pathway_id,pathway_term,pathway_source,proteins
h_cd40Pathway,"CD40L Signaling Pathway",BioCarta,CD40LG;DUSP1;NFKB1;RELA;TNFAIP3;IKBKAP
h_nfkbPathway,"NF-kB Signaling Pathway",BioCarta,IRAK1;NFKB1;RELA;MAP3K7;TLR4;TNF;TNFAIP3;TNFRSF1B;TRADD;RIPK1;FADD;TAB1;IL1A;IL1R1
h_tnfr2Pathway,"TNFR2 Signaling Pathway",BioCarta,NFKB1;RELA;DUSP1;TNFAIP3;TNFRSF1B;TRAF1;IKBKAP;RIPK1;TANK
hsa04064,"NF-kappa B signaling pathway",KEGG,TAB1;TNFSF13B;TIRAP;PARP1;ERC1;TAB3;CXCL2;BLNK;CARD10;BIRC3;XIAP;ICAM1;IL1B;IL1R1;CXCL8;IRAK1;LTBR;LYN;GADD45B;NFKB1;PLAU;PLCG2;PRKCB;PRKCQ;PTGS2;BCL2;RELA;RELB;CCL4;CXCL12;SYK;MAP3K7;TLR4;TNF;TNFAIP3;TRAF1;UBE2I;VCAM1;TRIM25;TNFSF11;TRADD;RIPK1;TNFRSF11A;CFLAR;BCL10;CD14;CD40LG
hsa04621,"NOD-like receptor signaling pathway",KEGG,"TANK;NAMPT;IRF9;TAB1;TXNIP;SUGT1;GABARAP;GABARAPL2;CARD16;ANTXR2;NEK7;MAPK14;CTSB;CYBB;PLCB1;GABARAPL1;PANX1;TAB3;TXN2;GBP1;GBP2;GBP3;PYCARD;TBK1;CXCL1;CXCL2;BIRC3;XIAP;HSP90AA1;HSP90AB1;IFI16;IFNA1 ;IFNA16;IFNAR1;IFNAR2;IL1B;IL6;CXCL8;IL18;ITPR1;ITPR2;ITPR3;JAK1;JUN;RHOA;NFKB1;TRPV2;TRPM7;PRKCD;MAPK1;MAPK3;MAPK8;MAPK9;MAPK13;MAVS;BCL2;RELA;RNASEL;CCL2;CCL5;STAT2;MAP3K7;TLR4;TNF;TNFAIP3;TRIP6;TXN;VDAC2;VDAC3;BRCC3;CASP1;CASP4;CASP8;RIPK1;RIPK2;FADD;ATG12;MFN2"
hsa04657,"IL-17 signaling pathway",KEGG,CEBPB;TRAF3IP2;MAPK14;ELAVL1;FOS;FOSB;TAB3;TBK1;CXCL1;CXCL2;GSK3B;USP25;HSP90AA1;HSP90AB1;IL1B;IL6;CXCL8;JUN;JUND;LCN2;MMP1;MMP9;MUC5AC;NFKB1;ANAPC5;IL17RB;MAPK1;MAPK3;MAPK7;MAPK8;MAPK9;MAPK13;PTGS2;RELA;S100A7;S100A8;S100A9;CCL2;CCL20;CXCL6;CXCL5;SRSF1;MAP3K7;TNF;TNFAIP3;HSP90B1;FOSL1;CASP8;TRADD;FADD
hsa04668,"TNF signaling pathway",KEGG,AKT3;TAB1;CEBPB;MAP3K8;CREB1;MAPK14;JAG1;EDN1;AKT1;AKT2;FOS;TAB3;CXCL1;CXCL2;BIRC3;ICAM1;FAS;IL1B;IL6;JUN;JUNB;LIF;MAP3K5;MMP9;MMP14;ATF4;NFKB1;PIK3CA;PIK3CB;PIK3CD;PIK3R1;MAPK1;MAPK3;MAPK8;MAPK9;MAPK13;MAP2K1;MAP2K6;MAP2K7;PTGS2;RELA;BCL3;CCL2;CCL5;CCL20;CXCL5;SELE;MAP3K7;TNF;TNFAIP3;TNFRSF1B;TRAF1;VCAM1;VEGFC;ITCH;CASP8;TRADD;RIPK1;FADD;IL18R1;CFLAR;SOCS3;CREB3L1;RPS6KA5;CREB5
