Gene Ontology Description

GO IDGO:0043565
OntologyMF
GO Termsequence-specific DNA binding
DefinitionInteracting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
Gene SymbolDescriptionEntrez IDUniprot IDChromosomal Location

ARNT

aryl hydrocarbon receptor nuclear translocator

405

P27540

chr1: 150,809,705-150,876,768

ARNTL

aryl hydrocarbon receptor nuclear translocator like

406

O00327

chr11: 13,276,652-13,387,266

ATF4

activating transcription factor 4

468

P18848

chr22: 39,519,695-39,522,685

ATF7

activating transcription factor 7

11016

P17544

chr12: 53,507,856-53,626,410

BCL2

B-cell CLL/lymphoma 2

596

P10415

chr18: 63,123,346-63,320,128

BCL6

B-cell CLL/lymphoma 6

604

P41182

chr3: 187,721,377-187,745,727

CAMTA1

calmodulin binding transcription activator 1

23261

Q9Y6Y1

chr1: 6,785,324-7,769,706

CDC5L

cell division cycle 5 like

988

Q99459

chr6: 44,387,525-44,450,426

CEBPG

CCAAT/enhancer binding protein (C/EBP), gamma

1054

P53567

chr19: 33,373,330-33,382,686

CENPB

centromere protein B

1059

P07199

chr20: 3,783,851-3,786,690

CHCHD2

coiled-coil-helix-coiled-coil-helix domain containing 2

51142

Q9Y6H1

chr7: 56,101,569-56,106,576

CREB3L1

cAMP responsive element binding protein 3-like 1

90993

Q96BA8

chr11: 46,277,661-46,321,422

CREB5

cAMP responsive element binding protein 5

9586

Q02930

chr7: 28,299,321-28,825,894

CREBL2

cAMP responsive element binding protein-like 2

1389

O60519

chr12: 12,611,827-12,645,108

CREBRF

CREB3 regulatory factor

153222

Q8IUR6

chr5: 173,056,352-173,139,284

CSRNP1

cysteine-serine-rich nuclear protein 1

64651

Q96S65

chr3: 39,141,855-39,154,562

CSRNP2

cysteine-serine-rich nuclear protein 2

81566

Q9H175

chr12: 51,061,205-51,083,664

CSRNP3

cysteine-serine-rich nuclear protein 3

80034

Q8WYN3

chr2: 165,469,647-165,689,407

CTCFL

CCCTC-binding factor (zinc finger protein)-like

140690

Q8NI51

chr20: 57,495,966-57,525,652

CUX1

cut-like homeobox 1

1523

Q13948

chr7: 101,815,904-102,283,957

CXXC5

CXXC finger protein 5

51523

Q7LFL8

chr5: 139,647,299-139,683,882

E2F1

E2F transcription factor 1

1869

Q01094

chr20: 33,675,683-33,686,404

EDF1

endothelial differentiation-related factor 1

8721

O60869

chr9: 136,862,119-136,866,286

EGR1

early growth response 1

1958

P18146

chr5: 138,465,490-138,469,315

EMX2

empty spiracles homeobox 2

2018

Q04743

chr10: 117,542,444-117,549,546

EPAS1

endothelial PAS domain protein 1

2034

Q99814

chr2: 46,293,667-46,386,703

ERF

Ets2 repressor factor

2077

P50548

chr19: 42,247,572-42,255,157

ESRRA

estrogen-related receptor alpha

2101

P11474

chr11: 64,305,572-64,316,743

ETS1

v-ets avian erythroblastosis virus E26 oncogene homolog 1

2113

P14921

chr11: 128,458,761-128,587,558

FOXC1

forkhead box C1

2296

Q12948

chr6: 1,609,972-1,613,897

FOXG1

forkhead box G1

2290

P55316

chr14: 28,760,330-28,770,277

FOXJ3

forkhead box J3

22887

Q9UPW0

chr1: 42,176,539-42,335,877

FOXM1

forkhead box M1

2305

Q08050

chr12: 2,857,681-2,877,155

FOXN2

forkhead box N2

3344

P32314

chr2: 48,314,637-48,379,294

FOXN3

forkhead box N3

1112

O00409

chr14: 89,124,871-89,619,149

FOXO1

forkhead box O1

2308

Q12778

chr13: 40,469,953-40,666,597

FOXO3

forkhead box O3

2309

O43524

chr6: 108,559,835-108,684,774

FOXO4

forkhead box O4

4303

P98177

chrX: 71,096,197-71,103,535

FOXP1

forkhead box P1

27086

Q9H334

chr3: 70,954,693-71,583,989

FOXP2

forkhead box P2

93986

O15409

chr7: 114,086,327-114,693,772

FOXP3

forkhead box P3

50943

Q9BZS1

chrX: 49,250,436-49,264,826

FOXP4

forkhead box P4

116113

Q8IVH2

chr6: 41,546,426-41,602,384

GATA4

GATA binding protein 4

2626

P43694

chr8: 11,676,959-11,760,002

GATAD1

GATA zinc finger domain containing 1

57798

Q8WUU5

chr7: 92,447,453-92,458,836

GLI2

GLI family zinc finger 2

2736

P10070

chr2: 120,735,623-120,992,653

GRHL1

grainyhead-like transcription factor 1

29841

Q9NZI5

chr2: 9,951,693-10,002,277

HDAC2

histone deacetylase 2

3066

Q92769

chr6: 113,933,028-114,011,308

HDAC4

histone deacetylase 4

9759

P56524

chr2: 239,048,168-239,401,654

HES1

hes family bHLH transcription factor 1

3280

Q14469

chr3: 194,136,145-194,138,732

HHEX

hematopoietically expressed homeobox

3087

Q03014

chr10: 92,689,951-92,695,646

HIF1A

hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)

