90441 |
Q969S3 |
0.63 |
ACAP3 |
116983 |
Q96P50 |
0.63 |
ASPM |
259266 |
Q8IZT6 |
0.63 |
RPL4 |
6124 |
P36578 |
0.65 |
RPL5 |
6125 |
P46777 |
0.65 |
RPL18A |
6142 |
Q02543 |
0.65 |
RPL31 |
6160 |
P62899 |
0.65 |
BTF3 |
689 |
P20290 |
0.70 |
CFL1 |
1072 |
P23528 |
0.70 |
IMPDH2 |
3615 |
P12268 |
0.70 |
TUFM |
7284 |
P49411 |
0.70 |
NMD3 |
51068 |
Q96D46 |
0.70 |
PPAN |
56342 |
Q9NQ55 |
0.70 |
RPL21P97 |
387753 |
N/A |
0.72 |
RPL6 |
6128 |
Q02878 |
0.73 |
FUS |
2521 |
P35637 |
0.76 |
HAS1 |
3036 |
Q92839 |
0.76 |
OAT |
4942 |
P04181 |
0.76 |
RGS10 |
6001 |
O43665 |
0.76 |
YARS |
8565 |
P54577 |
0.76 |
SORBS1 |
10580 |
Q9BX66 |
0.76 |
PAICS |
10606 |
P22234 |
0.76 |
RRP15 |
51018 |
Q9Y3B9 |
0.76 |
PRKCB |
5579 |
P05771 |
0.77 |
NREP |
9315 |
Q16612 |
0.77 |
RPL34 |
6164 |
P49207 |
0.86 |
NPEPPS |
9520 |
P55786 |
0.86 |
BCCIP |
56647 |
Q9P287 |
0.87 |
ITGB4 |
3691 |
P16144 |
0.88 |
RACK1 |
10399 |
P63244 |
0.89 |
RPL3 |
6122 |
P39023 |
0.93 |
GTPBP4 |
23560 |
Q9BZE4 |
0.93 |
CLTC |
1213 |
Q00610 |
0.49 |
DHX9 |
1660 |
Q08211 |
0.49 |
HNRNPU |
3192 |
Q00839 |
0.49 |
PFDN4 |
5203 |
Q9NQP4 |
0.49 |
PPIB |
5479 |
P23284 |
0.49 |
RAN |
5901 |
P62826 |
0.49 |
TSNAX |
7257 |
Q99598 |
0.49 |
PABPN1 |
8106 |
Q86U42 |
0.49 |
API5 |
8539 |
Q9BZZ5 |
0.49 |
DDX39A |
10212 |
O00148 |
0.49 |
RUVBL2 |
10856 |
Q9Y230 |
0.49 |
NLRP1 |
22861 |
Q9C000 |
0.49 |
RPL36 |
25873 |
Q9Y3U8 |
0.49 |
GNL3 |
26354 |
Q9BVP2 |
0.49 |
PDCD4 |
27250 |
Q53EL6 |
0.49 |
ELAC2 |
60528 |
Q9BQ52 |
0.49 |
MCFD2 |
90411 |
Q8NI22 |
0.49 |
DDX3X |
1654 |
O00571 |
0.55 |
RPL8 |
6132 |
P62917 |
0.56 |
RPLP0 |
6175 |
P05388 |
0.56 |
VAPA |
9218 |
Q9P0L0 |
0.56 |
RPL13A |
23521 |
P40429 |
0.56 |
ABCF1 |
23 |
Q8NE71 |
0.63 |
ACTG1 |
71 |
P63261 |
0.63 |
ALDH2 |
217 |
P05091 |
0.63 |
DFFA |
1676 |
O00273 |
0.63 |
ECT2 |
1894 |
Q9H8V3 |
0.63 |
ESR1 |
2099 |
P03372 |
0.63 |
GH1 |
2688 |
P01241 |
0.63 |
HIP1 |
3092 |
O00291 |
0.63 |
HSPA1A |
3303 |
P0DMV8 |
0.63 |
HSPA1B |
3304 |
P0DMV9 |
0.63 |
HSPA9 |
3313 |
P38646 |
0.63 |
IFI16 |
3428 |
Q16666 |
0.63 |
JUN |
3725 |
P05412 |
0.63 |
MCC |
4163 |
P23508 |
0.63 |
NTRK1 |
4914 |
P04629 |
0.63 |
PLK1 |
5347 |
P53350 |
0.63 |
PPP5C |
5536 |
P53041 |
0.63 |
PRKAB1 |
5564 |
Q9Y478 |
0.63 |
PSME1 |
5720 |
Q06323 |
0.63 |
RARS |
5917 |
P54136 |
0.63 |
RNF2 |
6045 |
Q99496 |
0.63 |
TK1 |
7083 |
P04183 |
0.63 |
CUL3 |
8452 |
Q13618 |
0.63 |
KIAA0101 |
9768 |
Q15004 |
0.63 |
CUL7 |
9820 |
Q14999 |
0.63 |
MCRS1 |
10445 |
Q96EZ8 |
0.63 |
GABARAP |
11337 |
O95166 |
0.63 |
OBSL1 |
23363 |
O75147 |
0.63 |
TNFAIP8 |
25816 |
O95379 |
0.63 |
SIRT7 |
51547 |
Q9NRC8 |
0.63 |
OTUB1 |
55611 |
Q96FW1 |
0.63 |
LYAR |
55646 |
Q9NX58 |
0.63 |
CAND1 |
55832 |
Q86VP6 |
0.63 |
ZBTB26 |
57684 |
Q9HCK0 |
0.63 |
CLEC4G |
339390 |
Q6UXB4 |
0.63 |
CKMT1A; CKMT1B |
1159 |
P12532 |
0.63 |
FBL |
2091 |
P22087 |
0.65 |
EBNA1BP2 |
10969 |
Q99848 |
0.65 |
CSNK2B |
1460 |
P67870 |
0.70 |
EIF4E |
1977 |
P06730 |
0.70 |
CUL1 |
8454 |
Q13616 |
0.70 |
HNRNPD |
3184 |
Q14103 |
0.72 |
CNOT2 |
4848 |
Q9NZN8 |
0.72 |
VCAM1 |
7412 |
P19320 |
0.72 |
HDAC9 |
9734 |
Q9UKV0 |
0.72 |
PHF8 |
23133 |
Q9UPP1 |
0.72 |
XRN2 |
22803 |
Q9H0D6 |
0.73 |
OAS3 |
4940 |
Q9Y6K5 |
0.75 |
EIF2AK2 |
5610 |
P19525 |
0.75 |
DHX58 |
79132 |
Q96C10 |
0.75 |
ARF6 |
382 |
P62330 |
0.76 |
FHL2 |
2274 |
Q14192 |
0.76 |
FIBP |
9158 |
O43427 |
0.76 |