pathway_id,pathway_term,pathway_source,proteins
h_atmPathway,"ATM Signaling Pathway",BioCarta,BRCA1;CDKN1A;CHEK1;GADD45A;JUN;MDM2;MRE11A;NBN;NFKB1;MAPK8;RAD51;RELA;TP53;RAD50
h_atrbrcaPathway,"Role of BRCA1,  BRCA2 and ATR in Cancer Susceptibility",BioCarta,BRCA1;CHEK1;FANCD2;FANCE;FANCG;TP53;BRCA2;MRE11A;NBN;RAD1;RAD9A;RAD51;RAD50
hsa03440,"Homologous recombination",KEGG,RAD50;POLD3;TOPBP1;EME1;RAD54B;MRE11A;NBN;POLD1;POLD4;BARD1;RAD51;RAD51C;RAD51D;RPA3;BLM;BRCA1;SSBP1;BRCA2;BRCC3;SHFM1;RAD54L
hsa03450,"Non-homologous end-joining",KEGG,RAD50;FEN1;MRE11A;PRKDC;DCLRE1C;XRCC4;XRCC5
WP1530,"miRNA Regulation of DNA Damage Response",WikiPathways,CASP9;CASP8;SFN;E2F1;CDK1;GADD45B;RAD51;MRE11A;BID;BRCA1;RAD9A;BAX;MDM2;CREB1;RB1;PMAIP1;TLK1;GADD45G;MIR17HG;PRKDC;MYC;SMC1A;MIR21;NBN;ATRIP;CDKN1B;CDKN1A;BBC3;GADD45A;RAD50;FANCD2;MCM7;CDK2;CHEK1;SESN1;CDK4;H2AFX;TP53;CDK5;CYCS;FAS;CDK6;CCNE2;CCNB2;CDC25C;CDC25A;RAD1;CCND2;CCNB1;CCNG1;CCND3
WP186,"Homologous recombination",WikiPathways,BRCA2;MRE11A;POLD1;NBN;RAD51;POLD3;RAD50;RAD54B;POLD4
WP1971,"Integrated Cancer Pathway",WikiPathways,MIR21;CASP9;CASP8;E2F1;BACH1;CDKN1B;CDKN1A;CDK1;BLM;CDKN2B;BBC3;PLK1;MSH6;BAD;RAD50;MAP3K5;PTEN;MMP1;BCL2;MRE11A;BARD1;BRCA1;BAX;CDK2;CHEK1;MSH2;MDM2;CDK4;RB1;JAK1;AKT1;TP53;CDC25B;ATF1;CDC25A;SMAD3;POU2F1;NOXA1;MYC;SMAD2
WP1984,"Integrated Breast Cancer Pathway",WikiPathways,JUN;LGALS13;ESR1;NUP85;HMGCR;ZMIZ1;MSH6;MYCBP2;MAP3K7CL;BRCA2;MMP1;RHEB;BRCA1;MDM2;CYP19A1;CREB1;JAK1;AKT1;TPR;NFKB1;NOXA1;MYC;RAD54L;MIR21;CSNK1D;KRAS;HIPK2;VEGFA;GADD45A;PLK1;ZNF655;RAD50;TGFBR2;TGFBR1;SMAD7;SMAD6;RALGAPA1;BCL2;FOXO1;RALA;PHB;CHEK1;MSH2;PKIA;CDC25B;MAP3K13;CDC25A;ALKBH1;CDC42;PPP4R3A;ODC1;CASP9;CASP8;E2F1;BACH1;SMARCA4;TSC2;AHR;BLM;FADD;FAU;GRN;RAD51;BAD;USP15;TFPI;MRE11A;BARD1;BID;ANXA1;BAX;RB1;IMPA1;FOSL1;APOBEC3G;GDI1;SMAD4;RAC1;SMAD1;MAPK1;SMAD2;EP300;EGFR;STK11;NCOA3;DAG1;AURKA;CTNNB1;RRAS;AR;TRADD;BMPR2;RAP1A;PTEN;BMPR1A;CDK2;CDK4;WEE1;DCAKD;TP53;CDK7;ATF1;IRS1;HDAC1;TAB1
WP2516,"ATM Signaling Pathway",WikiPathways,JUN;SMC1A;NBN;CDKN1A;CDK1;CRADD;GADD45A;RIPK1;RAD51;RAD50;FANCD2;MDC1;MAPK9;MRE11A;BID;MDM4;BRCA1;RAD9A;CDK2;CHEK1;MDM2;CREB1;H2AFX;TP53;TLK1;CDC25C;CDC25A;CCNB1
WP2942,"DDX1 as a regulatory component of the Drosha microprocessor",WikiPathways,MRE11A;NBN;RAD50
WP3878,"ATM Signaling Network in Development and Disease ",WikiPathways,SMC1A;NBN;TSC2;RIF1;STK11;HSPB1;CDK1;RNF8;RAD50;TRIM28;MDC1;MAP3K5;MRE11A;BUB1;CHEK1;HDAC4;H2AFX;CDK5;PPP2R4;AURKB;G6PD;NFKB1;PRKDC;DCLRE1C
WP3959,"DNA IR-Double Strand Breaks (DSBs) and cellular response via ATM",WikiPathways,CASP9;E2F1;RIF1;MCPH1;BLM;RAD51;ACTL6A;TRIM28;MDC1;BRCA2;MRE11A;BID;BRCA1;BAX;RAD9A;MDM2;RASSF1;HSF1;LATS1;PRKDC;EXO1;SMC1A;NBN;SMC3;RNF8;RAD50;FANCD2;PCNA;YAP1;CHEK1;H2AFX;TP53;CDK5;CDC25C;NABP2;DCLRE1C;PARP1
WP438,"Non-homologous end joining",WikiPathways,XRCC4;MRE11A;XRCC5;RAD50;PRKDC
WP707,"DNA Damage Response",WikiPathways,CASP9;CASP8;SFN;E2F1;CDK1;GADD45B;RAD51;MRE11A;BID;BRCA1;RAD9A;BAX;MDM2;CREB1;RB1;PMAIP1;TLK1;GADD45G;PRKDC;MYC;SMC1A;NBN;ATRIP;CDKN1B;CDKN1A;BBC3;GADD45A;RAD50;FANCD2;CDK2;CHEK1;SESN1;CDK4;H2AFX;TP53;CDK5;CYCS;FAS;CDK6;CCNE2;CCNB2;CDC25C;CDC25A;RAD1;CCND2;CCNB1;CCND3