3091

Q16665

chr14: 61,695,513-61,748,259

HIVEP1

human immunodeficiency virus type I enhancer binding protein 1

3096

P15822

chr6: 12,008,762-12,164,999

HIVEP2

human immunodeficiency virus type I enhancer binding protein 2

3097

P31629

chr6: 142,751,467-142,956,698

HIVEP3

human immunodeficiency virus type I enhancer binding protein 3

59269

Q5T1R4

chr1: 41,506,365-42,035,925

HNRNPAB

heterogeneous nuclear ribonucleoprotein A/B

3182

Q99729

chr5: 178,204,507-178,211,163

HOXA1

homeobox A1

3198

P49639

chr7: 27,092,993-27,095,996

HOXA3

homeobox A3

3200

O43365

chr7: 27,106,184-27,152,581

HOXA6

homeobox A6

3203

P31267

chr7: 27,145,396-27,150,603

HOXC4

homeobox C4

3221

P09017

chr12: 54,016,931-54,056,030

HOXD10

homeobox D10

3236

P28358

chr2: 176,108,790-176,119,942

IKZF4

IKAROS family zinc finger 4

64375

Q9H2S9

chr12: 56,007,659-56,038,435

IRX3

iroquois homeobox 3

79191

P78415

chr16: 54,283,304-54,286,763

KLF2

Kruppel-like factor 2

10365

Q9Y5W3

chr19: 16,324,817-16,327,874

LHX2

LIM homeobox 2

9355

P50458

chr9: 124,001,670-124,033,301

MAF

v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog

4094

O75444

chr16: 79,585,843-79,600,714

MAFF

v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F

23764

Q9ULX9

chr22: 38,200,767-38,216,511

MAFG

v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G

4097

O15525

chr17: 81,918,270-81,927,714

MEF2A

myocyte enhancer factor 2A

4205

Q02078

chr15: 99,565,417-99,716,466

MEIS3

Meis homeobox 3

56917

Q99687

chr19: 47,403,124-47,419,523

MEOX1

mesenchyme homeobox 1

4222

P50221

chr17: 43,640,388-43,661,954

MTPN

myotrophin

136319

P58546

chr7: 135,926,761-135,977,353

MYBBP1A

MYB binding protein (P160) 1a

10514

Q9BQG0

chr17: 4,538,897-4,555,631

NFYB

nuclear transcription factor Y subunit beta

4801

P25208

chr12: 104,117,077-104,138,289

NOTCH1

notch 1

4851

P46531

chr9: 136,494,444-136,545,862

NR0B1

nuclear receptor subfamily 0 group B member 1

190

P51843

chrX: 30,304,206-30,309,598

NR1H3

nuclear receptor subfamily 1 group H member 3

10062

Q13133

chr11: 47,248,300-47,269,032

NR1H4

nuclear receptor subfamily 1 group H member 4

9971

Q96RI1

chr12: 100,473,708-100,564,413

NR2F1

nuclear receptor subfamily 2 group F member 1

7025

P10589

chr5: 93,583,337-93,594,615

NR2F2

nuclear receptor subfamily 2 group F member 2

7026

P24468

chr15: 96,325,938-96,340,263

NR4A1

nuclear receptor subfamily 4 group A member 1

3164

P22736

chr12: 52,022,832-52,059,507

NR5A2

nuclear receptor subfamily 5 group A member 2

2494

O00482

chr1: 200,027,602-200,177,424

PBX2

pre-B-cell leukemia homeobox 2

5089

P40425

chr6: 32,184,741-32,190,186

POU2F1

POU class 2 homeobox 1

5451

P14859

chr1: 167,220,829-167,427,345

POU3F1

POU class 3 homeobox 1

5453

Q03052

chr1: 38,044,611-38,046,794

POU5F1

POU class 5 homeobox 1

5460

Q01860

chr6: 31,164,337-31,180,731

PPARA

peroxisome proliferator-activated receptor alpha

5465

Q07869

chr22: 46,150,521-46,243,756

PPARD

peroxisome proliferator-activated receptor delta

5467

Q03181

chr6: 35,342,558-35,428,191

PPARG

peroxisome proliferator-activated receptor gamma

5468

P37231

chr3: 12,287,368-12,434,356

PPARGC1A

peroxisome proliferator-activated receptor gamma, coactivator 1 alpha

10891

Q9UBK2

chr4: 23,755,041-23,904,089

RAG1

recombination activating gene 1

