Gene Symbol | HMGCL |
Entrez ID | 3155 |
Uniprot ID | P35914 |
Description | 3-hydroxymethyl-3-methylglutaryl-CoA lyase |
Chromosomal Location | chr1: 23,801,885-23,838,620 |
Ontology | GO ID | GO Term | Definition | Evidence |
---|---|---|---|---|
BP |
GO:0001889 |
liver development |
The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes. |
IEA |
BP |
GO:0006552 |
leucine catabolic process |
The chemical reactions and pathways resulting in the breakdown of leucine, 2-amino-4-methylpentanoic acid. |
NAS|TAS |
BP |
GO:0006629 |
lipid metabolic process |
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
IDA |
BP |
GO:0006637 |
acyl-CoA metabolic process |
The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with an acyl group. |
IEA |
BP |
GO:0007005 |
mitochondrion organization |
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components. |
IEA |
BP |
GO:0007584 |
response to nutrient |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus. |
IEA |
BP |
GO:0042594 |
response to starvation |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nourishment. |
IEA |
BP |
GO:0046951 |
ketone body biosynthetic process |
The chemical reactions and pathways resulting in the formation of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Biosynthesis involves the formation of hydroxymethylglutaryl-CoA, which is cleaved to acetate and acetyl-CoA. |
IDA|TAS |
BP |
GO:0051262 |
protein tetramerization |
The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits. |
IDA |
BP |
GO:0070542 |
response to fatty acid |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus. |
IEA |
CC |
GO:0005739 |
mitochondrion |
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
IDA |
CC |
GO:0005743 |
mitochondrial inner membrane |
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae. |
IEA |
CC |
GO:0005759 |
mitochondrial matrix |
The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation. |
NAS|TAS |
CC |
GO:0005777 |
peroxisome |
A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism. |
IDA |
MF |
GO:0000062 |
fatty-acyl-CoA binding |
Interacting selectively and non-covalently with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group. |
IEA |
MF |
GO:0000287 |
magnesium ion binding |
Interacting selectively and non-covalently with magnesium (Mg) ions. |
IDA |
MF |
GO:0004419 |
hydroxymethylglutaryl-CoA lyase activity |
Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetoacetate + acetyl-CoA. |
IDA|TAS |
MF |
GO:0005102 |
receptor binding |
Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
IPI |
MF |
GO:0030145 |
manganese ion binding |
Interacting selectively and non-covalently with manganese (Mn) ions. |
IDA |
MF |
GO:0031406 |
carboxylic acid binding |
Interacting selectively and non-covalently with a carboxylic acid, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-). |
IEA |
MF |
GO:0042803 |
protein homodimerization activity |
Interacting selectively and non-covalently with an identical protein to form a homodimer. |
IDA |
MF |
GO:0046872 |
metal ion binding |
Interacting selectively and non-covalently with any metal ion. |
IDA |
Domain ID | Description |
---|---|
IPR000138 |
Hydroxymethylglutaryl-CoA lyase, active site |
IPR000891 |
Pyruvate carboxyltransferase |
IPR013785 |
Aldolase-type TIM barrel |
IPR030020 |
Hydroxymethylglutaryl-CoA lyase, mitochondrial |
Pathway ID | Pathway Term | Pathway Source |
---|---|---|
hsa00072 |
Synthesis and degradation of ketone bodies |
KEGG |
hsa00280 |
Valine, leucine and isoleucine degradation |
KEGG |
hsa00650 |
Butanoate metabolism |
KEGG |
hsa01100 |
Metabolic pathways |
KEGG |
hsa04146 |
Peroxisome |
KEGG |
WP3925 |
Amino Acid metabolism |
WikiPathways |
WP311 |
Synthesis and Degradation of Ketone Bodies |
WikiPathways |
Tissue | Cell Type |
---|---|
epididymis |
glandular cells |
gallbladder |
glandular cells |
kidney |
cells in tubules |
liver |
bile duct cells |
liver |
hepatocytes |
lung |
macrophages |
nasopharynx |
respiratory epithelial cells |
pancreas |
exocrine glandular cells |
parathyroid gland |
glandular cells |
rectum |
glandular cells |
seminal vesicle |
glandular cells |
skin |
melanocytes |
stomach |
glandular cells |
Pubmed ID | Author | Year | Title |
---|---|---|---|
22617121 |
Ouandaogo et al. |
2012 |
Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation |
22951915 |
Haozi et al. |
2012 |
Altered gene expression profile in cumulus cells of mature MII oocytes from patients with polycystic ovary syndrome |
Gene Symbol | Entrez ID | Uniprot ID | Score |
---|---|---|---|
TOMM40 |
10452 |
O96008 |
0.49 |
LSM12 |
124801 |
Q3MHD2 |
0.49 |
ACADVL |
37 |
P49748 |
0.63 |
ALAS1 |
211 |
P13196 |
0.63 |
FPGS |
2356 |
Q05932 |
0.63 |
GLS |
2744 |
O94925 |
0.63 |
GTF2B |
2959 |
Q00403 |
0.63 |
HES1 |
3280 |
Q14469 |
0.63 |
DNAJA1 |
3301 |
P31689 |
0.63 |
FBXO21 |
23014 |
O94952 |
0.63 |
ARL6IP1 |
23204 |
Q15041 |
0.63 |
RNF126 |
55658 |
Q9BV68 |
0.63 |
MS4A7 |
58475 |
Q9GZW8 |
0.63 |
ADAMTS10 |
81794 |
Q9H324 |
0.63 |
PNPT1 |
87178 |
Q8TCS8 |
0.63 |
MGME1 |
92667 |
Q9BQP7 |
0.63 |
PEX5 |
5830 |
P50542 |
0.49 |
PIR |
8544 |
O00625 |
0.49 |
MCCC2 |
64087 |
Q9HCC0 |
0.49 |
SIRT4 |
23409 |
Q9Y6E7 |
0.63 |