Gene Ontology Description

GO ID GO:0043565
Ontology MF
GO Term sequence-specific DNA binding
Definition Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
Gene Symbol Description Entrez ID Uniprot ID Chromosomal Location

ARNTL

aryl hydrocarbon receptor nuclear translocator like

406

O00327

chr11: 13,276,652-13,387,266

FOXN3

forkhead box N3

1112

O00409

chr14: 89,124,871-89,619,149

NR5A2

nuclear receptor subfamily 5 group A member 2

2494

O00482

chr1: 200,027,602-200,177,424

ZNF213

zinc finger protein 213

7760

O14771

chr16: 3,129,777-3,142,805

FOXP2

forkhead box P2

93986

O15409

chr7: 114,086,327-114,693,772

MAFG

v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G

4097

O15525

chr17: 81,918,270-81,927,714

ZSCAN9

zinc finger and SCAN domain containing 9

7746

O15535

chr6: 28,224,886-28,233,482

HOXA3

homeobox A3

3200

O43365

chr7: 27,106,184-27,152,581

TBX1

T-box 1

6899

O43435

chr22: 19,756,703-19,783,593

FOXO3

forkhead box O3

2309

O43524

chr6: 108,559,835-108,684,774

SNAI2

snail family zinc finger 2

6591

O43623

chr8: 48,917,768-48,921,740

CREBL2

cAMP responsive element binding protein-like 2

1389

O60519

chr12: 12,611,827-12,645,108

EDF1

endothelial differentiation-related factor 1

8721

O60869

chr9: 136,862,119-136,866,286

SHOX2

short stature homeobox 2

6474

O60902

chr3: 158,095,954-158,106,503

MAF

v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog

4094

O75444

chr16: 79,585,843-79,600,714

ZNF205

zinc finger protein 205

7755

O95201

chr16: 3,112,560-3,120,517

WHSC1

Wolf-Hirschhorn syndrome candidate 1

7468

O96028

chr4: 1,871,424-1,982,207

TP53

tumor protein p53

7157

P04637

chr17: 7,661,779-7,687,550

CENPB

centromere protein B

1059

P07199

chr20: 3,783,851-3,786,690

HOXC4

homeobox C4

3221

P09017

chr12: 54,016,931-54,056,030

GLI2

GLI family zinc finger 2

2736

P10070

chr2: 120,735,623-120,992,653

BCL2

B-cell CLL/lymphoma 2

596

P10415

chr18: 63,123,346-63,320,128

NR2F1

nuclear receptor subfamily 2 group F member 1

7025

P10589

chr5: 93,583,337-93,594,615

VDR

vitamin D (1,25- dihydroxyvitamin D3) receptor

7421

P11473

chr12: 47,841,537-47,943,048

ESRRA

estrogen-related receptor alpha

2101

P11474

chr11: 64,305,572-64,316,743

POU2F1

POU class 2 homeobox 1

5451

P14859

chr1: 167,220,829-167,427,345

ETS1

v-ets avian erythroblastosis virus E26 oncogene homolog 1

2113

P14921

chr11: 128,458,761-128,587,558

HIVEP1

human immunodeficiency virus type I enhancer binding protein 1

3096

P15822

chr6: 12,008,762-12,164,999

RAG1

recombination activating gene 1

5896

P15918

chr11: 36,510,709-36,593,156

ZNF24

zinc finger protein 24

7572

P17028

chr18: 35,332,212-35,345,482

ZKSCAN1

zinc finger with KRAB and SCAN domains 1

7586

P17029

chr7: 100,015,572-100,041,689

ATF7

activating transcription factor 7

11016

P17544

chr12: 53,507,856-53,626,410

EGR1

early growth response 1

1958

P18146

chr5: 138,465,490-138,469,315

ATF4

activating transcription factor 4

468

P18848

chr22: 39,519,695-39,522,685

WT1

Wilms tumor 1

7490

P19544

chr11: 32,387,775-32,435,630

NR4A1

nuclear receptor subfamily 4 group A member 1

3164

P22736

chr12: 52,022,832-52,059,507

NR2F2

nuclear receptor subfamily 2 group F member 2

7026

P24468

chr15: 96,325,938-96,340,263

NFYB

nuclear transcription factor Y subunit beta

4801

P25208

chr12: 104,117,077-104,138,289

ARNT

aryl hydrocarbon receptor nuclear translocator

405

P27540

chr1: 150,809,705-150,876,768

HOXD10

homeobox D10

3236

P28358