5896

P15918

chr11: 36,510,709-36,593,156

RERE

arginine-glutamic acid dipeptide (RE) repeats

473

Q9P2R6

chr1: 8,352,397-8,817,643

RORA

RAR-related orphan receptor A

6095

P35398

chr15: 60,488,284-61,229,319

SALL3

spalt-like transcription factor 3

27164

Q9BXA9

chr18: 78,980,275-79,002,677

SHOX2

short stature homeobox 2

6474

O60902

chr3: 158,095,954-158,106,503

SLTM

SAFB-like, transcription modulator

79811

Q9NWH9

chr15: 58,879,045-58,933,653

SMAD3

SMAD family member 3

4088

P84022

chr15: 67,063,763-67,195,195

SMAD4

SMAD family member 4

4089

Q13485

chr18: 51,028,394-51,085,045

SNAI2

snail family zinc finger 2

6591

O43623

chr8: 48,917,768-48,921,740

SNAPC1

small nuclear RNA activating complex polypeptide 1

6617

Q16533

chr14: 61,762,357-61,796,428

SOX17

SRY-box 17

64321

Q9H6I2

chr8: 54,457,935-54,460,888

SOX6

SRY-box 6

55553

P35712

chr11: 15,966,449-16,739,591

TBX1

T-box 1

6899

O43435

chr22: 19,756,703-19,783,593

TCF7L1

transcription factor 7-like 1 (T-cell specific, HMG-box)

83439

Q9HCS4

chr2: 85,133,410-85,310,388

TCF7L2

transcription factor 7-like 2 (T-cell specific, HMG-box)

6934

Q9NQB0

chr10: 112,950,250-113,167,678

TFCP2

transcription factor CP2

7024

Q12800

chr12: 51,093,663-51,173,134

THAP1

THAP domain containing, apoptosis associated protein 1

55145

Q9NVV9

chr8: 42,836,674-42,843,325

TP53

tumor protein p53

7157

P04637

chr17: 7,661,779-7,687,550

TRIM28

tripartite motif containing 28

10155

Q13263

chr19: 58,544,091-58,550,722

TSN

translin

7247

Q15631

chr2: 121,737,103-121,767,853

USF2

upstream transcription factor 2, c-fos interacting

7392

Q15853

chr19: 35,268,978-35,279,821

VDR

vitamin D (1,25- dihydroxyvitamin D3) receptor

7421

P11473

chr12: 47,841,537-47,943,048

WHSC1

Wolf-Hirschhorn syndrome candidate 1

7468

O96028

chr4: 1,871,424-1,982,207

WT1

Wilms tumor 1

7490

P19544

chr11: 32,387,775-32,435,630

ZBTB33

zinc finger and BTB domain containing 33

10009

Q86T24

chrX: 120,250,752-120,258,398

ZBTB4

zinc finger and BTB domain containing 4

57659

Q9P1Z0

chr17: 7,459,366-7,484,263

ZKSCAN1

zinc finger with KRAB and SCAN domains 1

7586

P17029

chr7: 100,015,572-100,041,689

ZNF148

zinc finger protein 148

7707

Q9UQR1

chr3: 125,225,561-125,375,354

ZNF200

zinc finger protein 200

7752

P98182

chr16: 3,222,325-3,236,221

ZNF205

zinc finger protein 205

7755

O95201

chr16: 3,112,560-3,120,517

ZNF213

zinc finger protein 213

7760

O14771

chr16: 3,129,777-3,142,805

ZNF24

zinc finger protein 24

7572

P17028

chr18: 35,332,212-35,345,482

ZNF274

zinc finger protein 274

10782

Q96GC6

chr19: 58,183,029-58,213,562

ZNF397

zinc finger protein 397

84307

Q8NF99

chr18: 35,241,030-35,267,133

ZNF449

zinc finger protein 449

203523

Q6P9G9

chrX: 135,344,796-135,363,152

ZNF532

zinc finger protein 532

55205

Q9HCE3

chr18: 58,862,600-58,986,480

ZSCAN23

zinc finger and SCAN domain containing 23

222696

Q3MJ62

chr6: 28,431,930-28,443,502

ZSCAN26

zinc finger and SCAN domain containing 26

7741

Q16670

chr6: 28,267,010-28,278,224

ZSCAN30

zinc finger and SCAN domain containing 30

100101467

Q86W11

chr18: 35,251,058-35,290,245

ZSCAN31

zinc finger and SCAN domain containing 31

64288

Q96LW9

chr6: 28,324,693-28,356,271

ZSCAN9

zinc finger and SCAN domain containing 9

7746

O15535

chr6: 28,224,886-28,233,482