Protein Description

Gene Symbol ID3
Entrez ID 3399
Uniprot ID Q02535
Description inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
Chromosomal Location chr1: 23,557,918-23,559,794
Ontology GO ID GO Term Definition Evidence

BP

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.

IEA

BP

GO:0001656

metanephros development

The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord. The metanephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine.

IEA

BP

GO:0006275

regulation of DNA replication

Any process that modulates the frequency, rate or extent of DNA replication.

IEA

BP

GO:0006351

transcription, DNA-templated

The cellular synthesis of RNA on a template of DNA.

IEA

BP

GO:0007275

multicellular organism development

The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

TAS

BP

GO:0007417

central nervous system development

The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.

IEA

BP

GO:0007507

heart development

The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.

IEA

BP

GO:0007517

muscle organ development

The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.

IEA

BP

GO:0007623

circadian rhythm

Any biological process in an organism that recurs with a regularity of approximately 24 hours.

IEA

BP

GO:0009611

response to wounding

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.

IEA

BP

GO:0030182

neuron differentiation

The process in which a relatively unspecialized cell acquires specialized features of a neuron.

IEA

BP

GO:0030855

epithelial cell differentiation

The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium.

IEA

BP

GO:0030903

notochord development

The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column.

IEA

BP

GO:0042476

odontogenesis

The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food.

IEA

BP

GO:0043065

positive regulation of apoptotic process

Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.

IEA

BP

GO:0043433

negative regulation of sequence-specific DNA binding transcription factor activity

Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription.

IDA

BP

GO:0045662

negative regulation of myoblast differentiation

Any process that stops, prevents, or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.

IEA

BP

GO:0045668

negative regulation of osteoblast differentiation

Any process that stops, prevents, or reduces the frequency, rate or extent of osteoblast differentiation.

IEA

BP

GO:0045892

negative regulation of transcription, DNA-templated

Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.

IDA

BP

GO:0051726

regulation of cell cycle

Any process that modulates the rate or extent of progression through the cell cycle.

IEA

BP

GO:0072750

cellular response to leptomycin B

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptomycin B stimulus.

IEA

CC

GO:0005634

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

IC

CC

GO:0005654

nucleoplasm

That part of the nuclear content other than the chromosomes or the nucleolus.

IDA

CC

GO:0005737

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

IEA

CC

GO:0015630

microtubule cytoskeleton

The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins.

IDA

MF

GO:0003700

transcription factor activity, sequence-specific DNA binding

Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.

IEA

MF

GO:0003714

transcription corepressor activity

Interacting selectively and non-covalently with a repressing transcription factor and also with the basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription. Cofactors generally do not bind the template nucleic acid, but rather mediate protein-protein interactions between repressive transcription factors and the basal transcription machinery.

TAS

MF

GO:0005515

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

IPI

MF

GO:0008134

transcription factor binding

Interacting selectively and non-covalently with a transcription factor, any protein required to initiate or regulate transcription.

IEA

MF

GO:0019904

protein domain specific binding

Interacting selectively and non-covalently with a specific domain of a protein.

IEA

MF

GO:0046983

protein dimerization activity

The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.

IEA

MF

GO:1901707

leptomycin B binding

Interacting selectively and non-covalently with leptomycin B.