chr2: 176,108,790-176,119,942

HOXA6

homeobox A6

3203

P31267

chr7: 27,145,396-27,150,603

HIVEP2

human immunodeficiency virus type I enhancer binding protein 2

3097

P31629

chr6: 142,751,467-142,956,698

FOXN2

forkhead box N2

3344

P32314

chr2: 48,314,637-48,379,294

RORA

RAR-related orphan receptor A

6095

P35398

chr15: 60,488,284-61,229,319

SOX6

SRY-box 6

55553

P35712

chr11: 15,966,449-16,739,591

PPARG

peroxisome proliferator-activated receptor gamma

5468

P37231

chr3: 12,287,368-12,434,356

PBX2

pre-B-cell leukemia homeobox 2

5089

P40425

chr6: 32,184,741-32,190,186

BCL6

B-cell CLL/lymphoma 6

604

P41182

chr3: 187,721,377-187,745,727

GATA4

GATA binding protein 4

2626

P43694

chr8: 11,676,959-11,760,002

NOTCH1

notch 1

4851

P46531

chr9: 136,494,444-136,545,862

HOXA1

homeobox A1

3198

P49639

chr7: 27,092,993-27,095,996

MEOX1

mesenchyme homeobox 1

4222

P50221

chr17: 43,640,388-43,661,954

LHX2

LIM homeobox 2

9355

P50458

chr9: 124,001,670-124,033,301

ERF

Ets2 repressor factor

2077

P50548

chr19: 42,247,572-42,255,157

NR0B1

nuclear receptor subfamily 0 group B member 1

190

P51843

chrX: 30,304,206-30,309,598

CEBPG

CCAAT/enhancer binding protein (C/EBP), gamma

1054

P53567

chr19: 33,373,330-33,382,686

FOXG1

forkhead box G1

2290

P55316

chr14: 28,760,330-28,770,277

HDAC4

histone deacetylase 4

9759

P56524

chr2: 239,048,168-239,401,654

MTPN

myotrophin

136319

P58546

chr7: 135,926,761-135,977,353

IRX3

iroquois homeobox 3

79191

P78415

chr16: 54,283,304-54,286,763

SMAD3

SMAD family member 3

4088

P84022

chr15: 67,063,763-67,195,195

FOXO4

forkhead box O4

4303

P98177

chrX: 71,096,197-71,103,535

ZNF200

zinc finger protein 200

7752

P98182

chr16: 3,222,325-3,236,221

E2F1

E2F transcription factor 1

1869

Q01094

chr20: 33,675,683-33,686,404

POU5F1

POU class 5 homeobox 1

5460

Q01860

chr6: 31,164,337-31,180,731

MEF2A

myocyte enhancer factor 2A

4205

Q02078

chr15: 99,565,417-99,716,466

CREB5

cAMP responsive element binding protein 5

9586

Q02930

chr7: 28,299,321-28,825,894

HHEX

hematopoietically expressed homeobox

3087

Q03014

chr10: 92,689,951-92,695,646

POU3F1

POU class 3 homeobox 1

5453

Q03052

chr1: 38,044,611-38,046,794

PPARD

peroxisome proliferator-activated receptor delta

5467

Q03181

chr6: 35,342,558-35,428,191

EMX2

empty spiracles homeobox 2

2018

Q04743

chr10: 117,542,444-117,549,546

PPARA

peroxisome proliferator-activated receptor alpha

5465

Q07869

chr22: 46,150,521-46,243,756

FOXM1

forkhead box M1

2305

Q08050

chr12: 2,857,681-2,877,155

FOXO1

forkhead box O1

2308

Q12778

chr13: 40,469,953-40,666,597

TFCP2

transcription factor CP2

7024

Q12800

chr12: 51,093,663-51,173,134

FOXC1

forkhead box C1

2296

Q12948

chr6: 1,609,972-1,613,897

NR1H3

nuclear receptor subfamily 1 group H member 3

10062

Q13133

chr11: 47,248,300-47,269,032

TRIM28

tripartite motif containing 28

10155

Q13263

chr19: 58,544,091-58,550,722

SMAD4

SMAD family member 4

4089

Q13485

chr18: 51,028,394-51,085,045

CUX1

cut-like homeobox 1

1523

Q13948

chr7: 101,815,904-102,283,957

HES1

hes family bHLH transcription factor 1

3280

Q14469

chr3: 194,136,145-194,138,732

TSN

translin

7247

Q15631

chr2: 121,737,103-121,767,853

USF2

upstream transcription factor 2, c-fos interacting

7392

Q15853

chr19: 35,268,978-35,279,821

SNAPC1

small nuclear RNA activating complex polypeptide 1

6617

Q16533

chr14: 61,762,357-61,796,428

HIF1A

hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)