hsa05162,Measles,KEGG,"AKT3;CDK2;CDK4;CDK6;CDKN1B;IRF9;RACK1;DOK1;EIF2S1;AKT1;AKT2;FCGR2B;FYN;BBC3;TBK1;GSK3B;CD209;HSPA1A;HSPA1B;HSPA1L;HSPA6;IFNA1 ;IFNA16;IFNAR1;IFNAR2;IFNGR1;IFNGR2;FAS;IL1A;IL1B;IL6;IL12A;IRAK1;JAK1;JAK2;JAK3;CD46;EIF2AK4;NFKB1;PIK3CA;PIK3CB;PIK3CD;PIK3R1;PRKCQ;MAVS;RELA;STAT2;STAT3;STAT5A;STAT5B;MAP3K7;TLR2;TLR4;TNFAIP3;TP53;CBLB;TNFSF10;TNFRSF10C;CCND2;CCND3;CCNE2;RAB9A;CD28"
hsa05169,"Epstein-Barr virus infection",KEGG,AKT3;HDAC5;CDK2;CDKN1A;CDKN1B;TAB1;POLR3F;POLR3G;POLR3C;ADRM1;CREBBP;MAPK14;EP300;AKT1;AKT2;FGR;POLR2J2;TBK1;GSK3B;GTF2B;HDAC1;HDAC2;HLA-A;HLA-B;HLA-C;HLA-DPA1;HLA-DQA1;HLA-DQA2;HLA-DQB1;HLA-DRA;HLA-DRB1;HLA-DRB3;HLA-DRB4;HLA-DRB5;HLA-E;HLA-F;HLA-G;HSPA1A;HSPA1B;HSPA1L;HSPA6;HSPB1;HSPB2;ICAM1;IL10;IL10RB;IRAK1;JAK1;JAK3;JUN;LYN;MDM2;EIF2AK4;MYC;NFKB1;POLR1D;POLR3K;PIK3CA;PIK3CB;PIK3CD;PIK3R1;PLCG2;POLR2A;POLR2B;POLR2D;POLR2E;POLR2G;POLR2I;POLR2J;POLR2K;POLR2L;PRKACA;POLR3B;MAPK8;MAPK9;MAPK13;MAP2K6;MAP2K7;PSMC1;PSMC2;PSMC3;PSMC4;PSMC6;PSMD2;PSMD3;PSMD7;PSMD11;PSMD12;PTMA;RB1;BCL2;RELA;RELB;SKP2;STAT3;SYK;MAP3K7;TNFAIP3;TP53;TRAF1;VIM;XPO1;YWHAB;YWHAE;YWHAH;YWHAZ;SHFM1;POLR3GL;TRADD;RIPK1;CCNA2;CCNA1;POLR1C;ENTPD3;CD44;NCOR2;CD58;HDAC4;CDK1
WP1449,"Regulation of toll-like receptor signaling pathway",WikiPathways,"JUN;CCL3;CCL5;CCL4;RIPK1;SQSTM1;TREM1;PELI1;PELI2;MAP3K7;MAP3K8;AKT1;AKT2;TRAFD1;CD14;MLST8;CTNNAL1;AKT3;SPP1;NFKB1;TLR5;TIRAP;MAPK14;RELA;SOCS1;TOLLIP;RNF216;PLK1;SARM1;SMAD6;CASP8;TAB3;SIGIRR;TNF;FADD;MBL2;CXCL8;MAPK9;MAP2K2;MAPK13;IL12A;MAP2K1;MAP2K7;MAP2K6;FBXW5;IFNA1 ;IFNA16;TNFAIP3;MAPK3;RAC1;MAPK1;MAPK8;SYK;IFNAR1;IFNAR2;CYLD;IRAK2;IL1B;IRAK1;ZMYND11;IRAK3;TBK1;PIK3CA;PIK3CB;PIK3CD;TLR3;TLR4;TAB1;TLR1;FOS;TLR2;PIK3CG;PIK3R1;IL6"
WP231,"TNF alpha Signaling Pathway",WikiPathways,JUN;CASP9;CASP8;TAB3;RAF1;TXN;TNF;CCL2;BIRC3;FADD;CFLAR;CREBBP;RIPK1;BAD;OTUD7B;MAPK9;MAP3K5;BID;PSMD2;BAX;CDC37;MAP2K7;MAP3K8;MAP2K6;MAP3K7;TNFRSF1B;AKT1;NRAS;GRB2;RFFL;TNFAIP3;MAPK3;NFKB1;RAC1;SOS1;MAPK1;NSMAF;MAPK8;RFK;SELE;KRAS;BTRC;SKP1;TANK;HSP90AA1;PLK1;TRAF1;TRADD;REL;TBK1;TAB1;IL6