IEA

Domain ID Description

IPR011598

Myc-type, basic helix-loop-helix (bHLH) domain

IPR026052

DNA-binding protein inhibitor

Pathway ID Pathway Term Pathway Source

hsa04350

TGF-beta signaling pathway

KEGG

hsa04550

Signaling pathways regulating pluripotency of stem cells

KEGG

WP53

ID signaling pathway

WikiPathways

WP236

Adipogenesis

WikiPathways

WP3594

Circadian rythm related genes

WikiPathways

UMLS CUI UMLS Term

C0001418

Adenocarcinoma

C0006413

Burkitt Lymphoma

C0009375

Colonic Neoplasms

C0024121

Lung Neoplasms

C0024667

Animal Mammary Neoplasms

C0024668

Mammary Neoplasms, Experimental

C0027765

Nervous System Disorder

C0031117

Peripheral Neuropathy

C0033578

Prostatic Neoplasms

C0035126

Reperfusion Injury

C0040128

Thyroid Diseases

C0151744

Myocardial Ischemia

Tissue Cell Type

adrenal gland

glandular cells

appendix

glandular cells

bone marrow

hematopoietic cells

breast

glandular cells

bronchus

respiratory epithelial cells

cervix, uterine

glandular cells

cervix, uterine

squamous epithelial cells

colon

endothelial cells

colon

glandular cells

colon

peripheral nerve/ganglion

endometrium

glandular cells

epididymis

glandular cells

esophagus

squamous epithelial cells

fallopian tube

glandular cells

gallbladder

glandular cells

lymph node

germinal center cells

nasopharynx

respiratory epithelial cells

oral mucosa

squamous epithelial cells

ovary

follicle cells

parathyroid gland

glandular cells

placenta

decidual cells

placenta

trophoblastic cells

rectum

glandular cells

salivary gland

glandular cells

skeletal muscle

myocytes

skin

fibroblasts

skin

keratinocytes

skin

Langerhans

skin

melanocytes

skin

epidermal cells

small intestine

glandular cells

smooth muscle

smooth muscle cells

stomach

glandular cells

testis

cells in seminiferous ducts

thyroid gland

glandular cells

tonsil

non-germinal center cells

tonsil

squamous epithelial cells

urinary bladder

urothelial cells

vagina

squamous epithelial cells

No databases found.

Pubmed ID Author Year Title

12734205

Wood et al.

2003

The Molecular Phenotype of Polycystic Ovary Syndrome (PCOS) Theca Cells and New Candidate PCOS Genes Defined by Microarray Analysis

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

Gene Symbol Entrez ID Uniprot ID Score

RUNX1T1

862

Q06455

0.59

CSK

1445

P41240

0.63

NKX2-5

1482

P52952

0.63

FHL2

2274

Q14192

0.63

GNB2

2783

P62879

0.63

TCEB1

6921

Q15369

0.63

MLX

6945

Q9UH92

0.63

VHL

7428

P40337

0.63

IKBKG

8517

Q9Y6K9

0.63

SAP30

8819

O75446

0.63

CBFA2T2

9139

O43439

0.63

PRDM14

63978

Q9GZV8

0.63

ZNF408

79797

Q9H9D4

0.63

FAM74A1

401507

Q5RGS3

0.63

MYF5

4617

P13349

0.67

GATA4

2626

P43694

0.68

SREBF1

6720

P36956

0.71

PAX5

5079

Q02548

0.73

TCF12

6938

Q99081

0.73

ID3

3399

Q02535

0.76

ELSPBP1

64100

Q96BH3

0.76

MYOD1

4654

P15172

0.86

TCF3

6929

P15923

0.96

FAM74A4

401508

Q5TZK3

0.49

ELK1

2002

P19419

0.52

ELK4

2005

P28324

0.52

IFI16

3428

Q16666

0.55

CDK2

1017

P24941

0.58

ATF3

467

P18847

0.63

E2F4

1874

Q16254

0.63

HES1

3280

Q14469

0.63

MYOG

4656

P15173

0.63

CNOT3

4849

O75175

0.63

TSC1

7248

Q92574

0.63

ZNF3

7551

P17036

0.63

PUF60

22827

Q9UHX1

0.63

RND1

27289

Q92730

0.63

UNK

85451

Q9C0B0

0.63

ZNF626

199777

Q68DY1

0.63

ID4

3400

P47928

0.65

SMURF2

64750

Q9HAU4

0.65

ADD1

118

P35611

0.75

GTF2A1L

11036

Q9UNN4

0.75

MYF6

4618

P23409

0.77

TCF4

6925

P15884

0.97