Protein Description

Gene Symbol HLA-DQA1
Entrez ID 3117
Uniprot ID P01909
Description major histocompatibility complex, class II, DQ alpha 1
Chromosomal Location chr6: 32,628,179-32,647,062
Ontology GO ID GO Term Definition Evidence

BP

GO:0006955

immune response

Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.

NAS

BP

GO:0019886

antigen processing and presentation of exogenous peptide antigen via MHC class II

The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.

TAS

BP

GO:0031295

T cell costimulation

The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation.

TAS

BP

GO:0050852

T cell receptor signaling pathway

A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell.

TAS

BP

GO:0060333

interferon-gamma-mediated signaling pathway

A series of molecular signals initiated by the binding of interferon-gamma to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription. Interferon gamma is the only member of the type II interferon found so far.

TAS

CC

GO:0000139

Golgi membrane

The lipid bilayer surrounding any of the compartments of the Golgi apparatus.

TAS

CC

GO:0005765

lysosomal membrane

The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.

TAS

CC

GO:0005886

plasma membrane

The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

TAS

CC

GO:0005887

integral component of plasma membrane

The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

NAS

CC

GO:0010008

endosome membrane

The lipid bilayer surrounding an endosome.

IEA

CC

GO:0012507

ER to Golgi transport vesicle membrane

The lipid bilayer surrounding a vesicle transporting substances from the endoplasmic reticulum to the Golgi.

TAS

CC

GO:0016020

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

IDA

CC

GO:0030658

transport vesicle membrane

The lipid bilayer surrounding a transport vesicle.

TAS

CC

GO:0030666

endocytic vesicle membrane

The lipid bilayer surrounding an endocytic vesicle.

TAS

CC

GO:0030669

clathrin-coated endocytic vesicle membrane

The lipid bilayer surrounding a clathrin-coated endocytic vesicle.

TAS

CC

GO:0032588

trans-Golgi network membrane

The lipid bilayer surrounding any of the compartments that make up the trans-Golgi network.

TAS

CC

GO:0042613

MHC class II protein complex

A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen.

ISS

CC

GO:0071556

integral component of lumenal side of endoplasmic reticulum membrane

The component of the endoplasmic reticulum membrane consisting of the gene products that penetrate only the lumenal side of the membrane.

TAS

MF

GO:0032395

MHC class II receptor activity

Combining with an MHC class II protein complex and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.

NAS|TAS

MF

GO:0042605

peptide antigen binding

Interacting selectively and non-covalently with an antigen peptide.

ISS

Domain ID Description

IPR001003

MHC class II, alpha chain, N-terminal

IPR003006

Immunoglobulin/major histocompatibility complex, conserved site

IPR003597

Immunoglobulin C1-set

IPR007110

Immunoglobulin-like domain

IPR011162

MHC classes I/II-like antigen recognition protein

IPR013783

Immunoglobulin-like fold

IPR014745

MHC class II, alpha/beta chain, N-terminal

IPR032431

Immunoglobulin C1-set, C-terminal extension

Pathway ID Pathway Term Pathway Source

hsa04145

Phagosome

KEGG

hsa04514

Cell adhesion molecules (CAMs)

KEGG

hsa04612

Antigen processing and presentation

KEGG

hsa04640

Hematopoietic cell lineage

KEGG

hsa04658

Th1 and Th2 cell differentiation

KEGG

hsa04659

Th17 cell differentiation

KEGG

hsa04672

Intestinal immune network for IgA production

KEGG

hsa04940

Type I diabetes mellitus

KEGG

hsa05140

Leishmaniasis

KEGG

hsa05145

Toxoplasmosis

KEGG

hsa05150

Staphylococcus aureus infection

KEGG

hsa05152

Tuberculosis

KEGG

hsa05164

Influenza A

KEGG

hsa05166

HTLV-I infection

KEGG

hsa05168

Herpes simplex infection

KEGG

hsa05169

Epstein-Barr virus infection

KEGG

hsa05310

Asthma

KEGG

hsa05320

Autoimmune thyroid disease

KEGG

hsa05321

Inflammatory bowel disease (IBD)

KEGG

hsa05322

Systemic lupus erythematosus

KEGG

hsa05323

Rheumatoid arthritis

KEGG

hsa05330

Allograft rejection

KEGG

hsa05332

Graft-versus-host disease

KEGG

hsa05416

Viral myocarditis

KEGG

WP2328

Allograft Rejection

WikiPathways

UMLS CUI UMLS Term

C0004096

Asthma

C0007570

Celiac Disease

C0009324

Ulcerative Colitis

C0011603

Dermatitis

C0011854

Diabetes Mellitus, Insulin-Dependent

C0014848

Esophageal Achalasia

C0017665

Membranous Glomerulonephritis

C0020517

Hypersensitivity

C0023290

Leishmaniasis, Visceral

C0023434

Chronic Lymphocytic Leukemia

C0024141

Lupus Erythematosus, Systemic

C0030305

Pancreatitis

C0033687

Proteinuria

C0085179

Eosinophilia-Myalgia Syndrome

C0086445

Idiopathic Membranous Glomerulonephritis

Tissue Cell Type

adrenal gland

glandular cells

gallbladder

glandular cells

lung

macrophages

lymph node

germinal center cells

lymph node

non-germinal center cells

tonsil

germinal center cells

tonsil

non-germinal center cells

No databases found.

Pubmed ID Author Year Title

15308691

Jansen et al.

2004

Abnormal Gene Expression Profiles in Human Ovaries from Polycystic Ovary Syndrome Patients

17062763

Corton et al.

2007

Differential Gene Expression Profile in Omental Adipose Tissue in Women with Polycystic Ovary Syndrome

Gene Symbol Entrez ID Uniprot ID Score

RIF1

55183

Q5UIP0

0.49

APLP1

333

P51693

0.63

TLE1

7088

Q04724

0.63

UNC119

9094

Q13432

0.63

SH3GL2

6456

Q99962

0.63

IKBKG

8517

Q9Y6K9

0.63

ATP2B2

491

Q01814

0.63

ATP6V0A1

535

Q93050

0.63

CUX1

1523

Q13948

0.63

EFNB1

1947

P98172

0.63

GALT

2592

P07902

0.63

HLA-A

3105

P30443

0.63

KCNJ8

3764

Q15842

0.63

SMPD2

6610

O60906

0.63

NR2F2

7026

P24468

0.63

ST7

7982

Q9NRC1

0.63

SLC30A9

10463

Q6PML9

0.63

DDX19B

11269

Q9UMR2

0.63

ATP6V0A2

23545

Q9Y487

0.63

SLC27A6

28965

Q9Y2P4

0.63

TMEM214

54867

Q6NUQ4

0.63

TMEM57

55219

Q8N5G2

0.63

LRIF1

55791

Q5T3J3

0.63

MYO19

80179

Q96H55

0.63

TMEM246

84302

Q9BRR3

0.63

TMEM219

124446

Q86XT9

0.63

SLC38A9

153129

Q8NBW4

0.63

MFSD8

256471

Q8NHS3

0.63

HCRT

3060

O43612

0.72

HLA-DQB1

3119

P01920

0.82

CD74

972

P04233

0.73

CDK7

1022

P50613

0.49