pathway_id,pathway_term,pathway_source,proteins
h_tall1Pathway,"TACI and BCMA stimulation of B cell immune responses",BioCarta,MAPK14;NFKB1;MAPK8;RELA;TNFSF13;TNFSF13B
hsa04060,"Cytokine-cytokine receptor interaction",KEGG,"TNFSF13B;CSF1R;CSF3R;CTF1;EGFR;EPOR;FLT4;CLCF1;AMH;GH1;AMHR2;GHR;TNFRSF21;CXCL1;CXCL2;HGF;IFNE;IFNA1 ;IFNA16;IFNAR1;IFNAR2;IFNGR1;IFNGR2;FAS;IL1A;IL1B;IL1R1;IL1RAP;IL4R;IL5RA;IL6;IL6R;IL6ST;IL7R;CXCL8;CXCR2;IL9R;IL10;IL10RB;IL11;IL12A;IL12RB1;IL18;INHBA;INHBB;INHBC;KIT;LEP;LEPR;LIF;LIFR;LTBR;MET;KITLG;NGFR;TNFRSF11B;TNFRSF12A;PDGFA;PDGFB;PDGFRA;PDGFRB;PF4;PPBP;TNFRSF19;IL17RB;PDGFC;PRL;PRLR;CXCL16;CCL2;CCL3;CCL4;CCL5;CCL8;CCL20;CXCL6;CXCL5;CXCL12;BMP2;BMPR1A;BMPR2;TGFB1;TGFB2;TGFBR1;TGFBR2;TNF;TNFRSF1B;TNFSF4;VEGFA;VEGFB;VEGFC;IL1R2;CXCR4;GDF5;TNFSF11;TNFRSF25;TNFSF13;TNFSF10;TNFRSF11A;TNFRSF10C;IL18R1;ACVR1;ACVR1B;OSMR;ACVR2A;ACVR2B;CD27;TNFRSF8;CXCL14;CD40LG"
hsa04064,"NF-kappa B signaling pathway",KEGG,TAB1;TNFSF13B;TIRAP;PARP1;ERC1;TAB3;CXCL2;BLNK;CARD10;BIRC3;XIAP;ICAM1;IL1B;IL1R1;CXCL8;IRAK1;LTBR;LYN;GADD45B;NFKB1;PLAU;PLCG2;PRKCB;PRKCQ;PTGS2;BCL2;RELA;RELB;CCL4;CXCL12;SYK;MAP3K7;TLR4;TNF;TNFAIP3;TRAF1;UBE2I;VCAM1;TRIM25;TNFSF11;TRADD;RIPK1;TNFRSF11A;CFLAR;BCL10;CD14;CD40LG
hsa04672,"Intestinal immune network for IgA production",KEGG,TNFSF13B;HLA-DMA;HLA-DMB;HLA-DOB;HLA-DPA1;HLA-DQA1;HLA-DQA2;HLA-DQB1;HLA-DRA;HLA-DRB1;HLA-DRB3;HLA-DRB4;HLA-DRB5;IL6;IL10;LTBR;CXCL12;TGFB1;CXCR4;TNFSF13;CD28;CD40LG
hsa05323,"Rheumatoid arthritis",KEGG,TCIRG1;TNFSF13B;CTSK;CTSL;FOS;ATP6V1C2;ANGPT1;CXCL1;HLA-DMA;HLA-DMB;HLA-DOB;HLA-DPA1;HLA-DQA1;HLA-DQA2;HLA-DQB1;HLA-DRA;HLA-DRB1;HLA-DRB3;HLA-DRB4;HLA-DRB5;ICAM1;IL1A;IL1B;IL6;CXCL8;IL11;IL18;ITGB2;JUN;MMP1;ATP6V1D;ATP6V1H;ATP6V1B2;ATP6V1C1;ATP6V1G2;ATP6V0A1;CCL2;CCL3;CCL5;CCL20;CXCL6;CXCL5;CXCL12;TEK;TGFB1;TGFB2;TLR2;TLR4;TNF;VEGFA;TNFSF11;TNFSF13;TNFRSF11A;ATP6V0E1;ATP6V0D1;ATP6V1F;CD28;ATP6V1G1
WP2431,"Spinal Cord Injury",WikiPathways,ZFP36;TNFSF13;CCL2;PRB1;MMP9;PTGS2;SLIT2;PLXNA2;IL1A;FCGR2A;MYC;SEMA6A;TNFSF13B;ACAN;TGFB1;GADD45A;GAP43;MAG;BDNF;NGFR;VCAN;RTN4;FOXO3;CSPG4;NCAN;VIM;CDC42;E2F1;CXCL1;PRKCA;TNF;CDK1;ICAM1;RHOB;RHOA;CXCL8;SOX9;BTG2;PLA2G2A;EFNB2;ANXA1;PLA2G5;RB1;LEP;MAPK3;LGALS3;RAC1;MAPK1;EGR1;EGFR;CDKN1B;CD47;GJA1;IL1B;IL1R1;BCAN;ROCK2;EPHA4;CDK2;CXCL2;CDK4;CHST11;TP53;PPP3CA;MIF;NR4A1;NOX4;TLR4;FOS;CCNG1;IL6