Protein Description

Gene Symbol HMGCL
Entrez ID 3155
Uniprot ID P35914
Description 3-hydroxymethyl-3-methylglutaryl-CoA lyase
Chromosomal Location chr1: 23,801,885-23,838,620
Ontology GO ID GO Term Definition Evidence

BP

GO:0001889

liver development

The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes.

IEA

BP

GO:0006552

leucine catabolic process

The chemical reactions and pathways resulting in the breakdown of leucine, 2-amino-4-methylpentanoic acid.

NAS|TAS

BP

GO:0006629

lipid metabolic process

The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.

IDA

BP

GO:0006637

acyl-CoA metabolic process

The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with an acyl group.

IEA

BP

GO:0007005

mitochondrion organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components.

IEA

BP

GO:0007584

response to nutrient

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus.

IEA

BP

GO:0042594

response to starvation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nourishment.

IEA

BP

GO:0046951

ketone body biosynthetic process

The chemical reactions and pathways resulting in the formation of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Biosynthesis involves the formation of hydroxymethylglutaryl-CoA, which is cleaved to acetate and acetyl-CoA.

IDA|TAS

BP

GO:0051262

protein tetramerization

The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits.

IDA

BP

GO:0070542

response to fatty acid

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.

IEA

CC

GO:0005739

mitochondrion

A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

IDA

CC

GO:0005743

mitochondrial inner membrane

The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.

IEA

CC

GO:0005759

mitochondrial matrix

The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.

NAS|TAS

CC

GO:0005777

peroxisome

A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.

IDA

MF

GO:0000062

fatty-acyl-CoA binding

Interacting selectively and non-covalently with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group.

IEA

MF

GO:0000287

magnesium ion binding

Interacting selectively and non-covalently with magnesium (Mg) ions.

IDA

MF

GO:0004419

hydroxymethylglutaryl-CoA lyase activity

Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetoacetate + acetyl-CoA.

IDA|TAS

MF

GO:0005102

receptor binding

Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.

IPI

MF

GO:0030145

manganese ion binding

Interacting selectively and non-covalently with manganese (Mn) ions.

IDA

MF

GO:0031406

carboxylic acid binding

Interacting selectively and non-covalently with a carboxylic acid, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).

IEA

MF

GO:0042803

protein homodimerization activity

Interacting selectively and non-covalently with an identical protein to form a homodimer.

IDA

MF

GO:0046872

metal ion binding

Interacting selectively and non-covalently with any metal ion.

IDA

Domain ID Description

IPR000138

Hydroxymethylglutaryl-CoA lyase, active site

IPR000891

Pyruvate carboxyltransferase

IPR013785

Aldolase-type TIM barrel

IPR030020

Hydroxymethylglutaryl-CoA lyase, mitochondrial

Pathway ID Pathway Term Pathway Source

hsa00072

Synthesis and degradation of ketone bodies

KEGG

hsa00280

Valine, leucine and isoleucine degradation

KEGG

hsa00650

Butanoate metabolism

KEGG

hsa01100

Metabolic pathways

KEGG

hsa04146

Peroxisome

KEGG

WP3925

Amino Acid metabolism

WikiPathways

WP311

Synthesis and Degradation of Ketone Bodies

WikiPathways

No diseases found.

Tissue Cell Type

epididymis

glandular cells

gallbladder

glandular cells

kidney

cells in tubules

liver

bile duct cells

liver

hepatocytes

lung

macrophages

nasopharynx

respiratory epithelial cells

pancreas

exocrine glandular cells

parathyroid gland

glandular cells

rectum

glandular cells

seminal vesicle

glandular cells

skin

melanocytes

stomach

glandular cells

No databases found.

Pubmed ID Author Year Title

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

22951915

Haozi et al.

2012

Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome

Gene Symbol Entrez ID Uniprot ID Score

TOMM40

10452

O96008

0.49

LSM12

124801

Q3MHD2

0.49

ACADVL

37

P49748

0.63

ALAS1

211

P13196

0.63

FPGS

2356

Q05932

0.63

GLS

2744

O94925

0.63

GTF2B

2959

Q00403

0.63

HES1

3280

Q14469

0.63

DNAJA1

3301

P31689

0.63

FBXO21

23014

O94952

0.63

ARL6IP1

23204

Q15041

0.63

RNF126

55658

Q9BV68

0.63

MS4A7

58475

Q9GZW8

0.63

ADAMTS10

81794

Q9H324

0.63

PNPT1

87178

Q8TCS8

0.63

MGME1

92667

Q9BQP7

0.63

PEX5

5830

P50542

0.49

PIR

8544

O00625

0.49

MCCC2

64087

Q9HCC0

0.49

SIRT4

23409

Q9Y6E7

0.63