Protein Description

Gene Symbol HMGB3
Entrez ID 3149
Uniprot ID O15347
Description high mobility group box 3
Chromosomal Location chrX: 150,980,509-150,990,775
Ontology GO ID GO Term Definition Evidence

BP

GO:0006310

DNA recombination

Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.

ISS

BP

GO:0006351

transcription, DNA-templated

The cellular synthesis of RNA on a template of DNA.

IEA

BP

GO:0006355

regulation of transcription, DNA-templated

Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

IEA

BP

GO:0007275

multicellular organism development

The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

TAS

BP

GO:0032392

DNA geometric change

The process in which a transformation is induced in the geometry of a DNA double helix, resulting in a change in twist, writhe, or both, but with no change in linking number. Includes the unwinding of double-stranded DNA by helicases.

ISS

BP

GO:0045087

innate immune response

Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.

IEA

BP

GO:0045596

negative regulation of cell differentiation

Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation.

IEA

CC

GO:0005634

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

IEA

CC

GO:0005694

chromosome

A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.

IEA

CC

GO:0005737

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

IEA

MF

GO:0000400

four-way junction DNA binding

Interacting selectively and non-covalently with DNA containing four-way junctions, also known as Holliday junctions, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices.

ISS

MF

GO:0003690

double-stranded DNA binding

Interacting selectively and non-covalently with double-stranded DNA.

ISS

MF

GO:0005515

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

IPI

MF

GO:0008301

DNA binding, bending

The activity of binding selectively and non-covalently to and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.

ISS

MF

GO:0044822

poly(A) RNA binding

Interacting non-covalently with a poly(A) RNA, a RNA molecule which has a tail of adenine bases.

IDA

Domain ID Description

IPR009071

High mobility group box domain

IPR017967

HMG box A DNA-binding domain, conserved site

No pathways found.

No diseases found.

Tissue Cell Type

bronchus

respiratory epithelial cells

nasopharynx

respiratory epithelial cells

No databases found.

Pubmed ID Author Year Title

22617121

Ouandaogo et al.

2012

Differences in transcriptomic profiles of human cumulus cells isolated from oocytes at GV, MI and MII stages after in vivo andin vitro oocyte maturation

Gene Symbol Entrez ID Uniprot ID Score

SSRP1

6749

Q08945

0.49

SUPT16H

11198

Q9Y5B9

0.49

EXOSC4

54512

Q9NPD3

0.49

NUCKS1

64710

Q9H1E3

0.49

ACAT2

39

Q9BWD1

0.63

ALDH7A1

501

P49419

0.63

GSS

2937

P48637

0.63

SDCBP

6386

O00560

0.63

YWHAH

7533

Q04917

0.63

PDIA4

9601

P13667

0.63

SCRN1

9805

Q12765

0.63

DDX19A

55308

Q9NUU7

0.63

EWSR1

2130

Q01844

0.49

HIST1H3A

8350

P68431

0.49

MOV10

4343

Q9HCE1

0.63

PAFAH1B1

5048

P43034

0.63

TFAP4

7023

Q01664

0.63

DENR

8562

O43583

0.63

PAPSS1

9061

O43252

0.63

NXF1

10482

Q9UBU9

0.63

MCTS1

28985

Q9ULC4

0.63

UBXN1

51035

Q04323

0.63

IPO9

55705

Q96P70

0.63

CAND1

55832

Q86VP6

0.63

HMGA1

3159

P17096

0.72

TERF2IP

54386

Q9NYB0

0.75