3091

Q16665

chr14: 61,695,513-61,748,259

ZSCAN26

zinc finger and SCAN domain containing 26

7741

Q16670

chr6: 28,267,010-28,278,224

ZSCAN23

zinc finger and SCAN domain containing 23

222696

Q3MJ62

chr6: 28,431,930-28,443,502

HIVEP3

human immunodeficiency virus type I enhancer binding protein 3

59269

Q5T1R4

chr1: 41,506,365-42,035,925

ZNF449

zinc finger protein 449

203523

Q6P9G9

chrX: 135,344,796-135,363,152

CXXC5

CXXC finger protein 5

51523

Q7LFL8

chr5: 139,647,299-139,683,882

ZBTB33

zinc finger and BTB domain containing 33

10009

Q86T24

chrX: 120,250,752-120,258,398

ZSCAN30

zinc finger and SCAN domain containing 30

100101467

Q86W11

chr18: 35,251,058-35,290,245

CREBRF

CREB3 regulatory factor

153222

Q8IUR6

chr5: 173,056,352-173,139,284

FOXP4

forkhead box P4

116113

Q8IVH2

chr6: 41,546,426-41,602,384

ZNF397

zinc finger protein 397

84307

Q8NF99

chr18: 35,241,030-35,267,133

CTCFL

CCCTC-binding factor (zinc finger protein)-like

140690

Q8NI51

chr20: 57,495,966-57,525,652

GATAD1

GATA zinc finger domain containing 1

57798

Q8WUU5

chr7: 92,447,453-92,458,836

CSRNP3

cysteine-serine-rich nuclear protein 3

80034

Q8WYN3

chr2: 165,469,647-165,689,407

HDAC2

histone deacetylase 2

3066

Q92769

chr6: 113,933,028-114,011,308

CREB3L1

cAMP responsive element binding protein 3-like 1

90993

Q96BA8

chr11: 46,277,661-46,321,422

ZNF274

zinc finger protein 274

10782

Q96GC6

chr19: 58,183,029-58,213,562

ZSCAN31

zinc finger and SCAN domain containing 31

64288

Q96LW9

chr6: 28,324,693-28,356,271

NR1H4

nuclear receptor subfamily 1 group H member 4

9971

Q96RI1

chr12: 100,473,708-100,564,413

CSRNP1

cysteine-serine-rich nuclear protein 1

64651

Q96S65

chr3: 39,141,855-39,154,562

CDC5L

cell division cycle 5 like

988

Q99459

chr6: 44,387,525-44,450,426

MEIS3

Meis homeobox 3

56917

Q99687

chr19: 47,403,124-47,419,523

HNRNPAB

heterogeneous nuclear ribonucleoprotein A/B

3182

Q99729

chr5: 178,204,507-178,211,163

EPAS1

endothelial PAS domain protein 1

2034

Q99814

chr2: 46,293,667-46,386,703

MYBBP1A

MYB binding protein (P160) 1a

10514

Q9BQG0

chr17: 4,538,897-4,555,631

SALL3

spalt-like transcription factor 3

27164

Q9BXA9

chr18: 78,980,275-79,002,677

FOXP3

forkhead box P3

50943

Q9BZS1

chrX: 49,250,436-49,264,826

CSRNP2

cysteine-serine-rich nuclear protein 2

81566

Q9H175

chr12: 51,061,205-51,083,664

IKZF4

IKAROS family zinc finger 4

64375

Q9H2S9

chr12: 56,007,659-56,038,435

FOXP1

forkhead box P1

27086

Q9H334

chr3: 70,954,693-71,583,989

SOX17

SRY-box 17

64321

Q9H6I2

chr8: 54,457,935-54,460,888

ZNF532

zinc finger protein 532

55205

Q9HCE3

chr18: 58,862,600-58,986,480

TCF7L1

transcription factor 7-like 1 (T-cell specific, HMG-box)

83439

Q9HCS4

chr2: 85,133,410-85,310,388

TCF7L2

transcription factor 7-like 2 (T-cell specific, HMG-box)

6934

Q9NQB0

chr10: 112,950,250-113,167,678

THAP1

THAP domain containing, apoptosis associated protein 1

55145

Q9NVV9

chr8: 42,836,674-42,843,325

SLTM

SAFB-like, transcription modulator

79811

Q9NWH9

chr15: 58,879,045-58,933,653

GRHL1

grainyhead-like transcription factor 1

29841

Q9NZI5

chr2: 9,951,693-10,002,277

ZBTB4

zinc finger and BTB domain containing 4

57659

Q9P1Z0

chr17: 7,459,366-7,484,263

RERE

arginine-glutamic acid dipeptide (RE) repeats

473

Q9P2R6

chr1: 8,352,397-8,817,643

PPARGC1A

peroxisome proliferator-activated receptor gamma, coactivator 1 alpha

10891

Q9UBK2

chr4: 23,755,041-23,904,089

MAFF

v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F

23764

Q9ULX9

chr22: 38,200,767-38,216,511

FOXJ3

forkhead box J3

22887

Q9UPW0

chr1: 42,176,539-42,335,877

ZNF148

zinc finger protein 148

7707

Q9UQR1

chr3: 125,225,561-125,375,354

KLF2

Kruppel-like factor 2

10365

Q9Y5W3

chr19: 16,324,817-16,327,874

CHCHD2

coiled-coil-helix-coiled-coil-helix domain containing 2

51142

Q9Y6H1

chr7: 56,101,569-56,106,576

CAMTA1

calmodulin binding transcription activator 1

23261

Q9Y6Y1

chr1: 6,785,324-7,769,706