| GO ID | GO:0006283 |
| Ontology | BP |
| GO Term | transcription-coupled nucleotide-excision repair |
| Definition | The nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway. |
| Gene Symbol | Description | Entrez ID | Uniprot ID | Chromosomal Location |
|---|---|---|---|---|
|
POLR2D |
polymerase (RNA) II (DNA directed) polypeptide D |
5433 |
O15514 |
chr2: 127,843,551-127,858,157 |
|
ERCC1 |
excision repair cross-complementation group 1 |
2067 |
P07992 |
chr19: 45,407,333-45,478,828 |
|
UBC |
ubiquitin C |
7316 |
P0CG48 |
chr12: 124,911,604-124,917,368 |
|
PCNA |
proliferating cell nuclear antigen |
5111 |
P12004 |
chr20: 5,114,953-5,126,626 |
|
ERCC2 |
excision repair cross-complementation group 2 |
2068 |
P18074 |
chr19: 45,349,837-45,370,918 |
|
LIG1 |
ligase I, DNA, ATP-dependent |
3978 |
P18858 |
chr19: 48,115,445-48,170,603 |
|
POLR2E |
polymerase (RNA) II (DNA directed) polypeptide E, 25kDa |
5434 |
P19388 |
chr19: 1,086,579-1,095,380 |
|
XPA |
xeroderma pigmentosum, complementation group A |
7507 |
P23025 |
chr9: 97,674,909-97,697,357 |
|
POLR2A |
polymerase (RNA) II (DNA directed) polypeptide A, 220kDa |
5430 |
P24928 |
chr17: 7,484,366-7,514,616 |
|
POLD1 |
polymerase (DNA directed), delta 1, catalytic subunit |
5424 |
P28340 |
chr19: 50,384,204-50,418,018 |
|
POLR2B |
polymerase (RNA) II (DNA directed) polypeptide B, 140kDa |
5431 |
P30876 |
chr4: 56,977,722-57,031,168 |
|
GTF2H1 |
general transcription factor IIH subunit 1 |
2965 |
P32780 |
chr11: 18,322,295-18,367,044 |
|
RPA3 |
replication protein A3 |
6119 |
P35244 |
chr7: 7,636,518-7,718,607 |
|
RFC4 |
replication factor C subunit 4 |
5984 |
P35249 |
chr3: 186,789,880-186,807,058 |
|
RFC2 |
replication factor C subunit 2 |
5982 |
P35250 |
chr7: 74,231,499-74,254,458 |
|
POLR2I |
polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa |
5438 |
P36954 |
chr19: 36,113,710-36,115,346 |
|
RFC5 |
replication factor C subunit 5 |
5985 |
P40937 |
chr12: 118,013,588-118,033,130 |
|
RFC3 |
replication factor C subunit 3 |
5983 |
P40938 |
chr13: 33,818,049-33,966,558 |
|
CDK7 |
cyclin-dependent kinase 7 |
1022 |
P50613 |
chr5: 69,234,795-69,277,430 |
|
POLR2J |
polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa |
5439 |
P52435 |
chr7: 102,473,118-102,478,907 |
|
POLR2K |
polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa |
5440 |
P53803 |
chr8: 100,150,584-100,154,002 |
|
POLR2G |
polymerase (RNA) II (DNA directed) polypeptide G |
5436 |
P62487 |
chr11: 62,761,544-62,766,710 |
|
POLR2L |
polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa |
5441 |
P62875 |
chr11: 837,356-842,545 |
|
RBX1 |
ring-box 1, E3 ubiquitin protein ligase |
9978 |
P62877 |
chr22: 40,951,347-40,973,309 |
|
RPS27A |
ribosomal protein S27a |
6233 |
P62979 |
chr2: 55,231,903-55,235,853 |
|
UBA52 |
ubiquitin A-52 residue ribosomal protein fusion product 1 |
7311 |
P62987 |
chr19: 18,571,730-18,577,550 |
|
EP300 |
E1A binding protein p300 |
2033 |
Q09472 |
chr22: 41,091,786-41,180,079 |
|
CUL4A |
cullin 4A |
8451 |
Q13619 |
chr13: 113,208,193-113,267,108 |
|
CUL4B |
cullin 4B |
8450 |
Q13620 |
chrX: 120,524,609-120,575,794 |
|
GTF2H2 |
general transcription factor IIH subunit 2 |
2966 |
Q13888 |
chr5: 71,032,670-71,067,689 |
|
POLD3 |
polymerase (DNA-directed), delta 3, accessory subunit |
10714 |
Q15054 |
chr11: 74,493,851-74,669,117 |
|
COPS6 |
COP9 signalosome subunit 6 |
10980 |
Q7L5N1 |
chr7: 100,088,954-100,092,200 |
|
GTF2H4 |
general transcription factor IIH subunit 4 |
2968 |
Q92759 |
chr6: 30,908,184-30,914,106 |
|
ERCC4 |
excision repair cross-complementation group 4 |
2072 |
Q92889 |
chr16: 13,920,157-13,952,345 |
|
COPS8 |
COP9 signalosome subunit 8 |
10920 |
Q99627 |
chr2: 237,085,312-237,100,466 |
|
COPS7B |
COP9 signalosome subunit 7B |
64708 |
Q9H9Q2 |
chr2: 231,781,671-231,809,254 |
|
POLD4 |
polymerase (DNA-directed), delta 4, accessory subunit |
57804 |
Q9HCU8 |
chr11: 67,350,777-67,356,972 |
|
POLK |
polymerase (DNA directed) kappa |
51426 |
Q9UBT6 |
chr5: 75,511,756-75,601,144 |
|
PRPF19 |
pre-mRNA processing factor 19 |
27339 |
Q9UMS4 |
chr11: 60,890,730-60,906,588 |
|
PPIE |
peptidylprolyl isomerase E (cyclophilin E) |
10450 |
Q9UNP9 |
chr1: 39,692,182-39,763,914 |